| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 263532 | 162 (0.800) | 21 (0.120) | 12/140 | NT | 12.4% | intergenic (+31/‑305) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic |
| ? | USA300TCH1516_ALE | = 263550 | 155 (0.870) | intergenic (+49/‑287) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic | |||||
Only 100 of 321 total aligned reads displayed.
GCTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAA > USA300TCH1516_ALE/263442‑263622 | gTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAAc < 1:1323044/91‑1 (MQ=255) tAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACtt > 2:2916375/1‑91 (MQ=255) aaaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTc > 2:2647359/1‑91 (MQ=255) aaaGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTc > 2:661435/1‑91 (MQ=255) agcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGTATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAagag < 1:3348867/91‑1 (MQ=255) agcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCcccttcactct < 1:932198‑M1/91‑12 (MQ=255) agcCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAagag < 1:3291669/91‑1 (MQ=255) cTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGa < 1:2051974/91‑1 (MQ=255) tACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGaa > 1:3716380/1‑91 (MQ=255) aCCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAG‑AAGCATATGCcccttcactcttgaagt < 2:3750765‑M1/91‑18 (MQ=255) ccGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAgg < 2:2493641/91‑1 (MQ=255) ccGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAgg < 2:2713359/91‑1 (MQ=255) ttgtagaagttgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAgggg > 1:2916252‑M1/58‑91 (MQ=255) cGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAggg > 1:1087476/1‑91 (MQ=255) gTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGg < 2:3503169‑M2/91‑2 (MQ=255) ttATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgc > 1:3241869‑M2/1‑89 (MQ=255) aTGTTAACTTCAAGGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAGAGCAAGCATATGCcccttcactcttgaagttgcat < 2:2964818‑M1/91‑23 (MQ=255) aTGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcat < 2:424884‑M2/91‑5 (MQ=255) tGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcata < 1:2333685‑M2/91‑6 (MQ=255) gTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatat > 1:1824882‑M2/1‑85 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGTAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 2:2964137‑M2/1‑84 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 1:1204868‑M2/1‑84 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgc > 2:1169422‑M2/1‑83 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAG‑AAGCATATGCcccttcactcttgaagttgcatatgct < 1:2570627‑M1/91‑28 (MQ=255) gttgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGc > 1:1308176‑M1/50‑91 (MQ=255) ttgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGct > 1:313056‑M1/49‑91 (MQ=255) ttgactcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAGGGGCATATGctt > 1:3065756‑M1/49‑91 (MQ=255) taCTTCAACGGGAATTTTCCCTTTGAATTATAAATACAATTCAGACCAAAACGAAAGCATATGCAACTTCAACAGTGAAGCGGCACACGct > 2:2336879/2‑91 (MQ=25) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgct < 2:2274461‑M2/91‑10 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgct < 2:3827550‑M2/91‑10 (MQ=255) aaCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAAGAAGCATATGCcccttcactcttgaagttgcatatgct < 2:2310751‑M1/91‑28 (MQ=255) tgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGctt > 1:3591980‑M1/48‑91 (MQ=255) tgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc > 1:1166041‑M1/48‑91 (MQ=255) aCTTCAAAGGGAAGATTCCCGTTGAATTATAGATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt > 2:1331737‑M2/1‑81 (MQ=255) aCTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGCAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt < 1:3952107‑M2/91‑11 (MQ=255) cTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc < 1:2954408/91‑1 (MQ=255) ttCAACGGGAATTTTCCCTTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttct > 2:1039313/1‑91 (MQ=38) ttCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttct < 2:815192/91‑1 (MQ=255) ttCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttct < 1:3830886/91‑1 (MQ=255) ttCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttct < 1:2209193/91‑1 (MQ=255) aaaGGGAAAATTCCCGTTGAATTATACATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCtttt > 2:2240356/1‑91 (MQ=255) aaaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCtttt < 1:113339/91‑1 (MQ=255) aaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCttttt > 1:1023112/1‑91 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAatt < 1:265555/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattg < 1:41781/91‑1 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 1:1231287/1‑91 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 2:2020390/1‑91 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 1:3870796/1‑91 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattga > 1:316069/1‑91 (MQ=255) ttCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagt < 1:188499/91‑1 (MQ=255) tCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagta < 2:567325/91‑1 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtat > 2:161543/1‑91 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtat < 2:1588222/91‑1 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtat > 1:1458966/1‑91 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtat < 1:1253007/91‑1 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt > 2:3139131/1‑91 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtatt > 2:1024597/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattg < 1:175212/91‑1 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattg > 1:64281/1‑91 (MQ=255) gTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattga > 2:111065/1‑91 (MQ=255) ttGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAattgagtattgag < 1:1384222/91‑1 (MQ=255) gAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAAttgagtattgagta < 1:2131732/91‑1 (MQ=255) aaTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATtgagtattgagtat < 1:2835888/91‑1 (MQ=255) aTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTgagtattgagtatt > 1:3919522/1‑91 (MQ=255) tataAATACAATTCAGACTGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAg > 2:1824066/1‑91 (MQ=255) ataAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGc > 1:1102825/1‑91 (MQ=255) ataAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGc > 2:2104207/1‑91 (MQ=255) aaaTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCaa > 1:85264/1‑91 (MQ=255) aTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGa > 1:803397/1‑91 (MQ=255) aTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGa < 1:2701293/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 1:2520949/91‑1 (MQ=255) tACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGAc < 2:3955464/91‑1 (MQ=255) cAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgt < 2:2610135/91‑1 (MQ=255) agtCAGGCCGAAAATAAAGCATATGCAAGTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTATCAAGACgtag < 2:693517/89‑1 (MQ=255) tCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagta > 2:1658182/1‑91 (MQ=255) tCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagta < 2:2745734/91‑1 (MQ=255) tCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagta > 1:3479330/1‑91 (MQ=255) aGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaag < 1:983888/91‑1 (MQ=255) aCCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaagta > 2:869088/1‑91 (MQ=255) AGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgaga < 1:1587385‑M1/91‑1 (MQ=255) AAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACaa < 2:1370823‑M1/91‑1 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc < 2:1249232/91‑1 (MQ=255) gCATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtta > 2:2442406‑M1/1‑8 (MQ=255) gCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 1:2869149/1‑91 (MQ=255) gCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt < 1:550763/91‑1 (MQ=255) cATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaa < 1:2773791‑M1/91‑85 (MQ=255) cATATGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaa < 1:2420340‑M1/91‑85 (MQ=255) atatGTAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTc < 1:2453824/91‑1 (MQ=255) atatGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaac > 1:2903925‑M1/1‑6 (MQ=255) atatGCAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaac < 1:3746518‑M2/91‑68 (MQ=255) tatGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaaca < 2:1390449‑M1/91‑87 (MQ=255) tatGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaaca < 1:2486292‑M1/91‑87 (MQ=255) tatGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTATCAAGACGTAGTAAGTATATGAGACAACTTCt < 2:3010849/91‑1 (MQ=255) atGCcccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacat > 2:1458553‑M1/1‑4 (MQ=255) atGCAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtctttataattcaacgggaattttccctttgaggttaacat < 2:1912297‑M2/91‑70 (MQ=255) atGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTa > 2:3079747/1‑91 (MQ=255) tGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTAc > 1:1450084/1‑91 (MQ=255) tcAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACa < 2:3334338/90‑1 (MQ=255) ccccttcactcttgaagttgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataac < 2:1411501‑M1/91‑91 (MQ=255) cAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataac < 1:3098100‑M2/91‑73 (MQ=255) | GCTGTTAAAGCAGCCTACCGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAA > USA300TCH1516_ALE/263442‑263622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |