| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 374498 | 170 (0.830) | 15 (0.080) | 9/144 | NT | 8.7% | intergenic (+116/+126) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 374518 | 162 (0.880) | intergenic (+136/+106) | lip2/USA300HOU_RS01705 | Lipase 2/hypothetical protein | |||||
Only 100 of 268 total aligned reads displayed.
CGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGTTTTT > USA300TCH1516_ALE/374429‑374608 | cGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGg < 1:2396718‑M2/91‑2 (MQ=255)atgataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAgg > 2:1790710‑M1/64‑91 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 2:1054472‑M1/62‑91 (MQ=255) gataaacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGa > 1:1715816‑M1/62‑91 (MQ=255) gCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgac < 1:1021697‑M2/91‑4 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca < 2:1731211‑M2/91‑5 (MQ=255) cacaTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgaca < 1:2087778‑M2/91‑5 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg > 1:2402350‑M2/1‑85 (MQ=255) caTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacagg < 2:2817326‑M2/91‑7 (MQ=255) aacagttattcgatcaaccatattattcatacaatttattaagctcataaacagataCGCCTGTCTCATTAGCGAAAACTAAAGGGACAgg > 2:2270778‑M1/58‑91 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc < 1:744774‑M2/91‑8 (MQ=255) aTCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGCAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggc < 1:3419080‑M2/91‑8 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 1:2992298‑M2/1‑83 (MQ=255) tCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcg > 2:2387472‑M2/1‑83 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGt < 1:485366/91‑1 (MQ=255) cAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGt > 2:1904831/1‑91 (MQ=255) ggATATAAGTAGCAGCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa < 2:1684997/90‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTT‑AAGAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACAAAAGGGACAGGCGTa < 1:3371773/91‑1 (MQ=255) aGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTa > 2:267417/1‑91 (MQ=255) gATAGAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAt > 1:3123421/1‑91 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATc > 2:2077111/1‑91 (MQ=255) atatAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATc < 1:1462758/91‑1 (MQ=255) tataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCt > 1:526412/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 2:2698724/1‑91 (MQ=255) ataAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTg > 1:2358043/1‑91 (MQ=255) aaGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGtt > 1:1730097/1‑91 (MQ=255) aGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 1:2255849/1‑91 (MQ=255) aGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGttt > 2:763571/1‑91 (MQ=255) gTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTa > 2:2358968/1‑91 (MQ=255) aGCATCACAGTGTTGAATTTAAAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTAt < 2:2191183/91‑1 (MQ=255) cATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAg > 1:667917/1‑91 (MQ=255) aTCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGc < 1:2557415/91‑1 (MQ=255) cacaGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCtt < 2:2046848/91‑1 (MQ=255) acaGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTta < 1:981241/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAGTAACGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:339278/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:2630721/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:339755/91‑1 (MQ=255) caGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCAAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaa < 2:3684291/91‑1 (MQ=255) aGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat > 2:1127618/1‑91 (MQ=255) aGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaat < 1:3516896/91‑1 (MQ=255) gtgtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTtaata > 2:1769038/1‑91 (MQ=255) gtTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATaaa > 2:2465344/1‑91 (MQ=255) ttGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:2696084/91‑1 (MQ=255) ttGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAAt < 1:227567/91‑1 (MQ=255) aaTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2967981/1‑91 (MQ=255) aaTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGt > 1:2154019/1‑91 (MQ=255) aTTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTa > 1:196589/1‑91 (MQ=255) aaaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaa < 2:1826489/91‑1 (MQ=255) aaaaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaat > 1:924209/1‑91 (MQ=255) aaTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataa > 2:3660821/1‑91 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 2:1970467/91‑1 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat > 1:3193962/1‑91 (MQ=255) aTAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGaataat < 1:2654085/91‑1 (MQ=255) tAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAataata < 2:1384672/91‑1 (MQ=255) gTAAAGTGAAATAACGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATg > 2:322052/1‑91 (MQ=255) tAAAGTGAAATAAGGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATgg < 1:3957260/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt < 1:1928636/91‑1 (MQ=255) aaaGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGt > 2:2704939/1‑91 (MQ=255) aGTGCATTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTAACCGTGTCGGTGCTTAATAAATCGTATGAGAAATATGGCTg > 2:2113048/1‑91 (MQ=255) aGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTg < 1:1184721/91‑1 (MQ=255) gTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGa < 1:2201103/91‑1 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt > 1:3940439/1‑91 (MQ=255) tGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGAt < 2:2979387/91‑1 (MQ=255) gAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATc < 1:1377973/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa < 2:558675/91‑1 (MQ=255) aTAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGaa > 1:2372291/1‑91 (MQ=255) tAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAAt < 1:1798602/91‑1 (MQ=255) aaaGCGCCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatat < 1:3767177‑M2/91‑60 (MQ=255) aaaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATa < 2:881944/91‑1 (MQ=255) aaGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATaa < 2:1359074/91‑1 (MQ=255) gcgcCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACt > 1:1516246/1‑91 (MQ=255) cgcCTGTCTCATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctga < 1:257344‑M2/91‑64 (MQ=255) GCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGt < 1:3045547‑M1/91‑1 (MQ=255) TGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTa > 2:1523517‑M1/1‑91 (MQ=255) tctcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgcc < 1:1102372‑M2/91‑70 (MQ=255) TCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATc < 2:378437‑M1/91‑1 (MQ=255) tcATTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgt < 1:1499664‑M2/91‑72 (MQ=255) cATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatg < 2:3901421/91‑1 (MQ=255) aTTGGCGAAGACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatca < 1:3555518/91‑3 (MQ=255) aTTAGCGAAAACTAGAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatga < 2:2622554/91‑1 (MQ=255) aTTAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtga < 1:1296825‑M2/91‑74 (MQ=255) aTTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatga < 1:1134061/91‑1 (MQ=255) ttAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtgat < 1:363665‑M2/91‑75 (MQ=255) ttAGCGAAAACTAAAGGgacaggcgctttatttcactttactatttttaaattcaacactgtgatgctacttatatctgatgtgccgtgat < 1:2773805‑M2/91‑75 (MQ=255) tAGCGAAAACTAACGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgatg > 2:1304170/1‑91 (MQ=255) tAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCatgatg > 1:2524585/1‑91 (MQ=255) aGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCAtgatga < 1:1034363/91‑1 (MQ=255) cGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATa < 1:1422202/91‑1 (MQ=255) cGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATa > 2:458883/1‑91 (MQ=255) aaaCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAAt < 1:1063646/91‑1 (MQ=255) aCTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTg > 1:3540921/1‑91 (MQ=255) cTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGa < 1:1143219/91‑1 (MQ=255) tAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAg > 2:1273144/1‑91 (MQ=255) aaaGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGt > 1:1259531/1‑91 (MQ=255) gggACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGtttt < 1:1362918/91‑1 (MQ=255) gggACAGGCGTATCTGTTCATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGCTAAATTGAGcttt > 2:1867144/1‑91 (MQ=255) ggACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGttttt > 2:3345183/1‑91 (MQ=255) ggACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGttttt < 1:2329377/91‑1 (MQ=255) ggACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGttttt < 1:3313533/91‑1 (MQ=255) ggACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGttttt < 2:1460849/91‑1 (MQ=255) | CGGCACATCAGATATAAGTAGCATCACAGTGTTGAATTT‑AAAAATAGTAAAGTGAAATAAAGCGCCTGTCTCATTAGCGAAAACTAAAGGGACAGGCGTATCTGTTTATGAGCTTAATAAATTGTATGAATAATATGGTTGATCGAATAACTGTTTATCATGATGATAAATTGAGTTTTT > USA300TCH1516_ALE/374429‑374608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |