| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 393597 | 127 (0.620) | 11 (0.060) | 7/142 | NT | 8.6% | intergenic (+20/+40) | USA300HOU_RS01800/USA300HOU_RS01805 | NAD(P)H‑dependent FAD/FMN reductase/hypothetical protein |
| ? | USA300TCH1516_ALE | = 393621 | 121 (0.670) | intergenic (+44/+16) | USA300HOU_RS01800/USA300HOU_RS01805 | NAD(P)H‑dependent FAD/FMN reductase/hypothetical protein | |||||
Only 100 of 256 total aligned reads displayed.
AATCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGCATAT > USA300TCH1516_ALE/393507‑393687 | gcttatgacaatcattattacctcaatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTc < 1:371910‑M1/9‑1 (MQ=255) ccACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGc < 1:2090946/91‑1 (MQ=255) cacaATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGca < 1:3259697/91‑1 (MQ=255) acaATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcac > 1:2818294/1‑91 (MQ=255) acaATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcac < 2:3865669/91‑1 (MQ=255) acaATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcac > 1:233093/1‑91 (MQ=255) caATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcaca < 1:2904034/91‑1 (MQ=255) aTGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACt < 1:1639717/91‑1 (MQ=255) aTGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACt > 1:2235688/1‑91 (MQ=255) cGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTaaa > 2:2446063/1‑91 (MQ=255) tGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGt > 2:2813890/1‑91 (MQ=255) cAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTCTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAg > 1:3948456/1‑91 (MQ=255) ctcaatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAgtg > 2:1936973‑M1/62‑91 (MQ=255) aGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAgtgt < 1:1507479/91‑1 (MQ=255) tACAACAACAAGTGTTTGAAGAAGAAAACAACTAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTGAATTTGTAAGTGttt < 1:3374598/91‑1 (MQ=255) tACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGttt > 1:934943/1‑91 (MQ=255) acaacaacaAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccg < 1:2476192‑M1/91‑26 (MQ=255) acaacaacaAGTGTTTGAAGAAGAAAACAACCAATACAACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTg > 1:1931826‑M2/1‑90 (MQ=255) caacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccga < 1:1853987‑M1/91‑27 (MQ=255) caacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccga < 1:1853942‑M1/91‑27 (MQ=255) caacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTga < 1:1478048‑M2/91‑3 (MQ=255) aacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgag < 1:3262493‑M2/91‑4 (MQ=255) tgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGc > 1:2289484‑M1/55‑91 (MQ=255) tgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGc > 2:305668‑M1/55‑91 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc > 2:2885962‑M2/1‑87 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc < 2:3220597‑M2/91‑5 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc < 2:3930300‑M2/91‑5 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg < 1:204369‑M2/91‑6 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg < 2:2402887‑M2/91‑6 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg > 2:530000‑M2/1‑86 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg > 2:1880704‑M2/1‑86 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg < 2:3452212‑M2/91‑6 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg > 1:3496018‑M2/1‑86 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTAAAAAAATAAGACGCTCaaacacttacaaatttagtgtgccgagcg < 2:2569997‑M1/91‑30 (MQ=255) aacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgt > 1:3182887‑M2/1‑85 (MQ=255) caaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtct > 2:3750595‑M2/1‑83 (MQ=255) aaGTGTTTGTAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtctt > 1:3787607‑M2/1‑82 (MQ=255) aaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtctt > 1:3786729‑M2/1‑82 (MQ=255) aGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCttt < 1:2997066/91‑1 (MQ=255) aGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCttt > 2:2047024/1‑91 (MQ=255) gtgtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCtttt < 1:2581006/91‑1 (MQ=255) gtgtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCtttt < 1:1000033/91‑1 (MQ=255) gtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCa < 1:838153/91‑1 (MQ=255) gtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCa > 1:175833/1‑91 (MQ=255) tttGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCat > 2:363736/1‑91 (MQ=255) tGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTAGTAAGTGTTTGAGCGGCTTTTCatat > 1:1223585/1‑91 (MQ=255) gaagaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATAtt < 2:384183/91‑1 (MQ=255) aagaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTa > 2:692435/1‑91 (MQ=255) agaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTaa < 2:1866636/91‑1 (MQ=255) gaagaaAACAACCAATACGACTTGTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTCGTAAGTGTTTGAGCGTCTTTTCacatcacc > 2:1497660/1‑87 (MQ=255) aagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACt < 2:34232/91‑1 (MQ=255) gaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtat > 1:2035907/1‑91 (MQ=255) aaaaCAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtata < 2:3071780/91‑1 (MQ=255) aaaCAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatat < 1:2986045/91‑1 (MQ=255) acaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAg > 2:2591805/1‑91 (MQ=255) caacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGc < 2:2390890/91‑1 (MQ=255) caacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGc > 1:2866549/1‑91 (MQ=255) acCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCa > 1:3623599/1‑91 (MQ=255) acCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATAAACTATATAGCCa < 2:1330893/91‑1 (MQ=255) acCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGAGTTTGAGCGTCTTTTCATATTAACTATATAGCCa > 2:3658057/1‑91 (MQ=255) aaTACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATg < 2:812588/91‑1 (MQ=255) cGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacg < 2:1708234/91‑1 (MQ=255) cGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacg < 2:358603/91‑1 (MQ=255) gACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacga < 1:3557957/91‑1 (MQ=255) aCTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacgac < 2:2955688/91‑1 (MQ=255) cTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacgacg > 2:1012705/1‑91 (MQ=255) ttAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTAATATTAACTATATAGCCAATGAACGACGATa > 1:722296/1‑91 (MQ=255) aaGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAg > 1:1039005/1‑91 (MQ=255) aGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAgg > 1:3348688/1‑91 (MQ=255) aGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAgg < 2:466896/91‑1 (MQ=255) aGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAgg > 1:429940/1‑91 (MQ=255) tataAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCa < 2:163791/91‑1 (MQ=255) tataAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCa > 1:542141/1‑91 (MQ=255) tataAAAAGAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCa < 2:3260298/91‑1 (MQ=255) ataAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCaa > 1:136678/1‑91 (MQ=255) ataAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCaa > 2:1104018/1‑91 (MQ=255) aaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtga < 1:2759458/91‑1 (MQ=255) aaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtga < 1:2624387/91‑1 (MQ=255) aaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtga > 1:1859614/1‑91 (MQ=255) aTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtgatg > 2:252442/1‑91 (MQ=255) aTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtgatg > 1:3458752/1‑91 (MQ=255) aTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtgatg < 1:1908958/91‑1 (MQ=255) tAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtgatga < 2:3791729/91‑1 (MQ=255) aaGACGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacactt < 2:2286139‑M1/91‑83 (MQ=255) AGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATACTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACa < 2:1372799‑M1/91‑1 (MQ=255) aCGCTCatacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcatacacttgtt < 1:1977287‑M1/91‑86 (MQ=255) aCGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgtt < 1:634499‑M2/91‑62 (MQ=255) ACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAg > 2:3343674‑M1/1‑91 (MQ=255) cGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttg > 1:285263‑M1/1‑5 (MQ=255) cGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttg < 1:1723036‑M1/91‑87 (MQ=255) CGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGc < 1:3622802‑M1/91‑1 (MQ=255) GCTCGGCTCACTAATTTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGAGATGACATGCa < 2:177528‑M1/91‑1 (MQ=255) cTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgtt < 2:2562692‑M1/91‑89 (MQ=255) tCaaacccttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg < 1:3292897‑M1/91‑90 (MQ=255) tCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg < 1:577153‑M1/91‑90 (MQ=255) tCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg > 2:911897‑M1/1‑2 (MQ=255) tCGGCACACTAAATTTGTAAGTGTTTgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg < 2:3696795‑M2/91‑66 (MQ=255) TCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGCata < 2:2692915‑M1/91‑1 (MQ=255) caaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttgt > 2:1291365‑M1/1‑1 (MQ=255) caaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttgt > 2:1495488‑M1/1‑1 (MQ=255) | AATCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGCATAT > USA300TCH1516_ALE/393507‑393687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |