| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 326015 = | 192 (0.940) | 25 (0.140) | 13/142 | NT | 12.5% | intergenic (‑19/+49) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 326051 = | 181 (1.000) | intergenic (‑55/+13) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein | |||||
Only 100 of 338 total aligned reads displayed.
TAAATAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCC > USA300TCH1516_ALE/325925‑326105 | tAAATAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGA > 2:753260‑M1/1‑91 (MQ=255) tgaaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaAt < 1:2691957‑M1/2‑1 (MQ=255) tgaaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaacgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaAt < 2:668130‑M1/2‑1 (MQ=255) gaaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATa > 2:1263750‑M1/89‑91 (MQ=255) gaaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATa > 2:3821414‑M1/89‑91 (MQ=255) aaTAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATA < 2:3707211‑M1/91‑1 (MQ=255) aaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATaa < 1:1233960‑M1/4‑1 (MQ=255) aaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATaa < 1:1024264‑M1/4‑1 (MQ=255) aaaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaataaaaataaaaaaaggcatctaaataactaaaatataaaaATaa > 2:2746443‑M1/88‑91 (MQ=255) aTAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAA > 1:2484521‑M1/1‑91 (MQ=255) aTAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAA > 1:2434052‑M1/1‑91 (MQ=255) aaaacttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAg < 2:1061970‑M1/5‑1 (MQ=255) aGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGA < 2:1429370‑M1/91‑1 (MQ=255) aTAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATT > 1:3274624‑M1/1‑91 (MQ=255) tAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTG > 1:1339223‑M1/1‑91 (MQ=255) cttgaaaaagaaatcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTg < 2:3150365‑M1/9‑1 (MQ=255) aaTCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGa > 2:3733425/1‑91 (MQ=255) tCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGaaa > 1:783579/1‑91 (MQ=255) aaaTACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAgg < 1:3192852/91‑1 (MQ=255) aaaTACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAgg < 1:204914/91‑1 (MQ=255) aTACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAACATTGAAAGGCa > 1:3574729/1‑91 (MQ=255) aTACCACTTTTTCAATAAAAAAGAGAGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCa > 1:1935717/1‑91 (MQ=255) aCCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAg > 2:3560311/1‑91 (MQ=255) aCCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAg < 1:3342060/91‑1 (MQ=255) aCCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAg < 1:868699/91‑1 (MQ=255) ccACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGa < 2:1198372/91‑1 (MQ=255) atcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATg > 1:3010166‑M1/71‑91 (MQ=255) atcgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATg > 1:2761634‑M1/71‑91 (MQ=255) aCTTTTTTAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTTATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATg > 2:3309875/1‑91 (MQ=255) aCTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATg > 1:2744403/1‑91 (MQ=255) tttttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGAc > 1:2166964/1‑91 (MQ=255) cgaaaaaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGAc > 2:1831788‑M1/69‑91 (MQ=255) cgaaaaaaatggcggcaaaatggttgaatcaattgtaaaaaaggcagctaaataaaaaaaatataaaaATAAGATTGAAAGGCAAGATGAc > 2:2299786‑M1/69‑91 (MQ=255) ttttCAATAAAAGAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGAcc > 1:3049380/1‑91 (MQ=255) tttCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCt > 2:2915737/1‑91 (MQ=255) tCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgccttt < 2:2848439‑M1/91‑19 (MQ=255) cAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCc < 2:3654214‑M2/91‑2 (MQ=255) aaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaagtataaaaATAAGATTGAAAGGCAAGATGACCTTcc > 2:2611082‑M1/64‑91 (MQ=255) aaTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttca < 1:762964‑M1/91‑21 (MQ=255) tggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATc > 2:436861‑M1/60‑91 (MQ=255) aaaaaaGAGTGGTAGATGCGAAACAGATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatc > 2:3852565‑M2/1‑86 (MQ=255) aaaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatc < 1:887988‑M1/91‑24 (MQ=255) aaaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatc < 1:3099369‑M1/91‑24 (MQ=255) aaaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatc > 2:1676562‑M2/1‑86 (MQ=255) aaaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatc > 1:278804‑M2/1‑86 (MQ=255) aaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatct < 1:1799756‑M1/91‑25 (MQ=255) aaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTGTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatct < 1:1201891‑M1/91‑25 (MQ=255) aaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatcttt < 2:942910‑M2/91‑9 (MQ=255) ggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAt > 1:1788849‑M1/56‑91 (MQ=255) aaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatcttat < 1:1685159‑M2/91‑10 (MQ=255) gcaaactgtttgaatcaattttaaaaaaggcatctaaatgactaaaatataaagATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt > 1:3677067‑M1/55‑91 (MQ=255) agagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt < 2:1943467/91‑1 (MQ=255) gagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttt > 1:12971/1‑91 (MQ=255) agTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt < 2:1354031/91‑1 (MQ=255) agTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 1:911010/1‑91 (MQ=255) agTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 1:645659/1‑91 (MQ=255) aaaatgtttgaatcaattataaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 2:2655430‑M1/53‑91 (MQ=255) aaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttttt > 1:987117‑M1/52‑91 (MQ=255) tGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTta < 1:1456504/91‑1 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat < 1:1057620/91‑1 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat > 1:1635829/1‑91 (MQ=255) gTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtata > 2:2527748/1‑91 (MQ=255) aGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtt < 1:3727968/91‑1 (MQ=255) gATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAttt < 1:3929948/91‑1 (MQ=255) aTGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtttt > 1:3125956/1‑91 (MQ=255) tGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTa < 1:2571558/91‑1 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGgaaggtcatcttgcctttcaatcttatcattggaggagtggtt < 1:3632548‑M1/91‑44 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTa < 2:2368042/91‑1 (MQ=255) aaaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTa > 1:2574594/1‑91 (MQ=255) aaaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTa < 1:1600998/91‑1 (MQ=255) aaaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTa < 1:1115614/91‑1 (MQ=255) aaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAg < 1:355716/91‑1 (MQ=255) gTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATg < 2:3117491/91‑1 (MQ=255) gTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttt < 2:2144489/91‑1 (MQ=255) tttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 1:2335830/91‑1 (MQ=255) tttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 1:345138/91‑1 (MQ=255) cATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaa > 1:2008146/1‑91 (MQ=255) cATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaa > 2:1537854/1‑91 (MQ=255) aTTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaaa > 1:572219/1‑91 (MQ=255) aTTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaaa < 2:1756515/91‑1 (MQ=255) aTTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaaa < 2:1181546/91‑1 (MQ=255) ttAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAAt > 2:1984797/1‑91 (MQ=255) ttAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAAt > 1:706621/1‑91 (MQ=255) aaCCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATCTTTATATTGTAGTTATTTAGATGCCTTTTTTCAAATTg > 2:2187517/1‑91 (MQ=255) ccACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGAt < 2:3259891/91‑1 (MQ=255) ctcctcCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcat < 2:2417512‑M2/91‑54 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa > 1:1522639/1‑91 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa < 1:3513233/91‑1 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa < 1:1750939/91‑1 (MQ=255) tccAATGATAAGATTGAGAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa < 2:2938913/91‑1 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 1:3817443/1‑91 (MQ=255) ccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAt < 2:485297/91‑1 (MQ=255) ccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAt > 2:1758175/1‑91 (MQ=255) cAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAtt < 1:2122849/91‑1 (MQ=255) cAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAtt < 2:2258298/91‑1 (MQ=255) aaTGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAttt > 1:1722476/1‑91 (MQ=255) aTGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAtttt > 1:489013/1‑91 (MQ=255) tGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTTATTCAAACATTTTg > 2:2690237/1‑91 (MQ=255) gATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgc > 1:2681886/1‑91 (MQ=255) aTAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctt < 1:2370713‑M2/91‑65 (MQ=255) | TAAATAGATAATCAAATACCACTTTTTCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCC > USA300TCH1516_ALE/325925‑326105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |