| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 842626 | 186 (0.910) | 17 (0.090) | 7/144 | NT | 9.0% | intergenic (+12/‑650) | uvrA/hprK | UvrABC system protein A/HPr kinase/phosphorylase |
| ? | USA300TCH1516_ALE | = 842653 | 175 (0.960) | intergenic (+39/‑623) | uvrA/hprK | UvrABC system protein A/HPr kinase/phosphorylase | |||||
Only 100 of 315 total aligned reads displayed.
TCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTA > USA300TCH1516_ALE/842536‑842716 | tCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAG < 1:116832‑M1/91‑1 (MQ=255)tCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAG < 1:2145397‑M1/91‑1 (MQ=255) cAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGt < 1:1809480/91‑1 (MQ=255) gACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGa > 1:2783521/1‑91 (MQ=255) aCAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGaa > 2:1687878/1‑91 (MQ=255) cAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAg > 2:344036/1‑91 (MQ=255) cAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAg > 2:1270036/1‑91 (MQ=255) aGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGACCGAGATAAACAAAATACTGAAGATAAATACGATTAAAAGAAGTGAAGGAt > 2:3249995/1‑91 (MQ=255) aGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGAt > 2:3576696/1‑91 (MQ=255) gTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATg > 1:2119299/1‑91 (MQ=255) tcatcaTATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGt < 1:683588/91‑1 (MQ=255) atcatATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTta > 1:1531217/1‑91 (MQ=255) catATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTtata < 2:1852178/91‑1 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATaa > 1:2961413/1‑91 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATaa < 2:3102513/91‑1 (MQ=255) atatACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATaa < 2:2749711/91‑1 (MQ=255) aCAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAAatt > 1:402179/1‑91 (MQ=255) cAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGtgaaggataaatttataaca < 2:136682‑M1/91‑21 (MQ=255) aGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTAt > 2:673707/1‑91 (MQ=255) aaaGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCt > 2:846672/1‑91 (MQ=255) aGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTc < 2:1083136/91‑1 (MQ=255) aGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTc > 1:2586524/1‑91 (MQ=255) gTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGGAGGATGTTATAAATTTATCCTTCg > 1:2250897/1‑91 (MQ=255) gTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCg > 2:2401239/1‑91 (MQ=255) gTATTTAAAAGAAGTACTTGAACGAGATAA‑CAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc > 1:3093056‑M2/1‑90 (MQ=255) tATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc < 2:206396‑M2/91‑2 (MQ=255) tATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGc > 1:2296653‑M2/1‑90 (MQ=255) aacataattctttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGct > 1:1235019‑M1/55‑91 (MQ=255) aTTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGct < 2:2596131‑M2/91‑3 (MQ=255) tttAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcactt < 2:1974836‑M1/91‑31 (MQ=255) tttAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAATGATGTTATAAATTTATCCTTCGctt < 1:3671353‑M2/91‑4 (MQ=255) acataattctttttacgcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGctt > 1:581344‑M1/54‑91 (MQ=255) ttAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcacttc < 1:2202954‑M1/91‑32 (MQ=255) ttAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcacttc < 1:1990476‑M1/91‑32 (MQ=255) tAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGcttct < 2:1643236‑M2/91‑6 (MQ=255) aaaaGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGcttctt < 1:1331570‑M2/91‑7 (MQ=255) attctttttacgcatcttatctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCtttt > 2:457367‑M1/49‑91 (MQ=255) agaagTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCttttt > 1:2516125/1‑91 (MQ=255) gaagTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTtta > 1:2914394/1‑91 (MQ=255) aagTACTTGAACGAGATAAACAAATTACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCATTCGCTTCTTTttat > 2:3305033/1‑91 (MQ=255) aagTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttat < 1:1963876/91‑1 (MQ=255) agTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAATGATGTTATAAATTTATCCTTCGCTTCTTTttatt > 2:3447452/1‑91 (MQ=255) agTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttatt > 2:69642/1‑91 (MQ=255) agTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTttatt > 1:1988549/1‑91 (MQ=255) gTACTTGAACGAGATAAACAAAATCCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATATATCCTTCGCTTCTTTttatta > 2:2440981/1‑91 (MQ=255) gTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGATATAAATTTATCCTTCGCTTCTtattataa > 2:1830834/1‑89 (MQ=255) aCTTGAACGAGATAAATAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAt < 2:3031156/91‑1 (MQ=255) aCTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAt > 1:3407083/1‑91 (MQ=255) aCTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAt > 1:1724635/1‑91 (MQ=255) cTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAtt > 2:336874/1‑91 (MQ=255) ttGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGcgaaggataaatttataacatccttcacttcttttaatcttatt < 1:821047‑M1/91‑45 (MQ=255) ttGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAAttt < 1:2225652/91‑1 (MQ=255) gcatcttttctttctactattcattactaaattaataAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAg > 1:3931082‑M1/38‑91 (MQ=255) aCGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTa < 2:404599/91‑1 (MQ=255) aCGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTa < 2:2903430/91‑1 (MQ=255) gagaTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAAt < 2:1466778/91‑1 (MQ=255) agaTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATg < 2:2185163/91‑1 (MQ=255) gaTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGa > 1:3697898/1‑91 (MQ=255) aTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGaa < 2:1291030/91‑1 (MQ=255) aTAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGaa < 1:3457303/91‑1 (MQ=255) aaaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAta > 1:1880762/1‑91 (MQ=255) aaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtag < 1:3000447/91‑1 (MQ=255) aaCAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtag > 1:77753/1‑91 (MQ=255) cAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagta < 1:2866756/91‑1 (MQ=255) cAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAAtagta < 2:2109323/91‑1 (MQ=255) tACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATCAATTTAGTAATGAATAGTagaaag > 2:1311100/1‑91 (MQ=255) aCTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaaga < 2:3058419/91‑1 (MQ=255) cTGAAGATAAATAAGATTAAAAGAAGTGATGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaagaa < 1:3172727/91‑1 (MQ=255) cTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaagaa > 2:484091/1‑91 (MQ=255) cTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTGATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTagaaagaa < 2:1535100/91‑1 (MQ=255) tGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAgaaagaaa > 1:2669559/1‑91 (MQ=255) gAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaa > 1:936050/1‑91 (MQ=255) gAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaa > 2:2800386/1‑91 (MQ=255) gAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaa > 2:1146904/1‑91 (MQ=255) aGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGaaagaaaaga > 1:376620/1‑91 (MQ=255) aaataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCg < 2:288908/91‑1 (MQ=255) aataaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGt < 2:35047/91‑1 (MQ=255) taaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaa > 2:2583247/1‑91 (MQ=255) aaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa < 1:1466733/91‑1 (MQ=255) aaGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTaaa > 1:3594951/1‑91 (MQ=255) tAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGaa < 2:3861711/91‑1 (MQ=255) AAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAAt < 2:2496281‑M1/91‑1 (MQ=255) AAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAAt > 2:3897533‑M1/1‑91 (MQ=255) aaaGAAGcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttt > 2:2307644‑M1/1‑7 (MQ=255) aaaGAAGcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttt > 2:2257292‑M1/1‑7 (MQ=255) AAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGCATAGTAGAAAGAAAAGATGCGTAAAACGAATTa < 2:1264891‑M1/91‑1 (MQ=255) gaagcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaa < 2:591552‑M1/91‑88 (MQ=255) gaagcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaa < 2:912361‑M1/91‑88 (MQ=255) gaagTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaa < 1:2202966‑M2/91‑61 (MQ=255) GAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATg < 2:465155‑M1/91‑1 (MQ=255) aagTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaa < 2:3757149‑M2/91‑62 (MQ=255) aagTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaa < 2:1976013‑M2/91‑62 (MQ=255) AAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGt > 1:3269587‑M1/1‑91 (MQ=255) agcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaat > 2:316945‑M1/1‑2 (MQ=255) agcgaaggataaatttataacatccttcacttcttttaatcttatttatattcagtattttgtttatctcgttcaagtacttcttttaaat > 2:3468191‑M1/1‑2 (MQ=255) gcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 1:1608977‑M1/91‑91 (MQ=255) gcgaaggataaatttataacatccttcacttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata > 2:737209‑M1/1‑1 (MQ=255) gTGAAGGATGTTATAAATTTATCCTTCGcttcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 2:1178298‑M2/91‑64 (MQ=255) gTGAAGGATGTTATAAATTTATCCTTCActtcttttaatcttatttatcttcagtattttgtttatctcgttcaagtacttcttttaaata < 1:3208482‑M2/91‑64 (MQ=255) GTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTa < 2:3651910‑M1/91‑1 (MQ=255) | TCAGACAAAGTCATCATATACAGGAAAGTATTTAAAAGAAGTACTTGAACGAGATAAACAAAATACTGAAGATAAATAAGATTAAAAGAAGTGAAGGATGTTATAAATTTATCCTTCGCTTCTTTTTATTAATTTAGTAATGAATAGTAGAAAGAAAAGATGCGTAAAAAGAATTATGTTA > USA300TCH1516_ALE/842536‑842716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |