| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 263532 | 162 (0.800) | 21 (0.120) | 12/140 | NT | 12.4% | intergenic (+31/‑305) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic |
| ? | USA300TCH1516_ALE | = 263550 | 155 (0.870) | intergenic (+49/‑287) | pflA/ugpQ_2 | Pyruvate formate‑lyase‑activating enzyme/Glycerophosphodiester phosphodiesterase, cytoplasmic | |||||
Only 100 of 284 total aligned reads displayed.
CGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACGTT > USA300TCH1516_ALE/263460‑263640 | ttgtagaagttgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAgggg > 1:2916252‑M1/58‑91 (MQ=255)cGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAggg > 1:1087655/1‑91 (MQ=255) tgtagaagttgtatcatatacatactacgtcttgctaatactcaatactccattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAGGGGc > 1:177995‑M1/57‑91 (MQ=255) gTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGg < 2:1411501‑M2/91‑2 (MQ=255) gTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGg < 2:3503169‑M2/91‑2 (MQ=255) aTGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcat < 2:424884‑M2/91‑5 (MQ=255) gTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatat > 2:2070553‑M2/1‑85 (MQ=255) ttAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGTAAGCATATGCAACTTCAAGAGTGAAGGGgcatatg > 2:2964137‑M2/1‑84 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgc > 2:2442406‑M2/1‑83 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgc > 1:94782‑M2/1‑83 (MQ=255) tAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgc > 1:3930838‑M2/1‑83 (MQ=255) ttgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGct > 1:313081‑M1/49‑91 (MQ=255) ttgactcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAGGGGCATATGctt > 1:3065756‑M1/49‑91 (MQ=255) tgtctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAA‑GCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc > 1:1315718‑M1/48‑91 (MQ=255) acgtCAAAGGGGAAATTCCCGTTGAAGTATAAAAACAATGCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGctt < 2:21621/88‑1 (MQ=255) aCTTCAAAGGGAAGATTCCCGTTGAATTATAGATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctt > 2:1331737‑M2/1‑81 (MQ=255) cTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc < 1:566268/91‑1 (MQ=255) cTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc < 2:1389766/91‑1 (MQ=255) ttCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc‑t < 1:2209193/91‑1 (MQ=255) ttCAAAGGGAAAATTCCCGTTGAATTAGAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGgcatatgctttc > 2:695412‑M2/1‑79 (MQ=255) ttCAAAGGGAAAACTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc‑t < 1:3830950/91‑1 (MQ=255) tctcatatacttactacgtcttgctaatactcaatactcaattgaAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGcttc‑t > 1:480537‑M1/46‑91 (MQ=255) aaaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑tttt < 1:113339/91‑1 (MQ=255) aaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑ttttt > 1:1023112/1‑91 (MQ=255) aaGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑ttttt > 2:1147011/1‑91 (MQ=255) gAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAat > 2:1969688/1‑91 (MQ=255) aaaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAatt < 1:265555/91‑1 (MQ=255) aaaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattg < 1:41781/91‑1 (MQ=255) aaTTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattga > 1:1233076/1‑91 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtat > 2:161500/1‑91 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtat < 1:1751993/91‑1 (MQ=255) cccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtat > 1:1458966/1‑91 (MQ=255) ccGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtatt > 2:1024597/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtattg > 2:3044521/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtattg > 1:122560/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtattg > 1:64281/1‑91 (MQ=255) cGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATACAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtattg < 2:2396876/91‑1 (MQ=255) ttGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAattgagtattgag < 1:1384222/91‑1 (MQ=255) gAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAAttgagtattgagta < 2:327006/91‑1 (MQ=255) aaTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATtgagtattgagtat < 1:2835888/91‑1 (MQ=255) aaTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATtgagtattgagtat < 2:86773/91‑1 (MQ=255) aaTTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATtgagtattgagtat > 2:2743674/1‑91 (MQ=255) ttATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTCTTTTTTCAATTgagtattgagtatt > 1:1295385/1‑91 (MQ=255) ttATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTa > 2:3138875/1‑91 (MQ=255) tataAATACAATTCAGACTGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAg > 2:1824066/1‑91 (MQ=255) ataAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGc > 1:3311254/1‑91 (MQ=255) aTACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGa > 1:803397/1‑91 (MQ=255) cAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgt < 2:2610135/91‑1 (MQ=255) aaTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgta < 1:3901201/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag > 2:1527624/1‑91 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag < 1:2537146/91‑1 (MQ=255) aTTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgtag > 2:3001190/1‑91 (MQ=255) tCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACgtagta > 2:1657946/1‑91 (MQ=255) aGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaag < 1:1869063/91‑1 (MQ=255) gACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTagtaagt < 1:3484912/91‑1 (MQ=255) AAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATga > 1:3247913‑M1/1‑91 (MQ=255) AAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATga > 2:3952107‑M1/1‑91 (MQ=255) AAGAAATCATATGCAACTTCAAGAGTTAAGGGGCATATACTTC‑TTTTTCAATTTAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgag > 1:365044‑M1/1‑91 (MQ=255) AGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgaga < 1:1587385‑M1/91‑1 (MQ=255) AGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATgaga > 1:2704656‑M1/1‑91 (MQ=255) AAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACa < 1:2950714‑M1/91‑1 (MQ=255) AAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACaa < 1:876133‑M1/91‑1 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGgcatatgcttctttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtt < 2:2310751‑M2/91‑65 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGgcatatgcttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagtta < 1:2570627‑M2/91‑65 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc < 1:3817880/91‑1 (MQ=255) agCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAAc < 2:1249232/91‑1 (MQ=255) gCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 2:2707415/1‑91 (MQ=255) gCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACt > 1:2372995/1‑91 (MQ=255) cATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACtt < 1:2699870/91‑1 (MQ=255) atatGTAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTc < 1:2453824/91‑1 (MQ=255) atatGCAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaac < 1:3746518‑M2/91‑68 (MQ=255) atatGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTc < 1:2821292/91‑1 (MQ=255) atGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTa > 2:3079747/1‑91 (MQ=255) atGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTa < 2:2750842/91‑1 (MQ=255) gCAACTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacatac < 2:1037397‑M2/91‑72 (MQ=255) aaCTTCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataacg < 1:3616841‑M2/91‑74 (MQ=255) aCTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATg > 2:2624673/1‑91 (MQ=255) aCTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATg > 1:1070398/1‑91 (MQ=255) ttCAAGAGTGAAGGGgcatatgctttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataacggta < 1:2489358‑M2/91‑77 (MQ=255) ttCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGt > 2:2536599/1‑91 (MQ=255) cAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTg > 1:2899081/1‑91 (MQ=255) aaGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTga > 1:835121/1‑91 (MQ=255) aaGAGTGAAGGGGCATATGCTGC‑GTTTTCAATTGCGTGGTGAGTATTAGCAAGACGTAGTACGTATATGAGACAACTTCTACAATGGTTga < 2:1370517/91‑1 (MQ=255) agagTGAAGGGgcatatgcttcttttcggtctgaattgtatttataattcaacgggaattttccctttgaagttaacataacggtaggctg < 2:2244309‑M2/91‑81 (MQ=255) agagTGAAGGGGCATATGCTTC‑TTTGTCAAGAGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaa < 2:1058528/91‑1 (MQ=255) gagTGAAGGGGCATATGCTTC‑TTTTTCTTTTTTGTTTTTAGTATTTGCAAGACGTAGTAAGTATATGAGACAACTTCTTCACAGGTTgaag > 2:3961456/1‑91 (MQ=255) gagTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaag > 2:3796822/1‑91 (MQ=255) agTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagg > 2:582768/1‑91 (MQ=255) agTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagg < 1:3198543/91‑1 (MQ=255) agTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTAAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGATgaagg > 2:89955/1‑91 (MQ=255) gTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaagga > 2:2925300/1‑91 (MQ=255) tGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaa < 1:1114359/91‑1 (MQ=255) gAAGGGGCATATGCTTCTTTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaa > 1:3104446/1‑91 (MQ=255) gAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag < 1:2867993/91‑1 (MQ=255) gAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag < 1:1969688/91‑1 (MQ=255) gAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTgaaggaag < 2:1760785/91‑1 (MQ=255) ggggCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACg < 1:2326214/91‑1 (MQ=255) ggggCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACg < 1:357341/91‑1 (MQ=255) ggggCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACg > 2:626624/1‑91 (MQ=255) ggCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACGtt < 1:1193988/91‑1 (MQ=255) | CGTTATGTTAACTTCAAAGGGAAAATTCCCGTTGAATTATAAATACAATTCAGACCGAAAAGAAAGCATATGCAACTTCAAGAGTGAAGGGGCATATGCTTC‑TTTTTCAATTGAGTATTGAGTATTAGCAAGACGTAGTAAGTATATGAGACAACTTCTACAATGGTTGAAGGAAGACGTT > USA300TCH1516_ALE/263460‑263640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |