| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 672540 = | 204 (1.000) | 19 (0.100) | 12/150 | NT | 8.9% | intergenic (+142/‑237) | nth_1/btuF | Endonuclease III/Vitamin B12‑binding protein |
| ? | USA300TCH1516_ALE | 672565 = | 198 (1.040) | intergenic (+167/‑212) | nth_1/btuF | Endonuclease III/Vitamin B12‑binding protein | |||||
Only 100 of 263 total aligned reads displayed.
CTATTTTCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAAGAGG > USA300TCH1516_ALE/672450‑672630 | tgtgcgttagcatccaactgcgttcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactc > 2:2631583‑M1/91‑91 (MQ=255)tgtgcctcagcatccaactgcgttcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactc > 1:1958373‑M1/91‑91 (MQ=255) tATTTTCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGcc > 2:1717200/1‑91 (MQ=255) tgccttagcatccaactgcgttcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactccc < 2:1365397‑M1/3‑1 (MQ=255) ttttCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGcccc < 1:284881/91‑1 (MQ=255) ttttCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGcccc < 1:1753451/91‑1 (MQ=255) ttttCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGcccc < 1:3284336/91‑1 (MQ=255) ttCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGCGCAGCAACTGCATAAGAGCCCCTa < 1:2717140/91‑1 (MQ=255) tCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTaa < 1:750009/91‑1 (MQ=255) cTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAAt < 2:3899370/91‑1 (MQ=255) tAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCt < 2:2408894/91‑1 (MQ=255) aGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATATGAGCCCCTAATCGCTa > 2:1472307/1‑91 (MQ=255) aGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTa > 1:20279/1‑91 (MQ=255) tATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTaaa < 2:2546060/91‑1 (MQ=255) aTGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAg > 1:867204/1‑91 (MQ=255) tgtgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGc < 1:531679/91‑1 (MQ=255) gtgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCt < 1:3167182/91‑1 (MQ=255) gtgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCt < 1:1142063/91‑1 (MQ=255) gtgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCt > 2:1999201/1‑91 (MQ=255) gtgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCt > 2:3091659/1‑91 (MQ=255) ctgcgttcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactCCCCTAATCGCTAAAGCt > 2:505548‑M1/74‑91 (MQ=255) tgcgtgcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactCCCCTATTCGCTAAAGCTc > 2:3160196‑M1/73‑91 (MQ=255) tgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAGAGCTc > 2:3207517/1‑91 (MQ=255) tgGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTc > 1:3770029/1‑91 (MQ=255) ggACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCa > 2:3079996/1‑91 (MQ=255) cTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAgg < 1:3696469/91‑1 (MQ=255) cTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAgg < 1:3023107/91‑1 (MQ=255) ttATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAggg < 1:1594973/91‑1 (MQ=255) tcctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactCCCCTAATCGCTAAAGCTCAAggg > 1:817642‑M1/68‑91 (MQ=255) ctcttcacctttagtgattagaggcttttatgcagttgctgcacaaacaactgtattcctttactCCCCTAATCGCTAAAGCTCAAGGGGa > 2:568696‑M1/66‑91 (MQ=255) atataATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTGAAGGGGa > 1:1964374/1‑91 (MQ=255) tataATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAg > 2:2141035/1‑91 (MQ=255) ataataAATAGATGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGt < 2:3286604/91‑1 (MQ=255) ataataAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGt > 1:441582/1‑91 (MQ=255) ataataAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGt > 1:2504179/1‑91 (MQ=255) ataataAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGt > 1:2629356/1‑91 (MQ=255) aataaataGAAGCATATAAAGAGAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTaa < 1:3866432/91‑1 (MQ=255) taaataGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAg > 1:1263950/1‑91 (MQ=255) aaataGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAgg < 2:1116538/91‑1 (MQ=255) aaataGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGCAAAgg > 2:278674/1‑91 (MQ=255) ataGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGaa < 2:3621260/91‑1 (MQ=255) ataGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGaa > 2:1170829/1‑91 (MQ=255) taGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAAt < 1:1835346/91‑1 (MQ=255) taGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAAt > 2:1203452/1‑91 (MQ=255) aGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATa < 2:1949076/91‑1 (MQ=255) gAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATAc > 1:2083478/1‑91 (MQ=255) gAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATAc < 2:1213495/91‑1 (MQ=255) tattatatAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACa > 2:334826/5‑91 (MQ=255) aGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAg < 2:341983/91‑1 (MQ=255) gCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAgt < 2:234279/91‑1 (MQ=255) gCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAgt > 1:2306937/1‑91 (MQ=255) gCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAgt < 1:2196832/91‑1 (MQ=255) gCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAgt > 2:415746/1‑91 (MQ=255) taAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGttgttt > 1:1859661/1‑91 (MQ=255) aGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTtgtg < 1:1472174/91‑1 (MQ=255) aGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTtgtg < 1:133182/91‑1 (MQ=255) gAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTgc > 1:97853/1‑91 (MQ=255) aaaaaaaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTgca < 2:1038947/91‑1 (MQ=255) aaaaaaaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTgca < 2:799355/91‑1 (MQ=255) aaaaaaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTgcag < 1:3433669/91‑1 (MQ=255) aaaaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTGTGTgcagca > 2:2806544/1‑91 (MQ=255) aaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAAc > 1:371929/1‑91 (MQ=255) aaCAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAAc < 2:632206/91‑1 (MQ=255) cAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTg > 1:544787/1‑91 (MQ=255) cAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTg < 2:3715148/91‑1 (MQ=255) cAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTg > 1:3191843/1‑91 (MQ=255) aGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGc > 1:3006672/1‑91 (MQ=255) gttgttTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCACGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCa > 2:2966910/1‑91 (MQ=255) gttgttTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCa < 1:2082652/91‑1 (MQ=255) gttgttTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCa < 1:267626/91‑1 (MQ=255) gttgttTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCa > 1:599289/1‑91 (MQ=255) ttgtttgtttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCac > 2:2583009/1‑90 (MQ=255) ttgtttgtttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCAt < 2:2103569/91‑1 (MQ=255) gtttgtttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATaa > 1:2126468/1‑91 (MQ=255) tgtttgtGCAGCAACTGCATAAGAGCCCCTAATCCCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAg < 2:280881/91‑1 (MQ=255) gtttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGc > 1:2714529/1‑91 (MQ=255) tttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGcc > 1:784281/1‑91 (MQ=255) ttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCct < 1:2948717/91‑1 (MQ=255) ttgtGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGAAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCct > 2:3484137/1‑91 (MQ=255) gcagcaACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTaa > 1:1546902/1‑91 (MQ=255) gcagcaACTGCAGAAGAGCCCCTAATCGCGAAAGCTCAAGGGGAGTAAAGGAATACCGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTaa < 1:162065/91‑1 (MQ=255) agcaACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATc < 2:2032322/91‑1 (MQ=255) gcaACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCa > 2:714576/1‑91 (MQ=255) aaCTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACt < 1:393565/91‑1 (MQ=255) aCTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTa < 1:10104/91‑1 (MQ=255) aCTGCAGAAGAGCCCCTAAGCGCTAAAGCGCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTa < 2:1406110/91‑1 (MQ=255) cTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTaa > 2:2377107/1‑91 (MQ=255) tGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTaaa < 1:3316207/91‑1 (MQ=255) gCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAg > 1:1220432/1‑91 (MQ=255) aTAAGAGCCCCTAATCGCTAAAGCTCGAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGt > 2:2242346/1‑91 (MQ=255) aTAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGt > 2:867908/1‑91 (MQ=255) aTAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGt > 2:391416/1‑91 (MQ=255) aTAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGt < 2:1651445/91‑1 (MQ=255) aaGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGa > 1:2430671/1‑91 (MQ=255) agagCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCTACTGCATAAAAGCCTCTAATCACTAAAGGTGaa > 1:3502825/1‑91 (MQ=255) gagCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAag < 2:2288162/91‑1 (MQ=255) agCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAaga > 1:3555138/1‑91 (MQ=255) agCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAaga > 1:2997482/1‑91 (MQ=255) agCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAaga < 1:921551/91‑1 (MQ=255) CCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAAGAgg < 1:1211879‑M1/91‑1 (MQ=255) | CTATTTTCTTTTAGTATGTGGACTTATATAATAAATAGAAGCATATAAAGAAAAAAACAGTTGTTTGTTTGTGCAGCAACTGCATAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTAAAGGAATACAGTTGTTTGTGCAGCAACTGCATAAAAGCCTCTAATCACTAAAGGTGAAGAGG > USA300TCH1516_ALE/672450‑672630 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |