| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 256532 | 170 (0.830) | 30 (0.180) | 14/132 | NT | 16.4% | intergenic (+277/+82) | uhpT/USA300HOU_RS01135 | Hexose‑6‑phosphate:phosphate antiporter/putative response regulatory protein |
| ? | USA300TCH1516_ALE | = 256554 | 167 (1.000) | intergenic (+299/+60) | uhpT/USA300HOU_RS01135 | Hexose‑6‑phosphate:phosphate antiporter/putative response regulatory protein | |||||
Only 100 of 308 total aligned reads displayed.
ATGAATTTACTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGC > USA300TCH1516_ALE/256442‑256622 | aTGAATTTACTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGA > 2:2289058‑M1/1‑91 (MQ=255) tGAATTTACTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTgaa > 2:3215810/1‑91 (MQ=255) tttACTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTgaaagaa < 1:289388/91‑1 (MQ=255) aCTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAg > 1:3424089/1‑91 (MQ=255) cTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGt < 1:472242/91‑1 (MQ=255) tCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTg < 1:1609400/91‑1 (MQ=255) ccTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGa < 1:1179288/91‑1 (MQ=255) ttACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGaaa < 1:2694452/91‑1 (MQ=255) tACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTTaaaa > 1:713385/1‑91 (MQ=255) tACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGaaaa < 2:624426/91‑1 (MQ=255) tACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGaaaa > 1:3645526/1‑91 (MQ=255) cAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACt < 2:192356/91‑1 (MQ=255) cAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACt < 1:2313675/91‑1 (MQ=255) aaaGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttc < 1:916968‑M1/91‑21 (MQ=255) aaaGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttc < 1:3305938‑M1/91‑21 (MQ=255) aGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTCTATTTAAACTCTCTAAAAAGCGGACAGAAAGAAAAGTGAAAACTTCTCTa > 2:3668443/1‑91 (MQ=255) aGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctt < 2:1480814‑M1/91‑23 (MQ=255) aGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctt < 2:537481‑M1/91‑23 (MQ=255) aCATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctttc < 1:1451365‑M1/91‑25 (MQ=255) aCATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtc < 1:1737274‑M2/91‑3 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctttcag < 1:110105‑M1/91‑27 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcag > 1:810878‑M2/1‑87 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcag < 1:3822021‑M2/91‑5 (MQ=255) tataGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagt > 1:2398160‑M2/1‑86 (MQ=255) tataGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagt < 2:2888408‑M2/91‑6 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctttcagtcc < 1:797809‑M1/91‑30 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc < 2:1107022‑M2/91‑8 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc < 2:3539900‑M2/91‑8 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc > 1:1330530‑M2/1‑84 (MQ=255) tgtCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttt > 1:602057‑M2/1‑78 (MQ=255) cAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCa < 1:2422731/91‑1 (MQ=255) aaTATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCAt > 2:3939447/1‑91 (MQ=255) aaTATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCAt < 1:17216/91‑1 (MQ=255) aaTATTGTAGGGAGTATTGGGTTATATGTAAACTCGCGAAGGAGCGGACGGAAAGAAAAGTGAAAGCTGCGCTATCAGTCCGCGTGTTCAt < 2:519153/91‑1 (MQ=255) atatTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATa < 2:3347318/91‑1 (MQ=255) tGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtt < 1:2631799‑M1/91‑45 (MQ=255) gTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACa > 2:3546793/1‑91 (MQ=255) aGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaa < 2:1247981/91‑1 (MQ=255) gggAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaaa > 2:2451873/1‑91 (MQ=255) gggAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaaa > 1:2560600/1‑91 (MQ=255) ggAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAAt < 1:1887086/91‑1 (MQ=255) gTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGa > 1:185839/1‑91 (MQ=255) tATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCT‑Tcagtccgctttttagagagtttaaatataaaa > 1:2069797‑M2/1‑59 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 2:2570197/91‑1 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 2:73783/91‑1 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc > 2:877519/1‑91 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 1:2229671/91‑1 (MQ=255) ttttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGcc < 1:3235232/91‑1 (MQ=255) tttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTACAAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCa > 2:3042423/1‑91 (MQ=255) ttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCAt < 2:838651/91‑1 (MQ=255) tataTTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAGAATGGAGGCGCCATa < 1:3369267/91‑1 (MQ=255) tataTTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATa < 1:3606465/91‑1 (MQ=255) atatTTAAACTCTCTAAAGAGCGGACTGAAAGAAAAGTGAAAACTGCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATaa < 2:2323700/91‑1 (MQ=255) atTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATc > 1:3748669/1‑91 (MQ=255) tttAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCa < 1:3057073/91‑1 (MQ=255) tttAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCa < 2:1346314/91‑1 (MQ=255) ttAAACTCTCTAAAAAGCGGTCTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCcatcatcat > 2:3893694/1‑91 (MQ=255) tAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAtt > 2:2091617/1‑91 (MQ=255) tAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAtt > 1:377224/1‑91 (MQ=255) aaCTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctaca < 1:2841616‑M2/91‑48 (MQ=255) aaCTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctaca < 1:2632047‑M2/91‑48 (MQ=255) aaCTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAg < 1:1811331/91‑1 (MQ=255) tctAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTAtg < 1:2994457/91‑1 (MQ=255) ctAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTAtgt < 2:691206/91‑1 (MQ=255) aaaaaGCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattggc < 2:3196890‑M1/91‑78 (MQ=255) aaaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGc < 2:2656765/91‑1 (MQ=255) aaaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGc < 1:2805165/91‑1 (MQ=255) aaaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGc < 1:10186/91‑1 (MQ=255) aaaaGCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgaca < 2:2913582‑M1/91‑79 (MQ=255) aaaaGCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgaca > 1:601946‑M1/1‑13 (MQ=255) aaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCt > 2:3078144/1‑91 (MQ=255) aaaGCGGACTGATAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTa < 2:3282379/91‑1 (MQ=255) aaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTaa < 2:3817301/91‑1 (MQ=255) aGCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccg < 1:2841855‑M1/91‑82 (MQ=255) aGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAAt > 1:1271444/1‑91 (MQ=255) aGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCATTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAAt < 2:3466237/91‑1 (MQ=255) gCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgc > 1:3101430‑M1/1‑9 (MQ=255) gCGGACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgc > 1:2485055‑M1/1‑9 (MQ=255) gCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATc > 2:1056024/1‑91 (MQ=255) cGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCt < 2:2753221/91‑1 (MQ=255) cGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCt > 2:1555834/1‑91 (MQ=255) ggACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgcta > 2:1043211‑M1/1‑7 (MQ=255) ggACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgcta < 1:2307378‑M1/91‑85 (MQ=255) ggACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTa < 1:649597/91‑1 (MQ=255) gACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctat < 2:2070454‑M1/91‑86 (MQ=255) gACTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctat < 1:1301935‑M1/91‑86 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctat < 1:979828‑M2/91‑64 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAt > 2:3399249/1‑91 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAt > 2:3626947/1‑91 (MQ=255) aCTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctata > 1:1159256‑M1/1‑5 (MQ=255) aCTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAtt > 2:3517906/1‑91 (MQ=255) aCTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTCTTTCATAGCACAAAATGGAGGAGCCATAATCATTAGTTATGTGCTAATCTAtt > 1:3157763/1‑91 (MQ=255) cTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatat > 2:1071915‑M1/1‑4 (MQ=255) cTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatat < 2:2219004‑M1/91‑88 (MQ=255) cTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatat > 1:1525269‑M1/1‑4 (MQ=255) cTGAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatat > 2:2554917‑M1/1‑4 (MQ=255) gaaagaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgt < 2:2630758‑M2/91‑68 (MQ=255) gaaagaaaAGTGAAAACTTCTCTAtcagtccgctttatagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgt < 2:1700910‑M2/91‑68 (MQ=255) gAtagagaagttttcacttttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgt < 1:861358‑M1/91‑90 (MQ=255) atagagaagttttcacatttctttcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtc < 2:3772532‑M1/91‑91 (MQ=255) | ATGAATTTACTCCTTACAATAAAGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGC > USA300TCH1516_ALE/256442‑256622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |