| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1072018 = | 176 (0.860) | 12 (0.080) | 5/126 | NT | 8.9% | intergenic (‑490/+315) | USA300HOU_RS05290/folD | Pesticidal crystal protein Cry22Aa/Bifunctional protein FolD protein |
| ? | USA300TCH1516_ALE | 1072073 = | 108 (0.680) | intergenic (‑545/+260) | USA300HOU_RS05290/folD | Pesticidal crystal protein Cry22Aa/Bifunctional protein FolD protein | |||||
Only 100 of 247 total aligned reads displayed.
GGCCCTGACTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCAT > USA300TCH1516_ALE/1071928‑1072108 | ggCCCTGACTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGa < 1:217374/91‑1 (MQ=255) tgagttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcaaa < 2:2401274‑M1/3‑1 (MQ=255) tgagttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcaaa > 1:1353931‑M1/89‑91 (MQ=255) tgagttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcaaa < 1:2531887‑M1/3‑1 (MQ=255) gagttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAAt < 2:1696077‑M1/4‑1 (MQ=255) cTGACTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTTCTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATg < 1:1952655/91‑1 (MQ=255) cTGACTACAATTGTAGACTTGTTACTAGGTTATTTGCATACAAATAACCATGGTCTATATAAAATTGTTTAGCCAAGTACAAAGTTGAATg < 2:3246928/91‑1 (MQ=255) agttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATg > 1:1456770‑M1/87‑91 (MQ=255) ttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCt > 1:2917774‑M1/85‑91 (MQ=255) ttttaataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCt < 1:3742670‑M1/7‑1 (MQ=255) gACTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCt < 2:3333149/91‑1 (MQ=255) tttaataaagtcttttaacccacagtaaatattattttgcaattgcaatggataacaagaaaaatctgggacattaatcgatcAAATGCTc > 2:3670223‑M1/84‑91 (MQ=255) aCTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTc < 1:1262010/91‑1 (MQ=255) aCTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTc > 2:1910412/1‑91 (MQ=255) ttaataaagtcttttaacccacattaaatattattttgcaattgcaataaaaaaaaaaaaaaatctgggacattaatcgatcAAATGCTcc > 2:1858367‑M1/83‑91 (MQ=255) tAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTccc < 1:578799/91‑1 (MQ=255) aataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCt > 1:1307300‑M1/81‑91 (MQ=255) aGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCt > 1:2684873/1‑91 (MQ=255) gAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCtt < 1:1645857/91‑1 (MQ=255) gAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCtt > 2:2920913/1‑91 (MQ=255) gAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCtt > 1:2983292/1‑91 (MQ=255) ataaagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCtt > 2:3484015‑M1/80‑91 (MQ=255) aTTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCa < 1:2020509/91‑1 (MQ=255) aTTGAAAACTTGTCACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCa < 1:3961774/91‑1 (MQ=255) ttGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCaa > 2:3122892/1‑91 (MQ=255) aagtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTGCaa < 1:3565333‑M1/15‑1 (MQ=255) tGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCaaa < 1:893196/91‑1 (MQ=255) agtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCaaa > 2:909082‑M1/76‑91 (MQ=255) gtcttttaacccacattaaatattattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCAAAg > 1:3601812‑M1/75‑91 (MQ=255) gAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAg < 2:677351/91‑1 (MQ=255) gAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAg > 2:1739944/1‑91 (MQ=255) aaCTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCt < 1:2058013/91‑1 (MQ=255) aCTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGTTCCCTTCAAAGCCtt < 1:3365038/91‑1 (MQ=255) cTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTc < 2:2283566/91‑1 (MQ=255) cTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATGGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTc < 2:1974417/91‑1 (MQ=255) tGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCAt < 2:2747760/91‑1 (MQ=255) ttACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCAttt > 1:37743/1‑91 (MQ=255) cAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTAtt < 1:949270/91‑1 (MQ=255) aaGCTTATTTTCGTTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAAGGCTCCCTTCAAAGCCTTCATTTATTc < 2:3281627/91‑1 (MQ=255) tATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGt > 1:1800136/1‑91 (MQ=255) aTTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTc < 2:2360132/91‑1 (MQ=255) aTTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTc < 2:1485846/91‑1 (MQ=255) aTTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTc < 1:501150/91‑1 (MQ=255) ttttCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCt < 1:469462/91‑1 (MQ=255) ttttCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCt > 2:1403855/1‑91 (MQ=255) attatcgtgcaattgcaatgaatagcaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTa > 2:3679685‑M1/54‑91 (MQ=255) ttattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTAc > 1:2980620‑M1/53‑91 (MQ=255) tcattcaATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACt < 1:744000/91‑1 (MQ=255) tattttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACt > 2:3037099‑M1/52‑91 (MQ=255) attttgcaattgcaatgaataacaagaaaaatctgggacattaatcgatcAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACtt > 1:3249271‑M1/51‑91 (MQ=255) attcaATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACttt > 2:2867550/1‑91 (MQ=255) caATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGaa < 1:355474/91‑1 (MQ=255) caATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGaa < 1:3466884/91‑1 (MQ=255) caATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGaa < 2:754314/91‑1 (MQ=255) aTTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAgg > 1:611527/1‑91 (MQ=255) aTTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAgg > 2:2714355/1‑91 (MQ=255) aTTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAgg > 1:2851607/1‑91 (MQ=255) ttAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAggg < 2:2643196/91‑1 (MQ=255) tAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGa < 1:2496046/91‑1 (MQ=255) tAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGa < 1:3208504/91‑1 (MQ=255) actactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGc > 2:1016539/1‑91 (MQ=255) actactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGc > 2:3222796/1‑91 (MQ=255) actactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGc > 2:2575434/1‑91 (MQ=255) ctactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCa > 2:3896688/1‑91 (MQ=255) ctactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCa < 1:817102/91‑1 (MQ=255) ctactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCa > 2:572563/1‑91 (MQ=255) tactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCAt > 2:623139/1‑91 (MQ=255) tactGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGCCTACACTGAAGGGAGCAt > 2:1279626/1‑91 (MQ=255) ctGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCAttt > 1:3303678/1‑91 (MQ=255) tGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTg > 1:2604826/1‑91 (MQ=255) gTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGa < 2:121636/91‑1 (MQ=255) tatataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCg > 1:1179915/1‑91 (MQ=255) tatataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCg > 2:3949092/1‑91 (MQ=255) atataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGa < 2:3822319/91‑1 (MQ=255) atataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGa > 1:1369541/1‑91 (MQ=255) tataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGAt < 1:2698900/91‑1 (MQ=255) tataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGAt > 1:1893346/1‑91 (MQ=255) ataAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGAtt < 1:3865835/91‑1 (MQ=255) aaaaTTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTaa < 1:3616754/91‑1 (MQ=255) aaTTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATg > 2:3090586/1‑91 (MQ=255) ttgttgAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTc < 2:2983292/91‑1 (MQ=255) gttgAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTccc > 1:2894792/1‑91 (MQ=255) gttgAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTccc > 1:1781963/1‑91 (MQ=255) gttgAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTccc > 2:721380/1‑91 (MQ=255) gAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGa > 1:116679/1‑91 (MQ=255) aGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGAt < 1:1524558/91‑1 (MQ=255) aGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGAt < 1:1678132/91‑1 (MQ=255) aGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGAt > 2:502925/1‑91 (MQ=255) ccAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGAttt < 1:1961749/91‑1 (MQ=255) cAAGTACAACGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGAtttt < 1:1052754/91‑1 (MQ=255) gTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCt > 1:1423508/1‑91 (MQ=255) gTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGAATTTGATCGATTAATGTCCCAGATTTTTCt > 2:369141/1‑91 (MQ=255) tACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCtt > 1:2267288/1‑91 (MQ=255) aaGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTa > 1:1547684/1‑91 (MQ=255) aaGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTa > 2:216295/1‑91 (MQ=255) aGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTAt < 1:2386897/91‑1 (MQ=255) gTGAAATGCTCCCTTCAAAGCCGTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTAtt < 2:3189645/91‑1 (MQ=255) tGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTc < 1:3009540/91‑1 (MQ=255) gAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCa > 2:374536/1‑91 (MQ=255) AAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCat < 2:819572‑M1/91‑1 (MQ=255) | GGCCCTGACTAGAATTGAAAACTTGTTACAAGCTTATTTTCATTCAATTAACTACTGTCTATATAAAATTGTTGAGCCAAGTACAAAGTGAAATGCTCCCTTCAAAGCCTTCATTTATTCAATGTCTACTTTGAAGGGAGCATTTGATCGATTAATGTCCCAGATTTTTCTTGTTATTCAT > USA300TCH1516_ALE/1071928‑1072108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |