| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1044649 = | 217 (1.070) | 23 (0.140) | 12/132 | NT | 12.1% | coding (958/960 nt) | yfmC_1 | Fe(3+)‑citrate‑binding protein YfmC |
| ? | USA300TCH1516_ALE | 1044700 = | 156 (0.930) | coding (114/117 nt) | USA300HOU_RS05165 | hypothetical protein | |||||
Only 100 of 323 total aligned reads displayed.
TTGACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAA > USA300TCH1516_ALE/1044560‑1044739 | ttaaaacaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTa < 1:541065‑M1/2‑1 (MQ=255)ttGACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCaaaata < 2:1476206/91‑1 (MQ=255)ttGACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCaaaata < 1:2724916/91‑1 (MQ=255)ttGACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGAAAAGAAGAAGAAATAGAAAAAATTGCAAAAAAAGAaaaata < 2:960652/91‑1 (MQ=255) taaaacaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTaa < 1:1769479‑M1/3‑1 (MQ=255) gACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCaaaataaa < 1:2637933/91‑1 (MQ=255) aCCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCaaaataaaa < 1:1584181/91‑1 (MQ=255) aacaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTaaaaa > 1:167913‑M1/86‑91 (MQ=255) cGAAATAAGTGCTTGAAATCAAGAGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTTGAAAAAATTGCAGAAAAAGCaaaataaaaat < 2:3022371/91‑1 (MQ=255) acaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAAt > 2:1292033‑M1/85‑91 (MQ=255) acaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAAt > 2:2439488‑M1/85‑91 (MQ=255) acaatccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAAt > 2:371742‑M1/85‑91 (MQ=255) atccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACa < 1:2896367‑M1/10‑1 (MQ=255) atccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACa < 2:1314802‑M1/10‑1 (MQ=255) tccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAg < 2:1406379‑M1/11‑1 (MQ=255) tccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAg < 2:1995505‑M1/11‑1 (MQ=255) tccttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAg > 2:2347042‑M1/81‑91 (MQ=255) aTAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAg < 2:2151736/91‑1 (MQ=255) ttgtcggttatgtaattaaatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAgcgc < 2:1348386‑M1/14‑1 (MQ=255) aGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAgcgc < 1:849715/91‑1 (MQ=255) aGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAgcgc < 2:518296/91‑1 (MQ=255) tGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTa > 2:3304397/1‑91 (MQ=255) tGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTa < 2:1044607/91‑1 (MQ=255) ggTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTAc < 1:1890237/91‑1 (MQ=255) ttGAAATCAAGGGGGATTAACGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAAATACAGAAAAAGCAAAATAAAAATACAGCGCTACTc < 2:1397733/91‑1 (MQ=255) tGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCg < 1:2821372/91‑1 (MQ=255) aTCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTaaa < 1:327034/91‑1 (MQ=255) tCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAAt > 1:1462676/1‑91 (MQ=255) aaGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCa > 1:2092760/1‑91 (MQ=255) aaGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCa > 1:2158630/1‑91 (MQ=255) ggggATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCatat > 2:3872981/1‑91 (MQ=255) aatttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATaa > 1:868274‑M1/60‑91 (MQ=255) gATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAag < 1:3704480/91‑1 (MQ=255) tttattcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATAaga > 1:952561‑M1/58‑91 (MQ=255) aTTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAaga > 1:3882891/1‑91 (MQ=255) ttATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAagag < 1:300704/91‑1 (MQ=255) tgtCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGt < 2:3614456/89‑1 (MQ=255) tATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGt < 1:2602406/91‑1 (MQ=255) aTCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTg < 2:335253/91‑1 (MQ=255) tcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc > 1:3275686‑M1/53‑91 (MQ=255) tcgaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc > 1:3048608‑M1/53‑91 (MQ=255) cGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgc < 1:2559466/91‑1 (MQ=255) gCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcg < 1:1098319/91‑1 (MQ=255) gaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcgc > 1:496890‑M1/51‑91 (MQ=255) gaaataaactttcaggtaaatcatcacatccgacagataataaacataatTAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcgc > 1:173083‑M1/51‑91 (MQ=255) cAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGgcgc < 2:1780172/91‑1 (MQ=255) agcgAAAGGATGGCAGAAGATTAAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCCACTCTTATATGATTTACGAGTAGCGCTg < 2:3957008/88‑1 (MQ=9) aGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTg < 2:22979/91‑1 (MQ=255) tGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTa < 1:2246169/91‑1 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtctt > 2:1651127/1‑91 (MQ=255) aGTATGGCAGAAGATTTAGAAAAAATTGAAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTAtttt < 2:2614607/91‑1 (MQ=255) tATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTa < 2:2833090/91‑1 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGGAAAAGCAAAATAAAAATATAGCGCTGCTCATAAATCATATAAGAGTGGCGCTGTATTTGTAATTAt < 2:3674018/91‑1 (MQ=255) cAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATAGAAGAGTGGCGATGTATTTTTAATTAt > 2:3419288/1‑91 (MQ=255) agaagaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 1:3191628/91‑1 (MQ=255) agaagaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 2:724498/91‑1 (MQ=255) agaagaTTGAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATg < 2:586619/91‑1 (MQ=255) gaagaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGt < 1:2287469/91‑1 (MQ=255) aagaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGtt < 2:1578681/91‑1 (MQ=255) agaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGttt > 1:3838523/1‑91 (MQ=255) gaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTtta < 2:3080006/91‑1 (MQ=255) gaTTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTtta < 2:2685232/91‑1 (MQ=255) ttAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTGAATTATGAttatta > 2:2739191/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAACAATACAGCGCTACTCGTAAATCATAGAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:1039489/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 1:1054097/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:2071274/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:2771755/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:1438601/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat < 1:734823/91‑1 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTtattat > 2:2039221/1‑91 (MQ=255) tAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGCTtattat > 2:3515586/1‑91 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt < 2:1923152/91‑1 (MQ=255) gAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCt > 1:3077275/1‑91 (MQ=255) aaaaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTg > 1:1620039/1‑91 (MQ=255) aaaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGt < 1:698286/91‑1 (MQ=255) aaaaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTc > 1:2372211/1‑91 (MQ=255) aaTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCgg < 1:3326578/91‑1 (MQ=255) aTTGCAGAAAAAGCAAAATAAAAATACATCGTTACTCTTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGa < 2:1099159/91‑1 (MQ=255) aTTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGa < 1:1011184/91‑1 (MQ=255) ttGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAt > 1:2454669/1‑91 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg > 2:3799890/1‑91 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg > 1:2074797/1‑91 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg > 1:413590/1‑91 (MQ=255) tGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtg > 2:1206370/1‑91 (MQ=255) gCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgt < 1:1723671/91‑1 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg > 1:3605622/1‑91 (MQ=255) cAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGAtgtg < 2:1741617/91‑1 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga < 1:2937630/91‑1 (MQ=255) aGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGtga > 2:3528458/1‑91 (MQ=255) aaGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAtt > 1:3402183/1‑91 (MQ=255) aGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGAttt < 2:957669/91‑1 (MQ=255) gCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTa < 2:3245630/91‑1 (MQ=255) cAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAc < 2:3176677/91‑1 (MQ=255) aaaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTAcc > 1:122474/1‑91 (MQ=255) aaataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCt > 2:857799/1‑91 (MQ=255) aataaaaataCAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTg < 2:666786/91‑1 (MQ=255) TAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa > 1:2324571‑M1/1‑91 (MQ=255) TAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa > 2:868162‑M1/1‑91 (MQ=255) TAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa < 2:2081869‑M1/91‑1 (MQ=255) TAAAAATACAGCGCTACACGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGaa > 2:2924129‑M1/1‑91 (MQ=255) | TTGACCGAAATAAGTGGTTGAAATCAAGGGGGATTATCGCAAGTGAAAGTATGGCAGAAGATTTAGAAAAAATTGCAGAAAAAGCAAAATAAAAATACAGCGCTACTCGTAAATCATATAAGAGTGGCGCTGTATTTTTAATTATGTTTATTATCTGTCGGATGTGATGATTTACCTGAA > USA300TCH1516_ALE/1044560‑1044739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |