| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 374498 | 170 (0.830) | 15 (0.080) | 9/144 | NT | 8.7% | intergenic (+116/+126) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 374518 | 162 (0.880) | intergenic (+136/+106) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 277 total aligned reads displayed.
ATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCA > USA300TCH1516_ALE/374408‑374588 | aaaaaactcaatttatcatcatgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGtc < 2:2828486‑M1/8‑1 (MQ=255) aaaTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCAt > 2:2313390/1‑91 (MQ=255) aTCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTa > 1:300685/1‑91 (MQ=255) tGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGa < 1:3759764/91‑1 (MQ=255) tGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaaaa < 2:1483300/91‑1 (MQ=255) tGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGaaaa > 2:3299022/1‑91 (MQ=255) gTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAAc > 2:3844380/1‑91 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaa < 1:2773805‑M1/91‑18 (MQ=255) aTCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaa > 2:2520474/1‑91 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaat < 1:1296825‑M1/91‑19 (MQ=255) tCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTaaa > 1:43856/1‑91 (MQ=255) cACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAg < 2:3070279/91‑1 (MQ=255) aCGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatga < 1:1499664‑M1/91‑21 (MQ=255) atgctaaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAgg > 1:3557465‑M1/64‑91 (MQ=255) atgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAgg > 2:1790676‑M1/64‑91 (MQ=255) ggCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCTTGTCTCATTAGCGAAAACTAAAggta > 2:1428705/1‑89 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg > 1:2402350‑M2/1‑85 (MQ=255) aacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACAgg > 2:2270778‑M1/58‑91 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcg < 1:257344‑M1/91‑29 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 2:2387472‑M2/1‑83 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 2:1267953‑M2/1‑83 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGt < 1:485366/91‑1 (MQ=255) ggcgataAGGAGCAGCACGGTGGTGAATGT‑AAAAATAGTAAAGTGGAGGAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 2:1685011/87‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgct < 1:1023428‑M1/91‑31 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 1:756154/91‑1 (MQ=255) gATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 1:1772418/1‑91 (MQ=255) gATATAAGTAGCATCACAGTATTGAATGT‑AAAAATAGTAAAGTAAAAAAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt < 2:338353/91‑1 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCcctttagttttcgctaatgagacaggcgcttt < 1:3767177‑M1/91‑33 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATc < 1:1810841/91‑1 (MQ=255) tataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCt > 1:526412/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 1:2358043/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 2:2698724/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg < 1:3051488/91‑1 (MQ=255) taAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGt < 2:911090/91‑1 (MQ=255) aGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 1:2255849/1‑91 (MQ=255) aGCATCACAGTGTTGAATTTAAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTAt < 2:2191183/91‑1 (MQ=255) aTCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 1:2557415/91‑1 (MQ=255) tCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCt < 2:1362003/91‑1 (MQ=255) cacaGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt < 2:2046848/91‑1 (MQ=255) acaGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTta < 2:2071129/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAGGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:3666427/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:339755/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:2630721/91‑1 (MQ=255) aGTGTTGAATTT‑AAAAATAGTAAAGTGAGATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:2384991/91‑1 (MQ=255) aGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:3516896/91‑1 (MQ=255) gtgtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 2:1769038/1‑91 (MQ=255) gtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 1:970380/1‑91 (MQ=255) gtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 2:2465344/1‑91 (MQ=255) gtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGAACAGGCGTATCTGTTTATGAGCTTAATaaa < 2:36925/91‑1 (MQ=255) ttGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:2696084/91‑1 (MQ=255) ttGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:227567/91‑1 (MQ=255) aaTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2154019/1‑91 (MQ=255) aaTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2967981/1‑91 (MQ=255) aTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTa > 2:1992739/1‑91 (MQ=255) aTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTa > 1:196589/1‑91 (MQ=255) t‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGCAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTCTATGa > 2:364285/1‑91 (MQ=255) gaaaaaTAGTAAAGTGAAAGAAAGCGCCTGTCTCATTAGCGAAGTCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGa < 1:3133436/90‑1 (MQ=255) aaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat > 1:924209/1‑91 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 1:2654085/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 2:854293/91‑1 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 2:492440/91‑1 (MQ=255) aGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAatat > 2:2366160/1‑91 (MQ=255) gTAAAGTGAAATAACGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 2:322052/1‑91 (MQ=255) gTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 1:1379374/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:2704939/1‑91 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt < 1:1928636/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 1:2514117/1‑91 (MQ=255) aGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTg < 1:1184721/91‑1 (MQ=255) aGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTg > 2:2113047/1‑91 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa < 1:2201103/91‑1 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa < 1:3920489/91‑1 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt < 2:2979387/91‑1 (MQ=255) aaaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCg < 2:685020/91‑1 (MQ=255) aaaTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCg > 2:103647/1‑91 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa < 2:1744708/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa < 1:686979/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa > 1:2372291/1‑91 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa > 2:1900113/1‑91 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt < 1:2103429/91‑1 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:1516246/1‑91 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:1144166/1‑91 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga > 1:2992298‑M1/1‑8 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga < 1:2361212‑M1/91‑84 (MQ=255) cgcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgccacttatatctga > 2:436131‑M1/1‑8 (MQ=255) CGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTg < 1:3261580‑M1/91‑1 (MQ=255) gcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttgctatttttaaattcaacactgtgatgctacttatatctgat < 1:3419080‑M1/91‑85 (MQ=255) gcCTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgat > 2:1112084‑M1/1‑7 (MQ=255) GCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGt > 1:3409926‑M1/1‑91 (MQ=255) ccTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatg < 2:1649384‑M1/91‑86 (MQ=255) ccTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatg > 2:2185809‑M1/1‑6 (MQ=255) ccTGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatg > 1:2402230‑M1/1‑6 (MQ=255) CCTGACTCATGAGCGAAATCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTgtg > 2:1514622‑M1/1‑90 (MQ=255) CTGTCTCATTAGCTAAAACTAAAGGGACAGGCGTATCTGTTTAGGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGttt > 1:3955218‑M1/1‑91 (MQ=255) CTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGttt < 2:1238050‑M1/91‑1 (MQ=255) tGTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtg < 1:2087778‑M1/91‑88 (MQ=255) gTCcctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgc < 1:1021697‑M1/91‑89 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt < 1:1095763‑M1/91‑1 (MQ=255) GTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTAt > 2:1834078‑M1/1‑91 (MQ=255) tctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgcc < 1:1102372‑M2/91‑70 (MQ=255) ccctttagttttcgctaatgagacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccg > 1:1722921‑M1/1‑1 (MQ=255) | ATGTAAATCGTGCTGTTATCACGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCA > USA300TCH1516_ALE/374408‑374588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |