| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 987447 | 185 (0.910) | 25 (0.150) | 12/128 | NT | 13.9% | intergenic (+20/+35) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 987456 | 162 (1.000) | intergenic (+29/+26) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein | |||||
Only 100 of 259 total aligned reads displayed.
GTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAGG > USA300TCH1516_ALE/987366‑987546 | gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa < 1:2816357/91‑1 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt < 2:3136757‑M2/91‑3 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt > 2:2047662‑M2/1‑89 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt < 1:1940185‑M2/91‑3 (MQ=255) aGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTCGAAGCATAACTATAAAAATCTTCAGTAACTTTGTTTTAgttac < 1:3952240‑M2/91‑6 (MQ=255) tAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaa > 1:2158883‑M2/1‑82 (MQ=255) aGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaag < 2:2474957‑M2/91‑11 (MQ=255) gATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagat < 2:1302813‑M2/91‑13 (MQ=255) aTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATACAAATCTTCAGTAACGTTGTTTTAgttactgaagatt < 2:3908829‑M2/91‑14 (MQ=255) aTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatt > 2:3075124‑M2/1‑78 (MQ=255) tCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttt > 1:1024005‑M2/1‑76 (MQ=255) tCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttt > 2:2766115‑M2/1‑76 (MQ=255) cGGTGGACATAGCGCAGTATTAGTATTCGATAAGTTTGGAGATGAGCTATAAAATTCTGCAGTAACGTTGTTTTAGTTACTGAAGAtgttt < 2:3484240/91‑1 (MQ=255) cGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagattttt > 2:1985349‑M2/1‑75 (MQ=255) cGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagattttt > 1:1619051‑M2/1‑75 (MQ=255) cGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTGGTTTTAgttactgaagattttt < 2:3189886‑M2/91‑17 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:1898112/1‑91 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt < 1:1068232/91‑1 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:3772978/1‑91 (MQ=255) ggTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGAtttttt > 1:2516095/1‑91 (MQ=255) gTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTc < 1:1767587/91‑1 (MQ=255) gTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTc < 2:397311/91‑1 (MQ=255) tGGACATAACGTAGTATTAGTATTTAAGAGTTTTTAAGCATAACTATAAAATTCTTCAGTAGCGTTGTTTTAGTTACTGAAGATTTTTTCa < 2:1886461/91‑1 (MQ=255) tGGACAGAACGCAGTATTAGTATGCGAGAAATTTGAAGCATATCTATAAAAAGCTTCAGTAGCGTTGTTTTAGTTACTGAAGGTTTTTTCa < 2:2435448/91‑1 (MQ=255) gggACATAACGAAGTATTAGTATTCAAGAAATTTGAAGCATAACGATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCa < 2:1884536/90‑1 (MQ=255) ggACATAACGCAGTATTAGTATTCAAGAAATTTGAAACATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAg < 2:3905996/91‑1 (MQ=255) gACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGt > 1:2108536/1‑91 (MQ=255) cATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGttt < 1:279420/91‑1 (MQ=255) cATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGttt > 2:3262106/1‑91 (MQ=255) aCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCttt > 1:3122510/1‑91 (MQ=255) gCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTtat < 2:3336161/91‑1 (MQ=255) gtattagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACt > 1:465048/1‑91 (MQ=255) tattagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTa > 1:1286304/1‑91 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa > 2:1960481/1‑91 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa < 1:1723442/91‑1 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa > 2:2065567/1‑91 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg < 2:1577187/91‑1 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg < 1:1472244/91‑1 (MQ=255) tagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGa > 1:3626277/1‑91 (MQ=255) agtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGAt > 2:296210/1‑91 (MQ=255) agtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGAt > 1:1049904/1‑91 (MQ=255) gtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATg > 2:1243149/1‑91 (MQ=255) gtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATg < 1:1783587/91‑1 (MQ=255) cAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGa > 2:456382/1‑91 (MQ=255) aaGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGAc > 1:3653837/1‑91 (MQ=255) aGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACa > 1:112858/1‑91 (MQ=255) gAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGTGACAg < 2:659087/91‑1 (MQ=255) aaaTTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGc < 1:2977291/91‑1 (MQ=255) aaTTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGca > 2:1457898/1‑91 (MQ=255) tttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatac < 1:794208‑M2/91‑51 (MQ=255) ttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACaa > 2:2493333/1‑91 (MQ=255) tGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAAt > 2:2561740/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 2:3727788/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc < 1:2417214/91‑1 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 1:3361686/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTATTTATACTAAGATGAGCGACAGCACAAta > 2:360802/1‑90 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt > 1:808075/1‑91 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt < 1:2077825/91‑1 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt < 1:679332/91‑1 (MQ=255) cATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCa < 2:2482142/91‑1 (MQ=255) tAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatg < 1:2417578‑M2/91‑60 (MQ=255) gcTATAAAAATCTTCAGTAACGTTGTTGTAGTTACTGAAGATTTTTTCGGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCagaat < 2:1166323/90‑1 (MQ=255) aCTAGAAAACTCTTCAGTAACGTTGTTTTAGAGACTGAAGATTTTTTCAGTTTCTTTATACTGAGATGAGCGACAGCACAAGCGTCagaat < 2:2601083/91‑1 (MQ=255) tataAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCAtaataa > 2:3864460/1‑91 (MQ=255) tataAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCAtaataa < 2:217847/91‑1 (MQ=255) tataAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGGTTCTTTATACTAAGATGAGCGACAGCAAAATCGTCAtaataa > 2:550731/1‑91 (MQ=255) aaaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatat < 2:2717158/91‑1 (MQ=255) aaaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatat < 2:847826/91‑1 (MQ=255) aaaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatat < 2:1837279/91‑1 (MQ=255) aaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatata > 1:3323677/1‑91 (MQ=255) aTCTTCATTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataa < 2:3517354/91‑1 (MQ=255) aTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTTAGATGAGCGACAGCACAATCGTCATAataaaatataa < 1:3348603/91‑1 (MQ=255) aTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataa > 1:2288827/1‑91 (MQ=255) tCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaa > 2:1536499/1‑91 (MQ=255) tCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaa > 1:3850847/1‑91 (MQ=255) cTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaaa > 1:1540916/1‑91 (MQ=255) ttCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatccta < 1:1010475‑M2/91‑74 (MQ=255) ttCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaaat > 1:3266910/1‑91 (MQ=255) tCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaa < 1:163259‑M2/91‑75 (MQ=255) tCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGTGACAGCACAATCGTCATAAtaaaatataaaata < 2:2711480/91‑1 (MQ=255) tCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAAtaaaatataaaata < 2:510088/91‑1 (MQ=255) cAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATaaaatataaaatat > 1:1365261/1‑91 (MQ=255) gTAACGTTGTTTTAGTTACTGAAGATTTTTTCAATTTCTTTATACTAAGATGAGCGACATCACAATCGTCATAATAAAATATAAAAtattt < 1:3514741/91‑1 (MQ=255) aCGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGTACAATCGTCAGAATAAAATATAAAAtatttatt < 2:241168/91‑1 (MQ=255) cGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctatta < 2:2758510‑M2/91‑82 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta < 2:2429903/91‑1 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta < 2:2110097/91‑1 (MQ=255) gttgttTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctattac < 2:213193‑M2/91‑83 (MQ=255) gttgttTTAGTTACTGAAGATTTTTTCATTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa > 2:1410271/1‑91 (MQ=255) gttgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa < 1:3487854/91‑1 (MQ=255) gttgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa > 1:3746647/1‑91 (MQ=255) ttgttTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctattact < 2:1715569‑M2/91‑84 (MQ=255) ttgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaat > 1:2670441/1‑91 (MQ=255) tgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaata < 1:63809/91‑1 (MQ=255) tgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaata < 2:940433/91‑1 (MQ=255) gttTTAGTTACTGAAGATTTTTTCATTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataa > 2:585655/1‑91 (MQ=255) gttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataa > 2:1536576/1‑91 (MQ=255) tttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataata > 1:879623/1‑91 (MQ=255) tttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataata > 1:3452418/1‑91 (MQ=255) tttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataata > 1:2343792/1‑91 (MQ=255) | GTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAGG > USA300TCH1516_ALE/987366‑987546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |