| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1608653 | 150 (0.740) | 7 (0.040) | 5/142 | NT | 5.0% | coding (224/930 nt) | USA300HOU_RS07970 | hypothetical protein |
| ? | USA300TCH1516_ALE | = 1608670 | NA (NA) | coding (207/930 nt) | USA300HOU_RS07970 | hypothetical protein | |||||
Only 100 of 209 total aligned reads displayed.
CCTACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCAT > USA300TCH1516_ALE/1608602‑1608759 | ccTACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCg < 1:3352769/91‑1 (MQ=31)ccTACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCg < 1:99537/91‑1 (MQ=31)ccTACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCg > 2:559640/1‑91 (MQ=31) tACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCa > 2:3731616/1‑91 (MQ=33) tACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCa > 2:3731745/1‑91 (MQ=33) acaacaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCaa > 1:2258467/1‑91 (MQ=34) acaacaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCaa > 1:211428/1‑91 (MQ=34) caacaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCACATTCTTTACGATGCTTCCTCGCaaa > 2:2033768/1‑91 (MQ=16) caacaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCaaa > 1:3951673/1‑91 (MQ=34) aacaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAAt > 1:1300162/1‑91 (MQ=33) acaTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAAtt > 1:2345766/1‑91 (MQ=33) caTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTc < 1:1941212/91‑1 (MQ=34) caTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTc > 2:1214767/1‑91 (MQ=34) caTTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTc < 1:1812577/91‑1 (MQ=34) tttGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCaa > 1:3107279/1‑91 (MQ=34) tGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATc < 1:799142/91‑1 (MQ=34) gTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCg < 1:1562688/91‑1 (MQ=34) gTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCg > 1:2922025/1‑91 (MQ=34) gTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCg < 2:119737/91‑1 (MQ=34) tAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGc < 1:2009809/91‑1 (MQ=34) tAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGc > 2:2422487/1‑91 (MQ=33) aGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAGTTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAACTTCAATCGcc > 1:2871291/1‑90 (MQ=255) aGCTTTAACTTTTAGTCCAAAGTTATATTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCa < 2:3421943/91‑1 (MQ=21) gCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAt > 1:3321648/1‑91 (MQ=33) gCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAt > 1:3322019/1‑91 (MQ=34) gCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAt < 1:615828/91‑1 (MQ=34) cTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAtt > 1:424307/1‑91 (MQ=35) tAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAttttt < 1:3826246/91‑1 (MQ=39) aaCTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCAtttttt > 2:1168449/1‑91 (MQ=39) cgtttAGTCCAAAGTTATCTTTGAAGGATTGTTCACCTACTTTTTCAAATGCTTTACGATGCTTCTTCGCAAACTCAATCGCAttttttgc < 2:3706466/89‑3 (MQ=11) cTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTc < 1:703490/91‑1 (MQ=39) ttttAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCt < 1:1144423/91‑1 (MQ=39) ttttAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCt < 1:715858/91‑1 (MQ=39) ttAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGc > 2:1927502/1‑91 (MQ=37) ttAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGc > 2:798143/1‑91 (MQ=38) tAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCa > 2:1543731/1‑91 (MQ=38) tAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCa > 1:430075/1‑91 (MQ=39) gTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAgg < 2:3835992/91‑1 (MQ=39) gTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAgg < 1:1664697/91‑1 (MQ=38) gTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAgg > 1:1045207/1‑91 (MQ=39) ccAGAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCg < 1:3558341/91‑1 (MQ=255) ccAAAGTTATCTTTCAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGCTGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGTCg > 2:3365333/1‑91 (MQ=255) ccAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCg > 2:1675879/1‑91 (MQ=39) ccAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCg < 1:2707772/91‑1 (MQ=255) ccAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCg > 1:952136/1‑91 (MQ=255) cAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGTTGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCgg > 1:1407896/1‑91 (MQ=255) cAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCgg > 1:1067486/1‑91 (MQ=255) aaGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGtt > 1:84273/1‑91 (MQ=255) aaGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGtt > 2:2304894/1‑91 (MQ=255) aGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTg < 1:1909268/91‑1 (MQ=255) aGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTg < 2:1122683/91‑1 (MQ=255) gTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGa < 2:1338930/91‑1 (MQ=255) ttATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGaa < 1:1877004/91‑1 (MQ=255) ttATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGaa < 1:3539503/91‑1 (MQ=255) tATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGaaa < 2:1847381/91‑1 (MQ=255) aTCTTTAAAGAATTGTTCACCTACTTTTTTATTTTTTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAg > 2:2613919/1‑91 (MQ=14) aTCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAg < 2:2863978/91‑1 (MQ=255) aTCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAg < 2:1700497/91‑1 (MQ=255) aTCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAg < 2:2373968/91‑1 (MQ=255) aTCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAg > 2:2756113/1‑91 (MQ=255) tCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGc < 1:385788/91‑1 (MQ=255) tCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGc > 1:3242473/1‑91 (MQ=255) tCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGc < 2:1681083/91‑1 (MQ=255) cTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGcc < 2:2942236/91‑1 (MQ=255) cTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGcc > 2:1068888/1‑91 (MQ=255) cTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGcc > 2:646468/1‑91 (MQ=255) tttAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCt < 2:110418/91‑1 (MQ=255) ttAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCtt < 2:904920/91‑1 (MQ=255) tAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCCATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTg > 2:3561192/1‑91 (MQ=255) aaaGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTgg < 2:2960513/91‑1 (MQ=255) aGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGcc < 2:3082879/91‑1 (MQ=255) aTTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTAc < 2:1335042/91‑1 (MQ=255) ttGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCTGTTGAAAGCCTTGGCCTACa > 2:2199058/1‑91 (MQ=255) ttGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACa > 1:3537896/1‑91 (MQ=255) ttGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACa > 1:283213/1‑91 (MQ=255) tGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACat < 1:688745/91‑1 (MQ=255) gTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACata > 1:159011/1‑91 (MQ=255) gTTCACCTACTTTTTCAAATCCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGCTGTACGCCTTGGCCTTCata > 2:344946/1‑91 (MQ=14) ttCACCTACTTTTTTTATTTTTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCGTACatat > 2:3514191/1‑91 (MQ=17) ttCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACatat > 2:3316817/1‑91 (MQ=255) ttCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCATACatat > 2:3514338/1‑91 (MQ=255) cACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCTGGCGCTTGAAAGCCTTGGCCTACGTCttt > 2:3636047/1‑91 (MQ=17) cACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATAttt < 1:24914/91‑1 (MQ=255) aCCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATAtttt > 2:2447635/1‑91 (MQ=255) aCCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATAtttt > 2:1722581/1‑91 (MQ=255) cTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGc < 1:2158495/91‑1 (MQ=255) cTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGc > 1:3499702/1‑91 (MQ=255) tttttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCt > 1:276669/1‑91 (MQ=255) tttttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCt > 1:294409/1‑91 (MQ=255) ttttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCtt > 1:2511234/1‑91 (MQ=255) ttttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCtt < 1:2415888/91‑1 (MQ=255) ttttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCtt > 1:3454025/1‑91 (MQ=255) ttttCAAATTCTTTACGATGCTTCTTCGCAAATTAAATCGCATTTTTTCCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCtt > 2:3328218/1‑91 (MQ=255) tttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTc < 1:2648626/91‑1 (MQ=255) ttCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTcc < 1:436029/91‑1 (MQ=255) ttCAAAGTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTcc < 2:852625/91‑1 (MQ=255) tCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCa < 2:3217551/91‑1 (MQ=255) tCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCa < 2:1021953/91‑1 (MQ=255) cAAATTCTTTACGATGCTTCTTCGCAAATTCTATCGCGTTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCAt < 1:525864/91‑1 (MQ=255) cAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCAt > 2:442354/1‑91 (MQ=255) | CCTACAACATTTGTAGCTTTAACTTTTAGTCCAAAGTTATCTTTAAAGAATTGTTCACCTACTTTTTCAAATTCTTTACGATGCTTCTTCGCAAATTCAATCGCATTTTTTTCTGCAGGCGGTTGAAAGCCTTGGCCTACATATTTTGAAGCTTCCAT > USA300TCH1516_ALE/1608602‑1608759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |