| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1834059 = | 150 (0.740) | 17 (0.100) | 7/138 | NT | 11.6% | intergenic (+8/‑106) | osmC/USA300HOU_RS09140 | Peroxiredoxin OsmC/Soluble hydrogenase 42 kDa subunit |
| ? | USA300TCH1516_ALE | 1834098 = | 130 (0.740) | intergenic (+47/‑67) | osmC/USA300HOU_RS09140 | Peroxiredoxin OsmC/Soluble hydrogenase 42 kDa subunit | |||||
Only 100 of 249 total aligned reads displayed.
ATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCGTTGTTA > USA300TCH1516_ALE/1834008‑1834188 | ataatGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACttt < 2:2774721/91‑1 (MQ=255)ataatGTGGACATAAAAATCTATCACATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACttt < 2:3743043/91‑1 (MQ=255) taatGTGGACATATAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACtttt < 1:3962497/91‑1 (MQ=255) tgtgGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTa > 1:293520/1‑91 (MQ=255) gtgGACATAAAAATCTATCCCATCGTTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAg < 2:3688490/91‑1 (MQ=255) gtgGACATAAAAATCTATCCCATCATTCAGGCAAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAg < 1:3360416/91‑1 (MQ=255) cATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCttt < 1:798912/91‑1 (MQ=255) cATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCttt < 1:546211/91‑1 (MQ=255) aTAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCtttt < 1:3378399/91‑1 (MQ=255) aaaaTCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTaaa > 1:233202/1‑91 (MQ=255) aaTCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAAtt < 1:2027943/91‑1 (MQ=255) tCTATCCCATCATTCAGGCCATATAGAATCGTTAAGTGATAACGTGTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAAtttt < 2:2980201/91‑1 (MQ=255) tCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAAtttt > 1:1873188/1‑91 (MQ=255) cTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTc < 2:2778250/91‑1 (MQ=255) tATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCa < 1:2906170/91‑1 (MQ=255) ttCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATTACGTTTCTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATGTTCAg < 2:2871179/90‑1 (MQ=255) aTCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAg < 1:2020064/91‑1 (MQ=255) tCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGa > 1:2537819/1‑91 (MQ=255) tCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGa > 2:1723203/1‑91 (MQ=255) cccATCATTCAGGCCAACGAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCTGaa < 2:2661208/91‑1 (MQ=255) ccATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCTGaaa < 1:3914220/91‑1 (MQ=255) ccATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaaa < 2:960328/91‑1 (MQ=255) catcatTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaaaa < 1:2393942/91‑1 (MQ=255) catcatTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaaaa > 2:1130524/1‑91 (MQ=255) catcatTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGaaaa < 1:1710098/91‑1 (MQ=255) ttCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGc < 1:2250400/91‑1 (MQ=255) tCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCt < 2:3862165/91‑1 (MQ=255) tCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCt < 2:894108/91‑1 (MQ=255) aGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaa > 2:3416190/1‑91 (MQ=255) ggCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaaa > 1:3849840/1‑91 (MQ=255) gCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTaaaa < 2:3158558/91‑1 (MQ=255) ccAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAAt < 2:2351706/91‑1 (MQ=255) ccAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAAt < 2:3704745/91‑1 (MQ=255) gaaaTAAAATCGTTAAGTGATAACGTTTGTTCGACACTATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATa < 2:3919384/90‑1 (MQ=255) aaaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAg < 2:2592874/91‑1 (MQ=255) aaaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAg < 2:657163/91‑1 (MQ=255) aaTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTACATTTTCAGAAAATTTGCTAAAATAGt > 2:782519/1‑91 (MQ=255) aTAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTg < 2:1827795/91‑1 (MQ=255) aaaaaTCGTTAAGTGAGAACGTTTGTTCAACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGa < 2:2541769/90‑1 (MQ=255) aaaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGaaa > 2:423424/1‑91 (MQ=255) aaTCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAAt < 1:1278766/91‑1 (MQ=255) tCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCt > 1:2965437/1‑91 (MQ=255) cGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCtt > 1:938876/1‑91 (MQ=255) aaaaaagtgataacgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCtt > 1:3934847‑M2/44‑91 (MQ=255) gTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCtta < 2:2109072/91‑1 (MQ=255) ttAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAGAATAGTGAAATCttat < 2:3779179/91‑1 (MQ=255) tAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttatt < 1:1260489/91‑1 (MQ=255) tAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttatt > 1:1030468/1‑91 (MQ=255) AAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttattt < 1:2876914‑M1/91‑1 (MQ=255) AAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttattt < 2:834584‑M1/91‑1 (MQ=255) GTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCttatttat < 1:1080604‑M1/91‑1 (MQ=255) gataacgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 1:3242389‑M2/36‑91 (MQ=255) gataacgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 2:2988595‑M2/36‑91 (MQ=255) gataacgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 1:844453‑M2/36‑91 (MQ=255) gataacgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 1:3242798‑M2/36‑91 (MQ=255) GATAACGTTTGTTGTACAATATAGCGTTATCAATTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 1:1880833‑M1/1‑91 (MQ=255) GATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTATTCTTTTAAATTTTCAGAAAATTTGCTAAAATATTGAAATCTTATTTATag < 2:554968‑M1/91‑1 (MQ=255) GATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGTAATCTTATTTATag < 2:2940796‑M1/91‑1 (MQ=255) GATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAAGTTGCTAAAATAGTGAAATCTTATTTATag < 1:2186382‑M1/91‑1 (MQ=255) GATAACGTTTGGTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATag > 1:3587845‑M1/1‑91 (MQ=255) tAACGTCTGTTCGACAATATAGCGCTATCACTTCTTTAGGCTTTTAAATTTTCACAACCTTTGCCAACATAGTGAAACCTTCTTTATaggc > 2:345189/1‑90 (MQ=255) TAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATagga > 2:3800564‑M1/1‑91 (MQ=255) AACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggag < 1:1584772‑M1/91‑1 (MQ=255) AACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggag < 1:522099‑M1/91‑1 (MQ=255) ACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATaggagg < 1:1111961‑M1/91‑1 (MQ=255) cgctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGc > 1:3793411‑M2/31‑91 (MQ=255) GTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCa < 1:909148‑M1/91‑1 (MQ=255) tttGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCat < 1:612525/91‑1 (MQ=255) tttGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCat > 2:338603/1‑91 (MQ=255) ctatattgtcggacaaacgttctcacttTTTTAGGCCTTTAACTTTTCAGAAAATGTGCTAAAATAGTGAAATCTTATTTATAGGAGGCat > 2:2070084‑M2/29‑91 (MQ=255) ctatattgtcgaacaaacgttatcacttTTTTAGGCTTTTAAATTTTCAGAAAAATTGCTAAAATAGTGAAATCTTATTTATAGGAGGCat > 2:3572304‑M2/29‑91 (MQ=255) ttGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCata < 1:3446543/91‑1 (MQ=255) ttGTTCGACAATATAGCGTTATCACTTTTCTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGCAATCTTATCTATAGGAGACata > 2:2425285/1‑91 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGTCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat > 2:3606811/1‑91 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat < 1:1157528/91‑1 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat > 2:81343/1‑91 (MQ=255) tGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCatat < 1:1333275/91‑1 (MQ=255) ttCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATaa < 2:2290307/91‑1 (MQ=255) tCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATaaa < 2:2771867/91‑1 (MQ=255) gACCATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAACTTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATg > 2:1309117/1‑91 (MQ=255) aCAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGt > 2:1295943/1‑91 (MQ=255) aCAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGt < 2:1338599/91‑1 (MQ=255) aCAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGt > 2:383583/1‑91 (MQ=255) tataGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGtatta > 2:1576712/1‑91 (MQ=255) ataGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGtattat > 2:3492033/1‑91 (MQ=255) taGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatc > 1:1333232/1‑91 (MQ=255) aGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatca < 2:84746/91‑1 (MQ=255) gCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTatcat < 1:2671424/91‑1 (MQ=255) gttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTAtcatca < 1:964913‑M2/81‑1 (MQ=255) gttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTAtcatca < 1:497787‑M2/81‑1 (MQ=255) ttatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCaa < 1:1567132‑M2/82‑1 (MQ=255) tatcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAAc < 2:1189455‑M2/83‑1 (MQ=255) atcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATCATCATCAaca > 2:3838865‑M2/8‑90 (MQ=255) tcacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCg < 1:1489399‑M2/85‑1 (MQ=255) cacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCCACCgt > 2:1221525‑M2/6‑91 (MQ=255) cacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCgt < 2:26073‑M2/86‑1 (MQ=255) cacttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCgt < 1:1169188‑M2/86‑1 (MQ=255) cttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCgttg > 1:3732860‑M2/4‑91 (MQ=255) ttTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCgttgt > 1:914418‑M2/3‑91 (MQ=255) ttttAGGCTTTTAAATCTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCGTTGtta < 2:3039732/91‑1 (MQ=255) | ATAATGTGGACATAAAAATCTATCCCATCATTCAGGCCAAATAAAATCGTTAAGTGATAACGTTTGTTCGACAATATAGCGTTATCACTTTTTTAGGCTTTTAAATTTTCAGAAAATTTGCTAAAATAGTGAAATCTTATTTATAGGAGGCATATAAATGTATTATCATCAACCGTTGTTA > USA300TCH1516_ALE/1834008‑1834188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |