| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 256532 | 170 (0.830) | 30 (0.180) | 14/132 | NT | 16.4% | intergenic (+277/+82) | uhpT/USA300HOU_RS01135 | Hexose‑6‑phosphate:phosphate antiporter/putative response regulatory protein |
| ? | USA300TCH1516_ALE | = 256554 | 167 (1.000) | intergenic (+299/+60) | uhpT/USA300HOU_RS01135 | Hexose‑6‑phosphate:phosphate antiporter/putative response regulatory protein | |||||
Only 100 of 273 total aligned reads displayed.
AGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTGGC > USA300TCH1516_ALE/256464‑256644 | aGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTCTATTTAAACTCTCTAAAAAGCGGACAGAAAGAAAAGTGAAAACTTCTCTa > 2:3668443/1‑91 (MQ=255) aCATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtc < 1:1737274‑M2/91‑3 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcag < 1:211586‑M2/91‑5 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcag < 1:3822021‑M2/91‑5 (MQ=255) atatAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcag < 2:2219004‑M2/91‑5 (MQ=255) tataGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagt > 1:1159256‑M2/1‑86 (MQ=255) tataGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagt < 2:2888408‑M2/91‑6 (MQ=255) tataGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagt > 1:2398160‑M2/1‑86 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc > 2:1043211‑M2/1‑84 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc < 2:3539900‑M2/91‑8 (MQ=255) taGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtcc > 1:1330530‑M2/1‑84 (MQ=255) aGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccg < 2:521494‑M2/91‑9 (MQ=255) gCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgc > 1:127346‑M2/1‑82 (MQ=255) cGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgct < 1:2841855‑M2/91‑11 (MQ=255) ggTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctt < 2:264254‑M2/91‑12 (MQ=255) tgtCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttt < 2:2913582‑M2/91‑14 (MQ=255) cAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCa < 1:2422731/91‑1 (MQ=255) cAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCa > 1:1812800/1‑91 (MQ=255) cAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCa < 1:538440/91‑1 (MQ=255) atatTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATa < 2:3347318/91‑1 (MQ=255) tatTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAg > 1:1096501/1‑91 (MQ=255) tatTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAg > 2:332570/1‑91 (MQ=255) ttGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGaa < 2:3618218/91‑1 (MQ=255) tGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAAc < 2:611543/91‑1 (MQ=255) aGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaa < 2:1247981/91‑1 (MQ=255) aGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaa < 2:2067536/91‑1 (MQ=255) gggAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACaaaa > 2:2451873/1‑91 (MQ=255) gAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATg < 2:3790633/91‑1 (MQ=255) aGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATgg > 2:2510631/1‑91 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCCGTCCGCTTTTTCATAGAACACAATGGAGgc > 2:2344873/1‑91 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 2:2570197/91‑1 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 1:704646/91‑1 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 1:2229748/91‑1 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc > 1:816590/1‑91 (MQ=255) ttGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGgc < 2:73783/91‑1 (MQ=255) ttttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGcc < 1:3235232/91‑1 (MQ=255) tttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCa < 1:1877316/91‑1 (MQ=255) tttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCa > 2:3042481/1‑91 (MQ=255) ttATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCAt < 2:838652/91‑1 (MQ=255) tttAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCa < 2:1346314/91‑1 (MQ=255) tttAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCa < 1:3057593/91‑1 (MQ=255) ttAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAt < 1:388212/91‑1 (MQ=255) tAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAtt > 1:377224/1‑91 (MQ=255) tAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAtt > 2:2091617/1‑91 (MQ=255) tAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCAtt < 1:3619959/91‑1 (MQ=255) tctctAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTa < 2:1161667/91‑1 (MQ=255) tAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTAtgtg > 1:628709/1‑91 (MQ=255) aaaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGc < 1:10186/91‑1 (MQ=255) aaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCt > 2:3078552/1‑91 (MQ=255) aaaaGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCt > 2:3390974/1‑91 (MQ=255) aGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAAt < 1:3480499/91‑1 (MQ=255) gCGTACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATc < 2:1543688/91‑1 (MQ=255) gCGGACTGAAAGAAAAGTGAAAACTCCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATCTGCTCATc > 2:1056161/1‑91 (MQ=255) cGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCt < 2:2753221/91‑1 (MQ=255) ggACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgcta < 1:3656916‑M2/91‑63 (MQ=255) ggACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgcta < 1:797809‑M2/91‑63 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctat < 1:979828‑M2/91‑64 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAt > 1:2649736/1‑91 (MQ=255) gACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAt < 1:2929497/91‑1 (MQ=255) aCTGAAAGAAAAGTGAAAACTTCTCTATCAGTCTGCTATTTCATAGCACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTAtt > 1:3156876/1‑91 (MQ=255) tGAAATAAGAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGCGGCGCCATAATCATTAGTTATGTGCTAATCTAtttt < 2:3651561/91‑1 (MQ=255) gaaagaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgt < 1:26273‑M2/91‑68 (MQ=255) gaaagaaaAGTGAAAACTTCTCTAtcagtccgctttatagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgt < 2:1700910‑M2/91‑68 (MQ=255) aagaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtct < 2:1480814‑M2/91‑70 (MQ=255) aagaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtct < 2:3488108‑M2/91‑70 (MQ=255) agaaaAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTttgctt > 2:474237/1‑91 (MQ=255) gaaaAGTGAAAACTTCTCTTtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtcttt < 1:2279019‑M2/91‑72 (MQ=255) gaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtcttt < 1:3305938‑M2/91‑72 (MQ=255) gaaaAGTGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtcttt < 2:193262‑M2/91‑72 (MQ=255) gaaaAGTGAAAACTTCTCTAACAGTCCGCTTTGTCATAGAACAAAATGGCGGCGCCATAATCATTAGTTATGTGCTAATCTATTttgcttg > 2:3464997/1‑91 (MQ=255) aaaGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTtgcttgct < 1:2801117/91‑1 (MQ=255) aaGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTgcttgctt < 1:1262634/91‑1 (MQ=255) aaGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCCATTTTgcttgctt > 1:916671/1‑91 (MQ=255) aGTGAAAACTTCTCTATCAGTCCGCTTTTTCTTTTAACTAAATTGTAGCGCCATAATCATTAGTTCTGTTCTATTCTGTTGTgcttgcttt > 2:302884/1‑90 (MQ=255) aGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTCTTTTGCTTGCTTa > 2:327035/1‑91 (MQ=255) aGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTa > 1:1837465/1‑91 (MQ=255) aGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTa > 2:272700/1‑91 (MQ=255) gTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTAc > 1:1430378/1‑91 (MQ=255) gTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTAc < 1:2439018/91‑1 (MQ=255) tGAAAACTTCTCTCTCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAACCATTAGTTATGTGCTAACCTATTTTGCTTGCTTAcc > 2:3914562/1‑90 (MQ=255) tGAAAACTTCTCTAtcagtccgctttttagagagtttaaatataaaacaatactccctacaatattgacaccgctatatgtctttattgta < 2:3849925‑M2/91‑78 (MQ=255) tGAAAACTTCTCTATCAGTCCGCTTTTTCATAGATCAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACa > 2:1096180/1‑91 (MQ=255) tGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACa > 2:814478/1‑91 (MQ=255) tGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACa > 2:3889680/1‑91 (MQ=255) tGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAACCATTAGTTATGTACAAATCAATTATGCTTGCTTACa > 2:2298828/1‑91 (MQ=255) gAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACaa > 1:1517693/1‑91 (MQ=255) gAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACaa > 1:159196/1‑91 (MQ=255) aaaaCTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACaat < 1:2610430/91‑1 (MQ=255) aaaCTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACaata < 2:685300/91‑1 (MQ=255) aaaCTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACaata < 2:936010/91‑1 (MQ=255) tctcTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCAc > 1:3178629/1‑91 (MQ=255) tctcTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCAc > 1:2538101/1‑91 (MQ=255) ctctATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACt > 1:2061695/1‑91 (MQ=255) ctctATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACt < 1:3000925/91‑1 (MQ=255) tctATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACtt < 1:2869508/91‑1 (MQ=255) ctATCAGTCCGCTTTTTTATAGATTATAATGGAGGCGCCATAATCATTAGTTATGTGCTATTCTATTTTGCTTGCTTACAATAATCACttt > 2:1780884/1‑90 (MQ=255) ctATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTg > 2:1646645/1‑91 (MQ=255) aTCAGTCCGCTTTTTCATAGAACAAAATGGATGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTGGc < 2:883682/91‑1 (MQ=255) aTCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTGGc < 1:1464293/91‑1 (MQ=255) aTCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTGGc < 1:2814416/91‑1 (MQ=255) | AGACATATAGCGGTGTCAATATTGTAGGGAGTATTGTTTTATATTTAAACTCTCTAAAAAGCGGACTGAAAGAAAAGTGAAAACTTCTCTATCAGTCCGCTTTTTCATAGAACAAAATGGAGGCGCCATAATCATTAGTTATGTGCTAATCTATTTTGCTTGCTTACAATAATCACTTGGC > USA300TCH1516_ALE/256464‑256644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |