| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 782414 = | 191 (0.940) | 13 (0.070) | 7/140 | NT | 6.6% | intergenic (‑209/+133) | USA300HOU_RS03820/USA300HOU_RS03825 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 782453 = | 202 (1.140) | intergenic (‑248/+94) | USA300HOU_RS03820/USA300HOU_RS03825 | hypothetical protein/hypothetical protein | |||||
Only 100 of 323 total aligned reads displayed.
CTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGTAT > USA300TCH1516_ALE/782324‑782504 | cTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAG < 1:1511755‑M1/91‑1 (MQ=255) ttctgagttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGt > 1:312726‑M1/90‑91 (MQ=255) tAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGT < 2:2916892‑M1/91‑1 (MQ=255) tAAACAAACCTCAAGCGCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGT < 2:2266212‑M1/91‑1 (MQ=255) aaacaaacCACAAGCTCTAAAAAAATTTACTTATGTGCTCTGAAATCTTATGGGATTTAATAGTTGTAAAAAAAATAAAAAAAGGAAAGTA < 2:1174288‑M1/91‑1 (MQ=255) aacaaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTAT > 2:544358‑M1/1‑91 (MQ=255) tgagttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATg < 2:2552244‑M1/5‑1 (MQ=255) caaacCGCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGA < 2:1936337‑M1/91‑1 (MQ=255) agttaaacttttatttacaacatactattactatacattagaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAt < 2:3243678‑M1/7‑1 (MQ=255) gttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAtt < 2:1326921‑M1/8‑1 (MQ=255) aacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATT > 1:2976947‑M1/1‑91 (MQ=255) aacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATT > 1:3278662‑M1/1‑91 (MQ=255) acCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTT > 2:1818061‑M1/1‑91 (MQ=255) acCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTT > 2:3071982‑M1/1‑91 (MQ=255) acCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTT > 1:3711385‑M1/1‑91 (MQ=255) taaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTc > 2:805697‑M1/82‑91 (MQ=255) ccTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTC > 2:1741150‑M1/1‑91 (MQ=255) tCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTa > 2:1761568/1‑91 (MQ=255) tCAAGCTCCAAAAAAATTTACTTATCTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTa < 2:3430599/91‑1 (MQ=255) cAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTAc > 1:3184108/1‑91 (MQ=255) cAAGCTCT‑AAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACa > 2:148321/1‑91 (MQ=255) gCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAg > 2:607469/1‑91 (MQ=255) aaaaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAggg < 1:1396793/91‑1 (MQ=255) aaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAggggg > 1:1887743/1‑91 (MQ=255) aaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAggggg > 2:3947461/1‑91 (MQ=255) aaTTTACTTATGTGCTCTACAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGc > 1:2752227/1‑91 (MQ=255) aTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCt < 1:1210663/91‑1 (MQ=255) tttACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCtg < 2:1620040/91‑1 (MQ=255) tttACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTAAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCtg < 2:2842460/91‑1 (MQ=255) tactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCtgt > 1:2326894‑M1/63‑91 (MQ=255) tactattactatacattacaaatttgtaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCtgt > 1:2093526‑M1/63‑91 (MQ=255) ctattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGa > 2:2542844‑M1/61‑91 (MQ=255) ctattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGa > 1:2377764‑M1/61‑91 (MQ=255) aCTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCacagcccccctagcttgtaga < 1:2508277‑M1/91‑22 (MQ=255) aCTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTga < 1:700891‑M2/91‑3 (MQ=255) tattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGaa > 2:3770384‑M1/60‑91 (MQ=255) cTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTgaa > 1:3041535‑M2/1‑88 (MQ=255) tATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTgaaat < 1:948759‑M2/91‑6 (MQ=255) tATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTgaaat > 2:3612819‑M2/1‑86 (MQ=255) tactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATc > 2:3175595‑M1/57‑91 (MQ=255) tgtgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCacagcccccctagcttgtagaaatca < 1:2902345‑M1/91‑27 (MQ=255) tgtgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCacagcccccctagcttgtagaaatca < 1:995652‑M1/91‑27 (MQ=255) tgtgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTgaaatca > 1:3807471‑M2/1‑84 (MQ=255) gtgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCacagcccccctagcttgtagaaatcat < 1:367656‑M1/91‑28 (MQ=255) gtgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCacagcccccctagcttgtagaaatcat < 1:1044159‑M1/91‑28 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt < 2:2980863/91‑1 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt < 2:1030980/91‑1 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt > 1:1108479/1‑91 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt < 1:900417/91‑1 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt < 1:2816370/91‑1 (MQ=255) gCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCttt > 2:1901570/1‑91 (MQ=255) gCAATCTTATGGGATTTAATAGTTGTATAAATAAAGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCttt < 2:3823301/91‑1 (MQ=255) aTCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTgaaatcatactttccttt > 2:1927731‑M2/1‑73 (MQ=255) aTCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCa > 1:2162974/1‑91 (MQ=255) ttATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTg > 1:3222566/1‑91 (MQ=255) tATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGa < 1:336515/91‑1 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg > 2:2799251/1‑91 (MQ=255) tGGGATTTAATAGTTGTATATATATAGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGt < 2:1119870/91‑1 (MQ=255) gggATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTa > 1:2849987/1‑91 (MQ=255) ggATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTaa > 1:1767503/1‑91 (MQ=255) gATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAAt > 1:1994299/1‑91 (MQ=255) tttAATACTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGa < 1:1960664/91‑1 (MQ=255) aTAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAgtgt > 2:3738994/1‑91 (MQ=255) tAGTTGTATATATATTGAAAAAAGGAACGTATGATTTCTACAAGCTAGGCGGGCTGTGAAATCATACGCTTCCCATTGCGTAATGAGTGTa > 2:3293587/1‑91 (MQ=255) tAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTa > 1:586085/1‑91 (MQ=255) aGTCGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTaa < 1:3191525/91‑1 (MQ=255) gTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAAt > 2:712213/1‑91 (MQ=255) ttGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATg < 2:1097972/91‑1 (MQ=255) gTATATATATTGAAAAAAGGAAAGTATGGTTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGta > 2:94360/1‑91 (MQ=255) gTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGta < 2:1987361/91‑1 (MQ=255) atatatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGCAATGAGTGTACTGtata > 1:3390857/1‑91 (MQ=255) atatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAtt > 1:1425392/1‑91 (MQ=255) atatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAtt > 1:1328725/1‑91 (MQ=255) atataaTGAAAAAAGGAAAGTATGATTTCTACAAGCCAGGGGGGCTGTGAAATCATACGCTGTCCATTGAGTAATGAGTGTAATGTATAtt < 2:204192/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:24073/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 2:86779/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:2224698/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:1623074/91‑1 (MQ=255) tatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTa > 1:3634702/1‑91 (MQ=255) ttGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTaaa < 2:727926/91‑1 (MQ=255) gAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTaaaaa > 2:1642586/1‑91 (MQ=255) gAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTaaaaa < 2:3139123/91‑1 (MQ=255) aaaaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAAtt > 2:3097652/1‑91 (MQ=255) aaaGGAAAGTATGATTTCacagcccccctagctcgtagaaatcatactttccttctttcaatatatatacaactattaaatcccataagat > 2:1927390‑M1/1‑18 (MQ=255) aaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTg > 1:836348/1‑91 (MQ=255) aaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTg > 1:244863/1‑91 (MQ=255) aaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTg > 2:1367619/1‑91 (MQ=255) aGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTa > 1:185806/1‑91 (MQ=255) aGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTa > 1:1572009/1‑91 (MQ=255) ggAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTaa > 2:2078825/1‑91 (MQ=255) ggAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTaa < 1:3460942/91‑1 (MQ=255) gAAAGTATGATTTCTACAAGCTAGTGGGGATGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTTAt < 2:3789008/91‑1 (MQ=255) gAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAAt > 1:1164142/1‑91 (MQ=255) aaaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATg > 1:197735/1‑91 (MQ=255) aaaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATg < 1:1157622/91‑1 (MQ=255) aaaGTATGATTTCTACAAACTAGGGGGGCTGTGAAATCATATGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATg < 2:279381/91‑1 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTTAAAATTTGTAATGt > 1:2642044/1‑91 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGt > 2:2590695/1‑91 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGt > 2:80876/1‑91 (MQ=255) aGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGta > 2:2438883/1‑91 (MQ=255) | CTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGTAT > USA300TCH1516_ALE/782324‑782504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |