| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 374491 = | 163 (0.800) | 12 (0.070) | 6/144 | NT | 7.2% | intergenic (+109/+133) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | 374527 = | 162 (0.880) | intergenic (+145/+97) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 273 total aligned reads displayed.
ATATGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTG > USA300TCH1516_ALE/374401‑374581 | ttattttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagatac < 1:3326589‑M1/1‑1 (MQ=255)atatGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGC > 2:1377973‑M1/1‑91 (MQ=255) gtgCTAGGTGAGTCGTGCGGTTAGCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGGAATAAAGCGC < 2:2874048‑M1/90‑1 (MQ=255) attttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGc > 2:3468096‑M1/89‑91 (MQ=255) ttttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGcc > 1:676399‑M1/88‑91 (MQ=255) ttttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGcc < 1:1949766‑M1/4‑1 (MQ=255) tGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCC > 2:3534337‑M1/1‑91 (MQ=255) tttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCt > 2:1614526‑M1/87‑91 (MQ=255) tttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCt > 1:201615‑M1/87‑91 (MQ=255) gCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCT > 2:363665‑M1/1‑91 (MQ=255) gCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCT < 1:3873114‑M1/91‑1 (MQ=255) ttaaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTg > 1:3007266‑M1/86‑91 (MQ=255) taaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGt > 2:51872‑M1/85‑91 (MQ=255) tATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGT < 1:1125582‑M1/91‑1 (MQ=255) aaaaactcaatttatcatcatgataaacagttattcgatcaaccatatccttcatacaatatattaagctcataaacagataCGcctgacc < 2:2723982‑M1/9‑4 (MQ=255) gTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGtctc < 1:2703549/91‑1 (MQ=255) aaaTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCAt > 2:2313390/1‑91 (MQ=255) tCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAg < 2:390415/91‑1 (MQ=255) tCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTCAAATAAAGCGCCTGTCTCATTAg > 2:683734/1‑91 (MQ=255) cGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGc > 1:2096528/1‑91 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa < 1:1877519/91‑1 (MQ=255) gCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaa < 2:2139234/91‑1 (MQ=255) atcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTaa > 1:3590999‑M1/67‑91 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaa < 1:2773805‑M1/91‑18 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaa > 2:2520474/1‑91 (MQ=255) tcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTaaa > 2:146567‑M1/66‑91 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaat < 1:1296825‑M1/91‑19 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa > 1:993479/1‑91 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAg < 2:3070279/91‑1 (MQ=255) atgctaaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAgg > 1:3557465‑M1/64‑91 (MQ=255) atgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAgg > 2:1790710‑M1/64‑91 (MQ=255) cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGg < 1:2396718‑M2/91‑2 (MQ=255) ggCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgaga < 1:1102372‑M1/91‑23 (MQ=255) ggCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGga > 1:2382692‑M2/1‑89 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:1715816‑M1/62‑91 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 2:1054630‑M1/62‑91 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgac < 1:1021697‑M2/91‑4 (MQ=255) aacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACAgg > 2:2270778‑M1/58‑91 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc < 1:744774‑M2/91‑8 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcg < 1:257308‑M1/91‑29 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 2:2068270‑M2/1‑83 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg < 1:2361212‑M2/91‑9 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 2:2387472‑M2/1‑83 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGt < 1:485366/91‑1 (MQ=255) ggATATAAGTAGCAGCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 2:1684997/90‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTTAAGAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACAAAAGGGACAGGCGTa < 1:3371773/91‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa > 2:267417/1‑91 (MQ=255) gATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 1:1772418/1‑91 (MQ=255) gATAGAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 1:3123421/1‑91 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATc < 1:1810841/91‑1 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATc < 1:1462758/91‑1 (MQ=255) tataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCt > 1:526412/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg < 1:3051488/91‑1 (MQ=255) ataAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 1:2358043/1‑91 (MQ=255) taAGTCGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAATCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGt < 2:1514540/91‑1 (MQ=255) taAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGt < 2:911090/91‑1 (MQ=255) aaGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGtt < 2:2939254/91‑1 (MQ=255) aGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 1:3759985/1‑91 (MQ=255) aGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 2:763571/1‑91 (MQ=255) aGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 1:2255849/1‑91 (MQ=255) aGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATg < 1:1509883/91‑1 (MQ=255) aGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATg > 2:3891727/1‑91 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc > 1:2441614/1‑91 (MQ=255) aTCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 1:2557054/91‑1 (MQ=255) gcagaGTGTTGAATTTGAAAATAGTAGGGTGAAATAAAGCGCCTGTCTGATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCt < 2:2622961/87‑1 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt < 2:3313694/91‑1 (MQ=255) cacaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt < 2:2046848/91‑1 (MQ=255) acaGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTta < 1:981241/91‑1 (MQ=255) caGTGTTGAATTTAAAAATAGTAAGGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:3666427/91‑1 (MQ=255) caGTGTTGAATTTAAAAATAGTAAAGTGAAGTAACGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:339278/91‑1 (MQ=255) aGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:3516896/91‑1 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 2:2465344/1‑91 (MQ=255) gtTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGAACAGGCGTATCTGTTTATGAGCTTAATaaa < 2:36925/91‑1 (MQ=255) ttGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:227567/91‑1 (MQ=255) gAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTg > 2:1788724/1‑91 (MQ=255) aaTTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2967981/1‑91 (MQ=255) aTTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTa > 2:1992739/1‑91 (MQ=255) ttAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATg < 1:2138131/91‑1 (MQ=255) aaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat > 1:924209/1‑91 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 2:854293/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 1:2655495/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat > 1:3193962/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 2:2366160/1‑91 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 2:2099875/1‑91 (MQ=255) gTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 2:322063/1‑91 (MQ=255) gTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 1:1379374/1‑91 (MQ=255) tAAAGTGAAATAAGGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg < 1:3957260/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:2704922/1‑91 (MQ=255) aGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTg < 1:1183524/91‑1 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa < 1:2201103/91‑1 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt > 1:3940439/1‑91 (MQ=255) aaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGa > 2:219486/1‑91 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa < 2:1744708/91‑1 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 2:1359074/91‑1 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 2:1900113/1‑91 (MQ=255) aGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatct < 1:1023428‑M2/91‑62 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga > 1:2992298‑M1/1‑8 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga > 2:1267953‑M1/1‑8 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgccacttatatctga > 2:436131‑M1/1‑8 (MQ=255) cgcCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga < 1:257344‑M2/91‑64 (MQ=255) | ATATGCTATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTTAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTG > USA300TCH1516_ALE/374401‑374581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |