| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 650749 | 185 (0.910) | 18 (0.090) | 9/154 | NT | 9.3% | intergenic (+1/+51) | USA300HOU_RS03100/rclA | hypothetical protein/putative pyridine nucleotide‑disulfide oxidoreductase RclA |
| ? | USA300TCH1516_ALE | = 650786 | 173 (0.880) | intergenic (+38/+14) | USA300HOU_RS03100/rclA | hypothetical protein/putative pyridine nucleotide‑disulfide oxidoreductase RclA | |||||
Only 100 of 240 total aligned reads displayed.
AGAAAACGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTA > USA300TCH1516_ALE/650659‑650839 | aGAAAACGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAA < 1:2677719‑M1/91‑1 (MQ=255) gAAAACGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAg > 2:2552666/1‑91 (MQ=255) gAAAACGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAg < 1:3595212/91‑1 (MQ=255) aaaCGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGcc > 2:3577075/1‑91 (MQ=255) aaCGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCt > 1:2033464/1‑91 (MQ=255) aaCGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCt > 1:146349/1‑91 (MQ=255) aCGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTg > 1:535420/1‑91 (MQ=255) aCGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTg > 1:1348377/1‑91 (MQ=255) gACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGAt < 1:1773717/91‑1 (MQ=255) aCATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATg > 2:2935563/1‑91 (MQ=255) aTGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGgc < 2:3051663/91‑1 (MQ=255) tGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGgca > 2:3835631/1‑91 (MQ=255) gaagaaCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGgcag > 2:3660579/1‑91 (MQ=255) aagaaCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGgcagc > 1:690652/1‑91 (MQ=255) gaaCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATACAGCCTGATGGCCGcat > 2:1507379/1‑91 (MQ=255) gaaCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGcat > 2:759224/1‑91 (MQ=255) gaaCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGcat > 2:1509999/1‑91 (MQ=255) aCGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGcatca < 1:891317/91‑1 (MQ=255) cGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAGGGCACAACAATAAAGCCTGATGGCAGcatcat < 2:610034/91‑1 (MQ=255) cGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGcatcat < 2:3871436/91‑1 (MQ=255) aaaCGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCa > 1:3178428/1‑91 (MQ=255) aaCGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCaa > 1:15874/1‑91 (MQ=255) cgtcgtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATg > 1:334952/1‑91 (MQ=255) cgtcgtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATg > 2:2016695/1‑91 (MQ=255) tcgtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAgcctggtggcacgcattgaatgatgc < 1:3393124‑M1/91‑27 (MQ=255) tcgtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCg > 2:2081060/1‑91 (MQ=255) gtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTg > 1:1417669/1‑91 (MQ=255) gtAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTAATGGCAGCATCATTCAATGCGTg < 1:2966755/91‑1 (MQ=255) aaaGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGcc < 1:95497/91‑1 (MQ=255) aaaGTAGAACAAGATAGAAAGCTGAAAGAAAGATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGcc < 1:2477762/91‑1 (MQ=255) aGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAacctggtggcacgcattgaatgatgctgccat < 1:2363410‑M1/91‑33 (MQ=255) aGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGccac < 2:1373552/91‑1 (MQ=255) aGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGccac < 1:1955399/91‑1 (MQ=255) aGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGccac < 1:1225255/91‑1 (MQ=255) gTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAGAGCACAACAATAAAgcctggtggcacgcattgaatgatgctgccatc < 1:1870588‑M1/91‑34 (MQ=255) gTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAgcctggtggcacgcattgaatgatgctgccatc < 2:71398‑M1/91‑34 (MQ=255) gTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGccacc > 1:3706935/1‑91 (MQ=255) tAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGccacca < 2:1992460/91‑1 (MQ=255) aGAACAAGATAGAAAGCTTAAAGAAAAATTAGAGAAGCGAAAAGCACAACAATAAAacctggtggcacgcattgaatgatgctgccatcag < 1:3245793‑M1/91‑36 (MQ=255) aGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAg > 2:3236382/1‑91 (MQ=255) gAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAgg < 1:1012796/91‑1 (MQ=255) aaCAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGt < 2:3018238/91‑1 (MQ=255) aCAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTt < 2:169040‑M2/91‑2 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAacctggtggcacgcattgaatgatgctgccatcaggctt < 1:3522128‑M1/91‑40 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAacctggtggcacgcattgaatgatgctgccatcaggctt < 1:47534‑M1/91‑40 (MQ=255) cAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAacctggtggcacgcattgaatgatgctgccatcaggctt < 1:47571‑M1/91‑40 (MQ=255) aaGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTttt > 1:1742290‑M2/1‑88 (MQ=255) aGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAATCACAACAATAAAGACTGATGGCAGCATCATTCAATGCGTGCCACCAGAttttt > 1:3670998/1‑91 (MQ=255) aGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGttttt < 2:2824438/91‑1 (MQ=255) gATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACATAAAAacctggtggcacgcattgaatgatgctgccatcaggctttat < 1:2639436‑M1/91‑43 (MQ=255) gATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACATAAAAacctggtggcacgcattgaatgatgctgccatcaggctttat < 1:2639238‑M1/91‑43 (MQ=255) tAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAGTGCGTGCCACCAGGTTCTTATg > 2:3194849/1‑91 (MQ=255) tAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg < 2:3346732/91‑1 (MQ=255) tAGAAAGCGTAAAGGAAAAGTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATg < 2:2645952/91‑1 (MQ=255) aGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGt > 2:1436577/1‑91 (MQ=255) gAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtt > 2:3163885/1‑91 (MQ=255) gAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtt > 2:270621/1‑91 (MQ=255) gAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtt < 1:568433/91‑1 (MQ=255) caaaGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtt > 1:3010325/2‑91 (MQ=255) aaGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGtttt > 1:2333532/1‑91 (MQ=255) gCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGt < 1:3446791/91‑1 (MQ=255) cTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTc < 1:502966/91‑1 (MQ=255) cTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTc < 2:949339/91‑1 (MQ=255) cTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTc > 2:2261795/1‑91 (MQ=255) aaGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGa > 1:1525942/1‑91 (MQ=255) gAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGaaa < 1:2469321/91‑1 (MQ=255) aaaaaTTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAAt < 1:1159785/91‑1 (MQ=255) aGAAAAGCGAAAAGCACAACAATAACGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa < 2:490155/91‑1 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa > 1:2212198/1‑91 (MQ=255) aGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataa < 1:3738426/91‑1 (MQ=255) gaaaagcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATtaaataaa > 2:458812/1‑91 (MQ=255) aagcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCa > 2:2960638/1‑91 (MQ=255) agcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAGATAAATCAt > 1:3779643/1‑91 (MQ=255) agcgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCAt > 1:2842933/1‑91 (MQ=255) agcgaaaagcACAACAAGAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCAt < 2:1298649/91‑1 (MQ=255) cgaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTa > 1:2064061/1‑91 (MQ=255) gaaaagcACAACAGTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTaa < 2:2491118/91‑1 (MQ=255) gaaaagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTaa < 2:2365860/91‑1 (MQ=255) aagcACAACAATGAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATg < 1:716603/91‑1 (MQ=255) aagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTaaacg > 2:2933225/1‑89 (MQ=255) aagcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATg > 1:620799/1‑91 (MQ=255) gcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGAt > 1:1170216/1‑91 (MQ=255) gcACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGAt > 1:1335514/1‑91 (MQ=255) acaacaATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTc > 1:2805871/1‑91 (MQ=255) acaacaATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTc > 2:2759503/1‑91 (MQ=255) caacaaTAAAGCCTGATGGTAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCg > 1:3844440/1‑91 (MQ=255) caacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCg < 1:1472678/91‑1 (MQ=255) aacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCgg > 2:3383783/1‑91 (MQ=255) aacaaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCgg > 1:2156399/1‑91 (MQ=255) caaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGcc > 2:1756802/1‑91 (MQ=255) aaTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCa < 2:2701429/91‑1 (MQ=255) aTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTttttatgttgtgcttttcgcttttctaatttttctttaagctttctatc < 1:1257941‑M2/91‑50 (MQ=255) aTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCAt < 2:2223339/91‑1 (MQ=255) aTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCAt < 2:846249/91‑1 (MQ=255) aTAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCAt > 1:1565763/1‑91 (MQ=255) aaaacctggtggcacgcattgaatgatgctgccatcaggctttattgttgtgcttttcgcttttctaatttttctttaagctttctatctt > 2:381203‑M1/1‑3 (MQ=255) aaaacctggtggcacgcattgaatgatgctgccatcaggcttcatcgttgtgcttttcgcttttctcctttttctttaagctttctatctt > 2:2803723‑M1/1‑3 (MQ=255) aaaGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCg > 1:2698939/1‑91 (MQ=255) aaacctggtggcacgcattgaatgatgctgccatcaggctttattgttgtgcatttcgcttttctaatttttctttaagctttctatcttg > 2:1730652‑M1/1‑2 (MQ=255) aaGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGt < 2:2192597/91‑1 (MQ=255) | AGAAAACGACATGAAGAACGTAAACGTCGTAAAGTAGAACAAGATAGAAAGCTTAAAGAAAAATTAGAAAAGCGAAAAGCACAACAATAAAGCCTGATGGCAGCATCATTCAATGCGTGCCACCAGGTTTTTATGTTTTGTCTAGAAATTAAATAAATCATTAAATGATTCGGCCATCGTA > USA300TCH1516_ALE/650659‑650839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |