| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 671622 = | 115 (0.560) | 26 (0.140) | 8/146 | NT | 17.8% | intergenic (+247/‑141) | argS/nth_1 | Arginine‑‑tRNA ligase/Endonuclease III |
| ? | USA300TCH1516_ALE | = 2866877 | 136 (0.730) | intergenic (‑276/+177) | USA300HOU_RS14695/noc_2 | hypothetical protein/Nucleoid occlusion protein | |||||
Only 100 of 170 total aligned reads displayed.
CATAAATCAATGTTCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGAAATAAAT > USA300TCH1516_ALE/671534‑671712 | atgatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg > 2:2295812‑M1/90‑91 (MQ=255) gatattttcgcaaactttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcactttcgttcAGTc < 2:2193925‑M1/4‑1 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcatggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc < 2:3245188‑M1/4‑1 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc < 2:1446523‑M1/4‑1 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc < 2:2455457‑M1/4‑1 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:396593‑M1/88‑91 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaaatgaaaaaagcttgttacaagcgcattttcgttcAGTc > 2:2666747‑M1/88‑91 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactaaaaaaaaaaaaagcttgttacaagcgcattttcgttcAGTc > 2:1092099‑M1/88‑91 (MQ=255) gatattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgaatagaaaagaaaaaagcttgttacaagcgcattttcgttcAGTc > 2:2952717‑M1/88‑91 (MQ=255) atattttcgcaaaatttatttcgtcgtcccaccccagcaaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCa < 2:1007599‑M1/5‑1 (MQ=255) tCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCcggc > 2:1831499/1‑91 (MQ=31) cTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCcggcg < 1:2900857/91‑1 (MQ=32) cTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCcggcg > 2:1346214/1‑91 (MQ=32) cTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCcggcg < 2:2285046/91‑1 (MQ=32) aTGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCggg < 2:3810013/91‑1 (MQ=34) gCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTTCAATTCTAGTCAACCT‑TGCCGGCgggg > 1:576377/1‑91 (MQ=255) gCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGc < 1:1733681/91‑1 (MQ=37) gCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGc < 1:2610988/91‑1 (MQ=37) ctctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGcc < 1:3694345/91‑1 (MQ=38) tctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGccc > 1:2396865/1‑91 (MQ=39) tctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGccc > 1:2396824/1‑91 (MQ=39) tACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCca < 1:2070831/91‑1 (MQ=39) tACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCca < 1:1869056/91‑1 (MQ=39) aCAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCcaa < 1:2467831/91‑1 (MQ=39) aaGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCcaacaa < 1:1131176/91‑1 (MQ=38) aGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACaaa > 1:280345/1‑91 (MQ=39) gTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTTGTCAACCT‑CGCCGGCGGGGCCCCAACaaat > 2:1908115/1‑90 (MQ=255) gTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAag > 1:2303675/1‑91 (MQ=39) ttATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAaga < 1:3020543/91‑1 (MQ=37) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTTTATTCTATTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga > 2:1235800/1‑91 (MQ=255) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGTCCCAACAAAgaga > 2:1030444/1‑91 (MQ=255) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga < 1:2329699/91‑1 (MQ=38) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga > 2:1227199/1‑91 (MQ=39) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga > 2:3704524/1‑91 (MQ=39) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga < 2:289484/91‑1 (MQ=37) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga < 2:3547456/91‑1 (MQ=38) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga < 2:3547391/91‑1 (MQ=39) ataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGA‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAgaga < 1:3943820/91‑1 (MQ=255) taATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaa > 1:2267874/1‑91 (MQ=38) taATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaa > 1:2109157/1‑91 (MQ=37) aaTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaaa < 1:2170519/91‑1 (MQ=35) aaTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaaa > 2:3552307/1‑91 (MQ=37) aaTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaaa < 2:2363743/91‑1 (MQ=37) aTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAt > 1:899351/1‑91 (MQ=35) tGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAtt < 1:407667/91‑1 (MQ=34) ggCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTg > 1:2188691/1‑91 (MQ=34) gCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTgg < 1:1027789/91‑1 (MQ=33) cAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGa < 1:1405310/91‑1 (MQ=33) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt > 1:3708623/1‑91 (MQ=34) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:1909168/91‑1 (MQ=33) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt > 1:3364191/1‑91 (MQ=34) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:705628/91‑1 (MQ=34) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:1372857/91‑1 (MQ=34) gtagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAtt < 1:1333138/91‑1 (MQ=34) tagtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTgggaat < 2:3884635/91‑5 (MQ=21) aaggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACTACTGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:1649343‑M1/43‑1 (MQ=255) agtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc < 1:664062/91‑1 (MQ=34) agtTGACAGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc < 1:1971813/91‑1 (MQ=21) gtTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTccc < 2:2162195/91‑1 (MQ=33) ttGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGTGGGGTCCCAACAAAGAGAAATTGGATTCCCa < 2:3014906/91‑1 (MQ=255) tgactagaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCaa < 1:549875‑M1/48‑1 (MQ=255) gACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCTATTTTTTTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAt > 2:3962464/1‑91 (MQ=11) gACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAt > 1:2243533/1‑91 (MQ=34) gACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAt > 1:2242109/1‑91 (MQ=34) gACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAt > 2:1526079/1‑91 (MQ=34) aCTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt > 1:2916304/1‑91 (MQ=34) aCTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:1257340/91‑1 (MQ=34) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACGAAGAGAAATTGGATTCCCAAtt < 2:807699‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 2:855812‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:1923910‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:1923897‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:1925101‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 2:3742832‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcatattcattcAGTCACCCT‑TGCCGGCGGAGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:3152506‑M1/50‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAtt < 1:1267260‑M1/50‑1 (MQ=255) tGAACGAAAATTCGCTTGTAGCAAGC‑TTTTTTCAGTTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTc < 2:766713/91‑1 (MQ=16) tGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTc < 1:2440585/91‑1 (MQ=34) agaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCt < 1:3234700‑M1/53‑1 (MQ=255) aaCGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTa > 1:3936423/1‑91 (MQ=34) gaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTa < 2:2340602‑M1/54‑1 (MQ=255) aCGAAAATTCGCTTGTAACAAGC‑TTTTTTTAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTAc > 2:2290360/1‑91 (MQ=21) aCGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTAc > 1:188272/1‑91 (MQ=34) aCGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTAc > 2:2290334/1‑91 (MQ=34) aCGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTAc < 2:477272/91‑1 (MQ=33) cGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACa > 1:1077524/1‑91 (MQ=34) aattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACACAGAGTAATTGGATTCCCAATTTCTAc < 2:419596‑M1/55‑1 (MQ=255) gAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAg < 2:1542644/91‑1 (MQ=34) gAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAg < 1:2041071/91‑1 (MQ=34) aaaaagcttgttacaagcgcattttcaattctAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGAc < 1:1761098‑M1/59‑1 (MQ=255) aTTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACaa < 2:1834008/91‑1 (MQ=33) ttCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAAt > 1:827668/1‑91 (MQ=32) tCGCTTGTAACAAGC‑GTTTTTCAATGATAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATg < 2:3422815/91‑1 (MQ=255) agcttgttacaagcgcattttcaattctAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATg < 1:1740472‑M1/63‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGATATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 2:3339890‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat > 1:552242‑M1/1‑91 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat > 1:386703‑M1/1‑91 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 1:3231971‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 1:1435077‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat > 2:882419‑M1/1‑91 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCGACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat > 2:3193607‑M1/1‑91 (MQ=255) | CATAAATCAATGTTCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGC‑TTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGAAATAAAT > USA300TCH1516_ALE/671534‑671712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |