| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 987447 | 185 (0.910) | 25 (0.150) | 12/128 | NT | 13.9% | intergenic (+20/+35) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 987456 | 162 (1.000) | intergenic (+29/+26) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein | |||||
Only 100 of 307 total aligned reads displayed.
ATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTA > USA300TCH1516_ALE/987357‑987537 | aTGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAAC > 1:15714‑M1/1‑91 (MQ=255)aTGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAAC < 1:2913486‑M1/91‑1 (MQ=255) gCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACgt > 2:1344290/1‑91 (MQ=255) aTGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACgttgt < 2:2424832/91‑1 (MQ=255) aTGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACgttgt > 1:2018441/1‑91 (MQ=255) tGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACgttgtt < 2:2366005/91‑1 (MQ=255) gAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGttt < 1:2873575/91‑1 (MQ=255) aaGTAATATCTTAGGATTCGGTGCACATAACGCAGTATTAGTATTCAAGAAATTTTAAGCATAACTATAAAGATCTTCAGTAACGTTGttt < 2:2766296/90‑1 (MQ=255) aGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaa < 2:1715569‑M1/91‑9 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaac < 2:1413632‑M1/91‑10 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaac < 2:879274‑M1/91‑10 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaac < 2:275312‑M1/91‑10 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaac < 2:213193‑M1/91‑10 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa > 1:3755576/1‑91 (MQ=255) gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa < 1:2816357/91‑1 (MQ=255) tAATAGCTTAGGATTCGGTGTACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaacg < 1:2299367‑M1/91‑11 (MQ=255) tAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAg < 2:2764117‑M2/91‑2 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt > 2:2047662‑M2/1‑89 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt < 1:856512‑M2/91‑3 (MQ=255) gCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaacgttact < 1:2092044‑M1/91‑16 (MQ=255) tAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaacgttactgaa < 1:1010475‑M1/91‑19 (MQ=255) aGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaag < 2:2474957‑M2/91‑11 (MQ=255) gATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaacgttactgaagat < 2:3679371‑M1/91‑22 (MQ=255) aTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatt > 1:3894819‑M2/1‑78 (MQ=255) aTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatt > 2:1472300‑M2/1‑78 (MQ=255) cGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagattttt < 1:1522172‑M2/91‑17 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:2516095/1‑91 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:3772978/1‑91 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:1898112/1‑91 (MQ=255) tGGACATAACGTAGTATTAGTATTTAAGAGTTTTTAAGCATAACTATAAAATTCTTCAGTAGCGTTGTTTTAGTTACTGAAGATTTTTTCa < 2:1886461/91‑1 (MQ=255) tGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCa > 2:271695/1‑91 (MQ=255) tGGACAGAACGCAGTATTAGTATGCGAGAAATTTGAAGCATATCTATAAAAAGCTTCAGTAGCGTTGTTTTAGTTACTGAAGGTTTTTTCa < 2:2435448/91‑1 (MQ=255) gACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagt < 2:607667‑M2/91‑22 (MQ=255) cATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGttt > 2:3262106/1‑91 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt < 2:1293638/91‑1 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt < 1:2263255/91‑1 (MQ=255) aCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCttt > 1:105882/1‑91 (MQ=255) aCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCttt > 1:3122510/1‑91 (MQ=255) cGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTta < 2:3885208/91‑1 (MQ=255) gCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTtat < 2:3336161/91‑1 (MQ=255) gtattagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaa < 1:794208‑M1/91‑42 (MQ=255) tattagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTa > 1:1286304/1‑91 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa < 1:242092/91‑1 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa > 2:1960481/1‑91 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa < 1:1723442/91‑1 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg < 1:1472244/91‑1 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg < 2:1577187/91‑1 (MQ=255) tagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGa < 1:2388772/91‑1 (MQ=255) tagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGa > 1:3626277/1‑91 (MQ=255) gtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATg < 1:1783587/91‑1 (MQ=255) gtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATg > 1:3294868/1‑91 (MQ=255) attCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAg > 1:406609/1‑91 (MQ=255) ttCAAGAAATTTGAAGCATAACTATAGAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGc < 2:2648588/91‑1 (MQ=255) tCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCg > 2:1850180/1‑91 (MQ=255) tCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCg > 1:1353004/1‑91 (MQ=255) cAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGa > 2:456382/1‑91 (MQ=255) cAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGa > 2:2003835/1‑91 (MQ=255) aaGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGAc > 1:3653837/1‑91 (MQ=255) gAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGTGACAg < 2:659087/91‑1 (MQ=255) aaTTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTCGAGTTACTGAAGATTGTTTCATTTGCTTTATCCTAAGAGGAGCGACAGca < 2:3806088/91‑1 (MQ=255) tttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGcaca > 1:1547649/1‑91 (MQ=255) tttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGcaca < 2:2513587/91‑1 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 2:3727788/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 1:1105241/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 1:3361686/1‑91 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt < 1:2077825/91‑1 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAACGACAGCACAATCGt > 2:3932188/1‑91 (MQ=255) gCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTc < 2:1186280/91‑1 (MQ=255) gCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTc > 1:646465/1‑91 (MQ=255) cATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCa < 2:2482153/91‑1 (MQ=255) tAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatg < 1:2417446‑M2/91‑60 (MQ=255) aCTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCataat < 2:2055350/91‑1 (MQ=255) tataAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGGTTCTTTATACTAAGATGAGCGACAGCAAAATCGTCAtaataa > 2:550731/1‑91 (MQ=255) taAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccacc < 1:3403986‑M2/91‑66 (MQ=255) aaaaaTCTTCAGTAACtaaaaccacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccg < 2:3189886‑M1/91‑76 (MQ=255) aaaaaTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccg < 1:1624526‑M1/91‑76 (MQ=255) aaaaaTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccg < 2:2762399‑M1/91‑76 (MQ=255) aaaaTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccga > 1:1024005‑M1/1‑15 (MQ=255) aaaTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaa > 1:3550867‑M1/1‑14 (MQ=255) aaaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatat < 1:267406/91‑1 (MQ=255) aaTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaat > 2:3075124‑M1/1‑13 (MQ=255) aaTCTTCAGTAACtaaaacaacgttactgaagatttgtatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaat < 2:3908829‑M1/91‑79 (MQ=255) aaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatata > 1:2121567/1‑91 (MQ=255) aTCTTCATTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataa < 2:3517354/91‑1 (MQ=255) aTCTTCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatc < 2:2415449‑M1/91‑80 (MQ=255) aTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTGAGATGAGCGACAGCACAATCGTCATAataaaatataa < 1:3348476/91‑1 (MQ=255) tCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaa > 2:1536563/1‑91 (MQ=255) cTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcct < 2:2585657‑M2/91‑73 (MQ=255) ttCAGTAATGTTGTTCTAGTTACTGTTGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaaat < 2:3427799/91‑1 (MQ=255) tCAGTAACtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcataa > 1:3183171‑M1/1‑8 (MQ=255) tCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaa < 1:163259‑M2/91‑75 (MQ=255) tCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAAtaaaatataaaata < 2:510088/91‑1 (MQ=255) cAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATaaaatataaaatat > 2:2963295/1‑91 (MQ=255) cAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATaaaatataaaatat < 1:79525/91‑1 (MQ=255) cAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATaaaatataaaatat > 1:988277/1‑91 (MQ=255) aGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagc < 2:3590143‑M2/91‑77 (MQ=255) aGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatt < 2:2283721/91‑1 (MQ=255) aCtaaaacaacgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctatt < 2:3136757‑M1/91‑90 (MQ=255) cGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctatta < 2:2444635‑M2/91‑82 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta < 2:2110097/91‑1 (MQ=255) | ATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTA > USA300TCH1516_ALE/987357‑987537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |