| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1015009 = | 207 (1.020) | 19 (0.100) | 11/150 | NT | 9.2% | intergenic (+124/+71) | fabI/USA300HOU_RS05015 | Enoyl‑[acyl‑carrier‑protein] reductase [NADPH] FabI/hypothetical protein |
| ? | USA300TCH1516_ALE | 1015047 = | 180 (0.940) | intergenic (+162/+33) | fabI/USA300HOU_RS05015 | Enoyl‑[acyl‑carrier‑protein] reductase [NADPH] FabI/hypothetical protein | |||||
Only 100 of 256 total aligned reads displayed.
GTGAGCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACTGT > USA300TCH1516_ALE/1014921‑1015099 | tttcaaataccgccaacgcattattgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatacgATc < 1:3182733‑M1/3‑1 (MQ=255) tgAGCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCg < 2:649357/91‑1 (MQ=255) gAGCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGc > 1:2571184/1‑91 (MQ=255) tcaaataccgccaacgcattattgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGc > 2:1254107‑M1/87‑91 (MQ=255) gCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCt > 1:3013753/1‑91 (MQ=255) gCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCt > 1:2178634/1‑91 (MQ=255) gCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCt < 1:1457947/91‑1 (MQ=255) aaGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCaa > 1:636370/1‑91 (MQ=255) aaGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCaa > 1:3358293/1‑91 (MQ=255) gCTTTTTTTTTTTTTTTATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCaaaa > 2:2903769/1‑91 (MQ=255) gCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCGCaaaa > 2:3642054/1‑91 (MQ=255) ttttGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGTAC‑AAAAAAATCGCCTCAAAAGCTg > 2:3891032/1‑91 (MQ=255) tttGCTTTTATAATAATCGGACTGATGGAAAATTATTGGATATTTCATTTGACTGATTTTTTATGTAA‑AAAAAAATCGCCTCAAAAGCTGt < 2:1893480/91‑1 (MQ=255) gCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGt < 1:793752/91‑1 (MQ=255) ttttATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGttt > 1:2433103/1‑91 (MQ=255) ttttATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGttt < 1:1629104/91‑1 (MQ=255) tttATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTc < 2:3141796/91‑1 (MQ=255) tgtataAGAATCGGACTGATGGAAAATTATTGGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTc < 2:1975508/89‑1 (MQ=255) ttATAATCATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCa < 2:3510071/91‑1 (MQ=255) ttATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCa < 2:934894/91‑1 (MQ=255) tattgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCATCAAAAGCTGTAGTTTCa > 1:3736123‑M1/68‑91 (MQ=255) tataATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCaa < 1:89682/91‑1 (MQ=255) attgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCaa > 2:1066784‑M1/67‑91 (MQ=255) attgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCaa > 1:1177477‑M1/67‑91 (MQ=255) atggataaggcaaaccgtgatgttaaggactaattctgtggatgtcttttaaggatatgaggtactATCGCCTCAAGAGCTGTAGTTTCaa > 2:3438526‑M1/67‑91 (MQ=255) taataaTCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACt < 2:1549356/91‑1 (MQ=255) taataaTCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACt < 2:226647/91‑1 (MQ=255) tgataaagcaaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCAACt > 1:3769706‑M1/65‑91 (MQ=255) taatCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACtttt < 1:1228236/91‑1 (MQ=255) aatCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTg < 2:2231792/91‑1 (MQ=255) tCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGAt > 2:3962267/1‑91 (MQ=255) cGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATg < 1:1696011/91‑1 (MQ=255) cGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATg < 1:2520255/91‑1 (MQ=255) ggACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGc > 1:488323/1‑91 (MQ=255) caaacagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGc > 1:362553‑M1/57‑91 (MQ=255) caaacaggaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGc > 1:1962848‑M1/57‑91 (MQ=255) aCTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGa < 1:135150/91‑1 (MQ=255) aCTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGa < 1:86182/91‑1 (MQ=255) aCTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGa > 2:358071/1‑91 (MQ=255) acagtaatgttaaggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGAt > 1:13900‑M1/54‑91 (MQ=255) tGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTa < 1:2061279/91‑1 (MQ=255) tGGAAAATTATTTGATATTTCATTTGACTGATTTTTTAAGAAA‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTa < 2:2146117/91‑1 (MQ=255) gAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATc < 1:1003176/91‑1 (MQ=255) gAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATc < 1:461207/91‑1 (MQ=255) aaTTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTta < 1:2480726/91‑1 (MQ=255) attattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTtat < 2:1786670/91‑1 (MQ=255) ttattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTtata < 2:3799694/91‑1 (MQ=255) ttattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTtata < 1:2103836/91‑1 (MQ=255) tattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTatat > 1:231139/1‑91 (MQ=255) tattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTatat > 2:1721840/1‑91 (MQ=255) tattTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTCTCAACTTTTGATGCGATAGTATCTTatat > 1:3177110/1‑91 (MQ=255) attTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGCTAGTATCTTATAtt > 2:245797/1‑91 (MQ=255) attTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATAtt > 2:82861/1‑91 (MQ=255) attTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATAtt > 2:82650/1‑91 (MQ=255) attTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATAtt > 1:3398483/1‑91 (MQ=255) attTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATAtt > 1:235423/1‑91 (MQ=255) aggactaattctgtggatgtcttttaagaatataagatactATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTatat > 1:1040350‑M1/42‑91 (MQ=255) ttGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCt > 1:3889156/1‑91 (MQ=255) ttGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCt < 1:450720/91‑1 (MQ=255) tGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCtt > 2:2935010/1‑91 (MQ=255) tGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCtt > 1:985945/1‑91 (MQ=255) atatTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTaa < 1:718881/91‑1 (MQ=255) tatTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTaaa > 1:3784871/1‑91 (MQ=255) tatTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTaaa < 1:15774/91‑1 (MQ=255) atTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTaaaa > 1:70280/1‑91 (MQ=255) atTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTaaaa > 1:1921965/1‑91 (MQ=255) tttCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAg > 2:3227598/1‑91 (MQ=255) tCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGAc > 2:2577355/1‑91 (MQ=255) aTTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACAt < 1:3874524/91‑1 (MQ=255) aTTTGACTGATTTATTATGCAC‑ACAAAAATAGCCTCACAAGATGTCGTTTCAACTTTTGATGCGAAGGTATCTTATATTCTTAAAAGACAt > 2:1173422/1‑91 (MQ=255) tttGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATc > 2:2806400/1‑91 (MQ=255) ttGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATcc < 2:1282557/91‑1 (MQ=255) aCTGATTTTTTATGCACAAAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCcac > 1:3272880/1‑91 (MQ=255) aCTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCcaca > 2:1074034/1‑91 (MQ=255) aCTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCcaca < 2:3079125/91‑1 (MQ=255) cTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAg > 1:1591667/1‑91 (MQ=255) cTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTGTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAg < 2:602140/91‑1 (MQ=255) tGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGa < 2:202772/91‑1 (MQ=255) ttttttGTGCAT‑‑AAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAACGACATCCACAGAATTa > 2:3784241/1‑91 (MQ=255) ttttttATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAAtt < 2:2680851/91‑1 (MQ=255) ttATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTc > 1:2319621/1‑91 (MQ=255) aTGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCt < 1:1656157/91‑1 (MQ=255) aTGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCt > 1:1764356/1‑91 (MQ=255) aTGCAC‑AAAAAAAGATCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCt < 1:3565831/91‑1 (MQ=255) tGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCtt > 2:1430900/1‑91 (MQ=255) gCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTa > 1:2794868/1‑91 (MQ=255) gCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTa > 1:2794005/1‑91 (MQ=255) gCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTa > 1:88474/1‑91 (MQ=255) cac‑aAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTaa < 2:499225/91‑1 (MQ=255) ac‑aAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAAc < 2:805626/91‑1 (MQ=255) c‑aAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACa > 1:2908223/1‑91 (MQ=255) aaaaaaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACAt < 1:817329/91‑1 (MQ=255) aaaaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTa < 2:1812390/91‑1 (MQ=255) aaaaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTa < 1:3574761/91‑1 (MQ=255) aaaaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTa < 2:783980/91‑1 (MQ=255) aaaaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTa < 2:2077926/91‑1 (MQ=255) aaaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACt < 1:630626/91‑1 (MQ=255) aaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACTg < 1:3850505/91‑1 (MQ=255) aaTCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACTg < 1:529623/91‑1 (MQ=255) ATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACTGt > 2:2998743‑M1/1‑91 (MQ=255) | GTGAGCAAAGCTTTTTTGCTTTTATAATAATCGGACTGATGGAAAATTATTTGATATTTCATTTGACTGATTTTTTATGCAC‑AAAAAAATCGCCTCAAAAGCTGTAGTTTCAACTTTTGATGCGATAGTATCTTATATTCTTAAAAGACATCCACAGAATTAGTCCTTAACATTACTGT > USA300TCH1516_ALE/1014921‑1015099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |