| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1119593 = | 186 (0.910) | 16 (0.090) | 6/136 | NT | 10.1% | intergenic (+12/+297) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein |
| ? | USA300TCH1516_ALE | 1119635 = | 126 (0.730) | intergenic (+54/+255) | typA/USA300HOU_RS05545 | GTP‑binding protein TypA/BipA/hypothetical protein | |||||
Only 100 of 245 total aligned reads displayed.
AAGAAAGAAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTAC > USA300TCH1516_ALE/1119503‑1119682 | ttaatatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgcca < 2:863983‑M1/1‑1 (MQ=255)aagaaagaAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACataata > 1:1946360/1‑91 (MQ=255)aagaaagaAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACataata > 1:857688/1‑91 (MQ=255)aagaaagaAAATTTTAAACAAAAAAGTAAGTAAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACataata < 2:2328643/91‑1 (MQ=255) agaaagaaAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACAtaataa > 2:1940556/1‑91 (MQ=255) aatatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaa < 2:949068‑M1/3‑1 (MQ=255) atatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaaa < 2:874863‑M1/4‑1 (MQ=255) atatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccaaaa < 1:3717572‑M1/4‑1 (MQ=255) tatctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAag > 1:456598‑M1/87‑91 (MQ=255) aagaaaATGTTAAACAGAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAag < 2:3777234/91‑1 (MQ=255) atctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcttttattatatgccAAAaga < 2:1595876‑M1/6‑1 (MQ=255) atctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAaga < 2:1857520‑M1/6‑1 (MQ=255) agaaaATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAaga > 2:1570888/1‑91 (MQ=255) tctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAagag > 1:3116750‑M1/85‑91 (MQ=255) tctgaataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAagag > 1:2463160‑M1/85‑91 (MQ=255) aaaTTTTTAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa > 2:950136/1‑91 (MQ=255) aaaTTTTTAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa > 2:530113/1‑91 (MQ=255) aaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGaa > 1:541424/1‑91 (MQ=255) aaaTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAAAAATTTAACATAATAAAAGAGaa > 2:1776518/1‑91 (MQ=255) aTTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGGGAAGc > 2:3638867/1‑91 (MQ=255) ttttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCt > 1:1187918/1‑91 (MQ=255) ttttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCt > 1:3452349/1‑91 (MQ=255) ataaacaagttagaaatttgaaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCt < 2:153824‑M1/12‑1 (MQ=255) tttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTg > 1:2116961/1‑91 (MQ=255) tttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTg > 1:1761751/1‑91 (MQ=255) ttAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGa > 1:1572116/1‑91 (MQ=255) tAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCtaag < 1:3019359/91‑4 (MQ=255) tAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAg > 1:795109/1‑91 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACACATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg > 2:2530921/1‑91 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATCATTTAACATAATAAAAGAGAAGCTGAGCg > 1:3172338/1‑91 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg > 1:3932313/1‑91 (MQ=255) aaCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCg > 2:2582124/1‑91 (MQ=255) aCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAGTAAAAGAGAAGCTGAGCGa < 2:3455222/91‑1 (MQ=255) aCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGa < 2:1141535/91‑1 (MQ=255) aCAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGa > 2:2192394/1‑91 (MQ=255) cAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGAt > 2:183764/1‑91 (MQ=255) cAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGAt > 1:1020754/1‑91 (MQ=255) cAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGAt < 2:1524521/91‑1 (MQ=255) aaaaTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGa < 1:736688/91‑1 (MQ=255) aTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAg < 1:3640400/91‑1 (MQ=255) aTGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGACGAAAg > 2:3208257/1‑91 (MQ=255) ttCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGAGATGAAAGTTg > 2:3958659/1‑91 (MQ=255) tCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGc < 2:371068/91‑1 (MQ=255) cGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGCGCGATGAAAGTTGCt > 1:1306422/1‑91 (MQ=255) aagaaaatgtgaaagtagcaggaaataatagcattgacacactgttttaactattatatgccAAAAGAGAAGCTGAGCGATGAAAGTGGCt > 2:2645202‑M1/63‑91 (MQ=255) tGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTa > 2:119120/1‑91 (MQ=255) gAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAg < 2:3031500/91‑1 (MQ=255) aaaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAg > 1:2945172‑M1/60‑91 (MQ=255) aaatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc > 2:888170‑M1/59‑91 (MQ=255) aaaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc < 1:1819506/91‑1 (MQ=255) aaaaaGAAGCAAAGCGTATCAAACAAATCATGCAAGATAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGc < 2:2937857/91‑1 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:2049353‑M1/58‑91 (MQ=255) aatgtgaaagtaacaggaaataatagcatttaaacactttttcaaatattatatgccAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt > 1:2456755‑M1/58‑91 (MQ=255) aaaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCt < 1:1819149/91‑1 (MQ=255) aaaaGAAGCAAAGCGTATCAAACAAAGGAGGCAAGAAAACGAATAATTGAACGTAATAAAAGAGAAGCTGGGCGATGAAAGTTGCGTAGCt < 2:3167662/91‑1 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCtt < 2:2610901/91‑1 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCtt < 1:2506050/91‑1 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCtt < 1:2860412/91‑1 (MQ=255) aaaGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCtt < 1:2353340/91‑1 (MQ=255) agCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtt > 1:276835/1‑91 (MQ=255) gCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCttt > 1:903106/1‑91 (MQ=255) cAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtttt > 1:652755/1‑91 (MQ=255) cAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCtttt > 2:3557598/1‑91 (MQ=255) aaaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTg < 1:1449889/91‑1 (MQ=255) aaGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTgg > 2:683116/1‑91 (MQ=255) gCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCa < 2:126546/91‑1 (MQ=255) gCGTATCAAACAAAGGATGGAAGAAGACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTGCTCTTTTGGCa < 2:560677/91‑1 (MQ=255) cGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCat > 2:2848637/1‑91 (MQ=255) tCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataa < 2:1719480/91‑1 (MQ=255) tCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataa > 2:1407511/1‑91 (MQ=255) tCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataa > 1:881128/1‑91 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 2:3227865/91‑1 (MQ=255) aaacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATataata < 2:3857790/91‑1 (MQ=255) aacaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTGTTGGCATATAatat > 2:3317220/1‑91 (MQ=255) acaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATAtt < 2:2756837/91‑1 (MQ=255) acaaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATAtt > 1:832209/1‑91 (MQ=255) aaaTGATGCAAGAAAACGAATAATTTAACATAATAAACGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTg > 1:3329604/1‑91 (MQ=255) aaaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTg > 1:3901588/1‑91 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa < 1:3203478/91‑1 (MQ=255) aaTGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGa < 2:776750/91‑1 (MQ=255) atgatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaa < 1:2703568/91‑1 (MQ=255) tgatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaa > 1:2743179/1‑91 (MQ=255) tgatgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaa > 1:1144362/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:689101/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa < 1:3061646/91‑1 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 1:1219649/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 1:2268087/1‑91 (MQ=255) atgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGaaaaa > 2:50586/1‑91 (MQ=255) tgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAg > 2:3737862/1‑91 (MQ=255) tgCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAg > 2:2901925/1‑91 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGc < 2:2244692/91‑1 (MQ=255) gAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGc > 2:2011505/1‑91 (MQ=255) aataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCt < 2:1994418/91‑1 (MQ=255) aataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCt > 2:3116365/1‑91 (MQ=255) ataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCta < 2:865520/91‑1 (MQ=255) ataatTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCta > 2:2423511/1‑91 (MQ=255) tttAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCtattat < 1:1388290/91‑1 (MQ=255) aCATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTcc > 1:2565113/1‑91 (MQ=255) ataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTa > 1:351500/1‑91 (MQ=255) ataaAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTa > 1:2875291/1‑91 (MQ=255) | AAGAAAGAAAATTTTAAACAAAAATGTTCGTGAAAAAGAAGCAAAGCGTATCAAACAAATGATGCAAGAAAACGAATAATTTAACATAATAAAAGAGAAGCTGAGCGATGAAAGTTGCTTAGCTTCTCTTTTGGCATATAATATTTGAAAAAGTGTTTAAATGCTATTATTTCCTGTTAC > USA300TCH1516_ALE/1119503‑1119682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |