| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 893187 | 176 (0.860) | 13 (0.080) | 9/136 | NT | 7.9% | intergenic (+188/‑62) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 |
| ? | USA300TCH1516_ALE | = 893199 | 155 (0.900) | intergenic (+200/‑50) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 | |||||
Only 100 of 325 total aligned reads displayed.
CGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGA > USA300TCH1516_ALE/893097‑893277 | cGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAT > 1:167414‑M1/1‑91 (MQ=255) tttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAAt < 2:2490117‑M1/12‑1 (MQ=255) tttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAAt > 2:3704126‑M1/80‑91 (MQ=255) tttagtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaacaaaaaaTGCTTTCTCAAt < 2:1570880‑M1/12‑1 (MQ=255) ggCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAtt > 2:2213478/1‑91 (MQ=255) gCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAttt < 2:3241140/91‑1 (MQ=255) aaCCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAAttttt < 1:374003/91‑1 (MQ=255) gtccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAAttttt > 1:1227131‑M1/76‑91 (MQ=255) ccgatattctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCt > 1:1699489‑M1/74‑91 (MQ=255) gTCTTATATAGAAATGGTGCCAATTCACATCCAGTTTTCACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTaa > 2:33530/1‑90 (MQ=255) gTCATATATAGAAATGGTGACAATTCCCATAAAGTCTTAACTTTTGACGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTAt > 2:3143102/1‑91 (MQ=255) tatataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATatcgatagaaaa < 2:1874619‑M1/91‑13 (MQ=255) tatataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGat < 1:698386/91‑1 (MQ=255) tatataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGat < 1:2956805/91‑1 (MQ=255) atataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATatcgatagaaaaa < 2:2889621‑M1/91‑14 (MQ=255) atataGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATatcgatagaaaaa < 2:2776124‑M1/91‑14 (MQ=255) tctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGata > 1:3261280‑M1/67‑91 (MQ=255) tttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATAtt > 1:51804‑M1/65‑91 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGTAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaa > 2:3549140‑M2/1‑83 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaa < 1:416859‑M2/91‑9 (MQ=255) aTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaa > 1:2452385‑M2/1‑82 (MQ=255) ggTACCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgtgaaagc > 1:3070311‑M2/1‑80 (MQ=255) gTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaagca > 1:833955‑M2/1‑79 (MQ=255) gTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaagca < 2:2251651‑M2/91‑13 (MQ=255) cttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGc > 1:2753987‑M1/57‑91 (MQ=255) tGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAt > 2:3896691/1‑91 (MQ=255) gCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtt > 2:1274479/1‑91 (MQ=255) ccAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttt < 1:2305452/91‑1 (MQ=255) ccAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttt > 1:326395/1‑91 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttt > 2:1587413/1‑91 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttt < 2:2119899/91‑1 (MQ=255) aaTTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttttt < 1:57562/91‑1 (MQ=255) tCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttat > 2:2766995/1‑91 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 1:2603960/91‑1 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 1:1944135/91‑1 (MQ=255) acaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttattt > 1:2353112/1‑91 (MQ=255) acaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttattt > 2:1121129/1‑91 (MQ=255) caTAAAGTTGTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttt < 1:3782438/91‑1 (MQ=255) aTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttta > 1:1594173/1‑91 (MQ=255) aTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttta > 1:1349504/1‑91 (MQ=255) tAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTtttattttat > 2:1357045/1‑91 (MQ=255) aaaGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTttattttatt > 2:1386227/1‑91 (MQ=255) aaGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTttatta > 2:2949614/1‑91 (MQ=255) ttttAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGc < 1:1981262/91‑1 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca < 2:1932190/91‑1 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca > 1:2994189/1‑91 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca > 1:2993171/1‑91 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca > 1:1168421/1‑91 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca < 1:3189280/91‑1 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca < 2:65075/91‑1 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAgg > 2:1423472/1‑91 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAgg < 2:3746668/91‑1 (MQ=255) ttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAggg < 1:3659738/91‑1 (MQ=255) ttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAggg > 2:1027233/1‑91 (MQ=255) tGAAGATGAGAGAAA‑TAATACTACTGCTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGgga < 2:3419400/91‑1 (MQ=255) aaGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggagg > 2:1798991/1‑91 (MQ=255) aaGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggagg > 2:8917/1‑91 (MQ=255) aTGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAAt > 1:278789/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 2:1290914/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc < 1:1858787/91‑1 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 1:3465765/1‑91 (MQ=255) gagaAAGCAATAGTAGTATTG‑TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAAc > 1:790299/1‑91 (MQ=37) gaAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGt < 2:2651840/91‑1 (MQ=255) aaa‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTg > 1:312394/1‑91 (MQ=255) aa‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGa < 1:2183097/91‑1 (MQ=255) aa‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGa > 1:3722568/1‑91 (MQ=255) aa‑CAATACTACTATTGCTTTCTCAATATTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATTAACGTGa < 2:3643409/91‑1 (MQ=255) cAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGAtt < 2:2383124/91‑1 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg < 2:7601/91‑1 (MQ=255) actactATTGCTTTCTCAATTATTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAAt > 2:130889/1‑91 (MQ=255) ctactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAAtt > 1:1790205/1‑91 (MQ=255) ctactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAAtt > 1:3616889/1‑91 (MQ=255) tactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTa > 2:2267449/1‑91 (MQ=255) actaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaa < 2:3527673/91‑1 (MQ=255) taTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaaa < 2:1444638/91‑1 (MQ=255) aTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaag < 2:3812140/91‑1 (MQ=255) TGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaagaa < 2:1747293‑M1/91‑1 (MQ=255) TGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaagaa > 1:2212777‑M1/1‑91 (MQ=255) TGCTTTCTCAATTTTTCTATCGACGTTGAGAAAGCATTTTTTATTTTATTGAGCCACACAGGGAGGAATCAACGTGATTGAATAAAaagaa > 2:3680277‑M1/1‑91 (MQ=255) gCTTTCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacc > 2:3948710‑M1/1‑11 (MQ=255) gCTTTCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacc > 2:1532057‑M1/1‑11 (MQ=255) GCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaagaag > 1:2500904‑M1/1‑91 (MQ=255) cTTTCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacca < 1:813872‑M1/91‑82 (MQ=255) cTTTCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacca < 1:2284059‑M1/91‑82 (MQ=255) cTTTCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacca < 1:164572‑M1/91‑82 (MQ=255) cTTTCTCAATTTTTCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacca < 2:2809779‑M2/91‑70 (MQ=255) tttCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccat > 1:2173630‑M1/1‑9 (MQ=255) tttCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccat > 1:1838854‑M1/1‑9 (MQ=255) TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgtt > 1:3226075‑M1/1‑91 (MQ=255) ttCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatt < 1:2462141‑M1/91‑84 (MQ=255) ttCTCAATatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatt < 2:3036126‑M1/91‑84 (MQ=255) TCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgttgt < 1:101753‑M1/91‑1 (MQ=255) CTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgttgtt < 2:3451848‑M1/91‑1 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa > 1:2081553‑M1/1‑91 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa < 2:1741793‑M1/91‑1 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa < 2:1740111‑M1/91‑1 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa < 1:1545258‑M1/91‑1 (MQ=255) tttttCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 1:3196777‑M2/91‑79 (MQ=255) tatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 1:2038696‑M1/91‑91 (MQ=255) tatcgatagaaaaattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 1:677444‑M1/91‑91 (MQ=255) | CGGCAACCGTCTTATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGA > USA300TCH1516_ALE/893097‑893277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |