| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 971887 = | 174 (0.850) | 8 (0.040) | 5/140 | NT | 5.0% | coding (973/1317 nt) | cdr | Coenzyme A disulfide reductase |
| ? | USA300TCH1516_ALE | 971952 = | 149 (0.840) | coding (908/1317 nt) | cdr | Coenzyme A disulfide reductase | |||||
Only 100 of 234 total aligned reads displayed.
GAGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGCCCCAAGC > USA300TCH1516_ALE/971797‑971977 | tgcaataggcgatattgcaacatcacattgtcgacatgtcggtctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagt > 2:2928406‑M1/91‑91 (MQ=255)gAGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAat < 1:3433489/91‑1 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata < 1:2064785/91‑1 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata < 1:1103535/91‑1 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata < 1:523009/91‑1 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata > 1:352951/1‑91 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata > 1:3853305/1‑91 (MQ=255) aGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATATATAATCAAAGAACTTCACAata < 2:447172/91‑1 (MQ=255) aGTGACTACTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAata < 1:1965480/91‑1 (MQ=255) gTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAatat > 1:2839001/1‑91 (MQ=255) tGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAtt > 1:3795689/1‑91 (MQ=255) gACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAttg > 2:782945/1‑91 (MQ=255) ataggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagTAttg > 1:3384378‑M1/87‑91 (MQ=255) ataggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagTAttg > 1:3661048‑M1/87‑91 (MQ=255) taggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagTAttgt > 1:1405912‑M1/86‑91 (MQ=255) aCTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAttgt < 1:35750/91‑1 (MQ=255) aCTTCTACCATTTTATAGTCAAACTGCTTCAGTCCGGATCGACTCACGCCTACACTCGCAAATGTATAATCAAAGAACTTCACAATAttgt < 2:145483/91‑1 (MQ=255) cTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAttgtt > 1:1295800/1‑91 (MQ=255) cTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAttgtt > 2:1933940/1‑91 (MQ=255) cTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATAttgtt > 2:2678211/1‑91 (MQ=255) ggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggtgcgctcaccgtgcagtaagTAttgttg < 1:782945‑M1/8‑1 (MQ=255) ggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagTAttgttg > 1:3869228‑M1/84‑91 (MQ=255) ggcgatattgcaacatcacattatcgacatgtcgatctaccggctagtgttcctttagcttggggcgctcaccgtgcagcaagTAttgttg < 1:3929540‑M1/8‑1 (MQ=255) tCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGc > 1:1020553/1‑91 (MQ=255) tCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGc > 2:1740654/1‑91 (MQ=255) aCCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTa < 1:148524/91‑1 (MQ=255) aTTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTaaga > 1:689194/1‑91 (MQ=255) tttATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCGTaagaag > 2:3500692/1‑91 (MQ=255) tttATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTaagaag > 1:1740583/1‑91 (MQ=255) ttATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGc < 1:1919073/91‑1 (MQ=255) ttATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGc < 2:1207336/91‑1 (MQ=255) ttATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGc < 2:2387184/91‑1 (MQ=255) tataGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGcc < 1:2423365/91‑1 (MQ=255) taGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCtt < 1:1771461/91‑1 (MQ=255) gTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTg < 2:314503/91‑1 (MQ=255) gTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTg < 2:1641891/91‑1 (MQ=255) aaTTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAAtt < 2:2216120/91‑1 (MQ=255) aTTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTc < 2:687605/91‑1 (MQ=255) gCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAAt > 2:652618/1‑91 (MQ=255) gCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAAt > 1:179905/1‑91 (MQ=255) tttAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAg > 1:31095/1‑91 (MQ=255) tttAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAg > 2:2308045/1‑91 (MQ=255) ttAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGCACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAgt > 2:3283271/1‑91 (MQ=255) ttAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAgt < 2:847481/91‑1 (MQ=255) tAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAgtg < 1:238169/91‑1 (MQ=255) tttCGTTTGGTTTATCGCCGTCACTCGTAAATGTATTATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCTTTTGAATTCAATAGTGTc < 2:2080465/90‑1 (MQ=255) tCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCAt < 1:1325252/91‑1 (MQ=255) tttGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTc > 2:3041379/1‑91 (MQ=255) tttGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTc > 1:2943229/1‑91 (MQ=255) ttGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTcc < 2:860020/91‑1 (MQ=255) tGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCa > 2:2430452/1‑91 (MQ=255) ggTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAg < 2:3618094/91‑1 (MQ=255) gTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGc < 2:3729340/91‑1 (MQ=255) tttAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCa < 1:1304565/91‑1 (MQ=255) tttAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCa < 1:1119764/91‑1 (MQ=255) tAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAt < 1:981306/91‑1 (MQ=255) aaCGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAtt > 1:3335770/1‑91 (MQ=255) aCGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAttt > 2:645186/1‑91 (MQ=255) aCGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAttt > 1:3173937/1‑91 (MQ=255) aCGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAttt > 2:2707232/1‑91 (MQ=255) aCGCCGACACTCGCAAATGTATAATCAAACAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAAttt > 2:3446900/1‑91 (MQ=255) cGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTg < 2:2263105/91‑1 (MQ=255) cGCCGACACGCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTg < 1:3798086/91‑1 (MQ=255) gACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCg > 1:1615/1‑91 (MQ=255) ttcctttagcttggggcgctcaccgtgcagcaagTATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCgg > 1:3736924‑M1/35‑91 (MQ=255) tcctttagcttggggcgctcaccgtgcagcaagTATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGc > 1:1513493‑M1/34‑91 (MQ=255) cacTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGc > 1:2783450/1‑91 (MQ=255) cctttagcttggggcgctcaccgtgcagcaagTATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGca > 1:1611819‑M1/33‑91 (MQ=255) acTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGca < 1:637641/91‑1 (MQ=255) acTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGca > 2:3587805/1‑91 (MQ=255) ctttagcttggggcgctcaccgtgcagcaagTATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGcaa > 1:56309‑M1/32‑91 (MQ=255) cTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGcaa > 2:1311891/1‑91 (MQ=255) tttagcttggggcgctcaccgtgcagcaagTATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGcaac > 2:531280‑M1/31‑91 (MQ=255) tCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAAATCAATAGTGTCATTTCCAGCAATTTGTTCGGcaac < 2:892882/91‑1 (MQ=255) aaTGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATAc < 2:873184/91‑1 (MQ=255) aTGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACt < 1:1200496/91‑1 (MQ=255) tGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACtt < 2:1442053/91‑1 (MQ=255) gTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTtg < 1:2297060/91‑1 (MQ=255) gTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTtg > 2:1149167/1‑91 (MQ=255) gTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGACAACAATACTtg < 1:267352/91‑1 (MQ=255) tataATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTtgc > 1:1192346/1‑91 (MQ=255) ataATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTtgct < 1:853912/91‑1 (MQ=255) ataATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTtgct > 2:1032167/1‑91 (MQ=255) aaaGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACgg < 2:1953505/91‑1 (MQ=255) aaaGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACgg < 2:3140030/91‑1 (MQ=255) aaGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGt > 2:346083/1‑91 (MQ=255) aaGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGt < 1:1837897/91‑1 (MQ=255) aGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAACAATTTGTTCGGCAACAATACTTGCTGCACGGTg > 1:1574186/1‑91 (MQ=255) aaCTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAg < 2:1844325/91‑1 (MQ=255) aCTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAgc > 1:1872059/1‑91 (MQ=255) aCTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAgc > 1:1155310/1‑91 (MQ=255) aCTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAgc < 1:1037631/91‑1 (MQ=255) cTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCGGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAgcg > 2:1376585/1‑91 (MQ=255) cTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAgcg < 1:2225801/91‑1 (MQ=255) cacaATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGccc > 2:3943725/1‑91 (MQ=255) cacaATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGccc < 1:1135097/91‑1 (MQ=255) acaATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGcccc > 2:2865527/1‑91 (MQ=255) caATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGCCCCa < 1:1089615/91‑1 (MQ=255) caATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGCCCCa < 2:2286444/91‑1 (MQ=255) caATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGGGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGCCCCa < 2:3127247/91‑1 (MQ=255) | GAGTGACTTCTACCATTTTATAGTCAAATTGCTTTAGTTCGTTTGGTTTAACGCCGACACTCGCAAATGTATAATCAAAGAACTTCACAATATTGTTGCCTAAGAAGCCTTTGAATTCAATAGTGTCATTTCCAGCAATTTGTTCGGCAACAATACTTGCTGCACGGTGAGCGCCCCAAGC > USA300TCH1516_ALE/971797‑971977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |