| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 893187 | 176 (0.860) | 13 (0.080) | 9/136 | NT | 7.9% | intergenic (+188/‑62) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 |
| ? | USA300TCH1516_ALE | = 893199 | 155 (0.900) | intergenic (+200/‑50) | trxA_1/metN2 | Thioredoxin/Methionine import ATP‑binding protein MetN 2 | |||||
Only 100 of 277 total aligned reads displayed.
TATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACTAA > USA300TCH1516_ALE/893109‑893289 | tctttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGata > 1:3261280‑M1/67‑91 (MQ=255) tttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATAtt > 1:2616751‑M1/65‑91 (MQ=255) tttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATAtt > 1:51804‑M1/65‑91 (MQ=255) tttaacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATAtt > 2:2882762‑M1/65‑91 (MQ=255) taGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattg < 1:664893‑M2/91‑5 (MQ=255) taGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattg > 1:2990870‑M2/1‑87 (MQ=255) taacaacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaagaaataaTGCTTTCTCAATTTTTCTATCGATATTga > 2:3453304‑M1/63‑91 (MQ=255) gAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgag > 1:3127542‑M2/1‑85 (MQ=255) gAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgag < 1:3775901‑M2/91‑7 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaa < 1:2461408‑M2/91‑9 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaa > 2:3681726‑M2/1‑83 (MQ=255) aaTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaa < 1:416859‑M2/91‑9 (MQ=255) aTGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaa > 1:2173630‑M2/1‑82 (MQ=255) tGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaag < 1:229209‑M2/91‑11 (MQ=255) tGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaag < 1:164572‑M2/91‑11 (MQ=255) aacttcttttaattcaatcacgttgattcctccctgtgttgcttaataaaataaaaaaTGCTTTCTCAATTTTTCTATCGATATTGAGaaa > 1:1820588‑M1/59‑91 (MQ=255) ggTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaagc > 2:1532057‑M2/1‑80 (MQ=255) ggTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATattgagaaagc > 2:3948710‑M2/1‑80 (MQ=255) tGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAt < 1:1885240/91‑1 (MQ=255) gCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtt > 1:2774826/1‑91 (MQ=255) ccAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttt < 2:1636451/91‑1 (MQ=255) ccAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttt > 1:326395/1‑91 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttt > 2:969820/1‑91 (MQ=255) cAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttt < 2:2119899/91‑1 (MQ=255) aaTTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAttttt < 2:2215944/91‑1 (MQ=255) aTTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttttt > 1:81314/1‑91 (MQ=255) aTTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAtttttt < 1:1563318/91‑1 (MQ=255) ttCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTtttta < 1:2392515/91‑1 (MQ=255) tCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttat > 2:2766995/1‑91 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 1:1944135/91‑1 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt < 1:2490238/91‑1 (MQ=255) cacaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatt > 2:2425733/1‑91 (MQ=255) acaTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttattt > 2:2625826/1‑91 (MQ=255) aTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttta > 1:1594173/1‑91 (MQ=255) aTAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTttttatttta < 2:1746830/91‑1 (MQ=255) tAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTGCTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTtttattttat < 2:2257746/91‑1 (MQ=255) tAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTtttattttat > 2:1356935/1‑91 (MQ=255) aaaGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTttattttatt > 2:1386211/1‑91 (MQ=255) aaGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCCTTTTTTATTttatta > 2:2767181/1‑91 (MQ=255) gTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAg > 1:1435180/1‑91 (MQ=255) ttttAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGc < 1:1981596/91‑1 (MQ=255) tAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAac > 2:1957239/1‑91 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca > 1:1168421/1‑91 (MQ=255) aaCTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAaca > 1:2993291/1‑91 (MQ=255) cTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAAcaca < 2:65075/91‑1 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTTTTATGCAACACAgg > 2:1903082/1‑91 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAgg > 2:1423496/1‑91 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAgg > 2:859543/1‑91 (MQ=255) tttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAgg < 2:3746668/91‑1 (MQ=255) ttGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAggg > 1:3056641/1‑91 (MQ=255) tGAAGATGAGAGAAA‑TAATACTACTGCTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGgga < 2:3419400/91‑1 (MQ=255) tGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGgga < 1:896954/91‑1 (MQ=255) aGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGggagga > 1:28868/1‑91 (MQ=255) aTGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAAt > 1:278789/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 2:1290914/1‑91 (MQ=255) tGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATc > 1:3465765/1‑91 (MQ=255) tgagaAAGCAATAGTAGTATTG‑TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCaa > 1:1290904/2‑91 (MQ=37) gagaAAGCAATAGTAGTATTG‑TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAAc > 1:790234/1‑91 (MQ=37) agaAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACg > 1:3642818/1‑91 (MQ=255) aa‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGa > 1:3722568/1‑91 (MQ=255) agcAATAGTAGTATTG‑TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGAt > 1:2542743/3‑91 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg > 2:2953646/1‑91 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg < 2:7601/91‑1 (MQ=255) aaTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTg > 2:1748085/1‑91 (MQ=255) aTACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGa > 2:1801599/1‑91 (MQ=255) actactATTGCTTTCTCAATTATTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAAt > 2:130889/1‑91 (MQ=255) ctactaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAAtt > 1:3616889/1‑91 (MQ=255) actaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaa < 2:3527673/91‑1 (MQ=255) actaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaa < 1:2195409/91‑1 (MQ=255) ctaTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaa > 2:2291196/1‑91 (MQ=255) taTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTaaaa < 2:1444570/91‑1 (MQ=255) aTTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCAGTTTTTATTTTAGTAAGCAACACACGGAGGAATCAACGTGATTGAATTAAaag < 2:3811715/91‑1 (MQ=255) TGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaagaa > 1:2212777‑M1/1‑91 (MQ=255) GCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAaagaag > 2:3125816‑M1/1‑91 (MQ=255) cTTTCTCAATTTTTCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcacca < 2:2809779‑M2/91‑70 (MQ=255) TTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgtt > 1:3226075‑M1/1‑91 (MQ=255) tctcAATTTTTCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccattt < 1:688743‑M2/91‑73 (MQ=255) TCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgttgt < 1:101753‑M1/91‑1 (MQ=255) TCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAgttgt > 2:3561119‑M1/1‑91 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa < 1:1850553‑M1/91‑1 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa > 1:2081553‑M1/1‑91 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa > 1:2340166‑M1/1‑91 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa < 2:1741334‑M1/91‑1 (MQ=255) CAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTaa > 2:2554998‑M1/1‑91 (MQ=255) aTTTTTCTATCGATattgagaaagcaatagtagtattgttcctctcatcttcaaaagttaaaacttcatgtgaattggcaccatttctata < 2:3670674‑M2/91‑78 (MQ=255) ATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAg > 1:3083882‑M1/1‑91 (MQ=255) tttttCTATCGTGAGTGCGAGAGCATTTTGTAGTTGATTAAGCAAACCAGTGAGGACTCCACGTTATTGAATTAAAAGAAGTTGTTAAAGa < 2:1409941/91‑1 (MQ=255) tttttCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 2:2889621‑M2/91‑79 (MQ=255) tttttCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 2:1127875‑M2/91‑79 (MQ=255) tttttCTATCGATattgagaaagcaatagtagtattgtttctctcatcttcaaaagttaaaactttatgtgaattggcaccatttctatat < 1:3196777‑M2/91‑79 (MQ=255) tCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAatat < 2:1086180/91‑1 (MQ=255) tCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAatat < 2:1055977/91‑1 (MQ=255) tCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATAAACGTGATTGAATTAAAAGAAGTTGTTAAAGAatat > 2:3908847/1‑91 (MQ=255) aTCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCgg > 1:2040484/1‑91 (MQ=255) tCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGTGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGa < 1:1696377/91‑1 (MQ=255) tCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGa > 1:2117559/1‑91 (MQ=255) gATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACt < 2:2318881/91‑1 (MQ=255) tatTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACTaa > 1:3475970/1‑91 (MQ=255) tatTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACTaa < 2:387231/91‑1 (MQ=255) tatTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACTaa > 1:3476295/1‑91 (MQ=255) | TATATAGAAATGGTGCCAATTCACATAAAGTTTTAACTTTTGAAGATGAGAGAAA‑CAATACTACTATTGCTTTCTCAATTTTTCTATCGATATTGAGAAAGCATTTTTTATTTTATTAAGCAACACAGGGAGGAATCAACGTGATTGAATTAAAAGAAGTTGTTAAAGAATATCGGACTAA > USA300TCH1516_ALE/893109‑893289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |