| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1970896 | 206 (1.010) | 14 (0.080) | 9/142 | NT | 6.9% | intergenic (+85/‑648) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1970915 | 197 (1.090) | intergenic (+104/‑629) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein | |||||
Only 100 of 329 total aligned reads displayed.
CGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTA > USA300TCH1516_ALE/1970825‑1971005 | cGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCt > 2:1801490/1‑91 (MQ=255)cGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCt < 1:764189/91‑1 (MQ=255)aaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCt > 2:2712906‑M1/64‑91 (MQ=255) aatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCtt > 2:1165822‑M1/63‑91 (MQ=255) aatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCtt > 1:2486369‑M1/63‑91 (MQ=255) tcactacaaacaatgtcttcctatagcttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGt > 2:3418379‑M1/61‑91 (MQ=255) tcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGt > 2:2364279‑M1/61‑91 (MQ=255) tCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgt > 1:1849702‑M2/1‑88 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc < 2:2882355‑M2/91‑5 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 2:2941758‑M2/1‑87 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc < 1:529751‑M2/91‑5 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 1:3761824‑M2/1‑87 (MQ=255) actacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCa > 2:875421‑M1/59‑91 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca > 1:1776749‑M2/1‑86 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca < 2:3756983‑M2/91‑6 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat > 2:2510578‑M2/1‑85 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat > 2:454407‑M2/1‑85 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat > 1:730871‑M2/1‑85 (MQ=255) aaCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatc > 2:1756006‑M2/1‑84 (MQ=255) aaCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatc > 1:2730730‑M2/1‑84 (MQ=255) aCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatct > 1:1914621‑M2/1‑83 (MQ=255) caaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCAtctc > 1:2430123‑M1/55‑91 (MQ=255) cTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatctc < 1:1711037‑M2/91‑10 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct < 1:1667042/91‑1 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct > 2:2776607/1‑91 (MQ=255) aaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTGGAAATTGGATATTTCTTGTCATctct > 2:2235580‑M1/54‑91 (MQ=255) aaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTGGAAATTAGATATTTCTTGTCATctct > 2:2237414‑M1/54‑91 (MQ=255) aTTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCtt > 2:789023/1‑91 (MQ=255) caatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCtttt > 1:1221008‑M1/51‑91 (MQ=255) tttATTAATAACAGCATATTTATTTTTTAAAATTAAATGCAAAATAACCGAGATGACATTAGAAATGCGATATTTCTTGTCATCTCttttt > 2:3676952/1‑91 (MQ=255) tgtcaacctataatttgtaaacataagttcatttgatttttaaaaaaGGGATGACATTAGGAATTAGATATTTCTTGTCATCTCTTTTTTa > 1:1484597‑M1/48‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 2:315949/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa > 2:581242/1‑91 (MQ=255) attaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaa < 2:3170596/91‑1 (MQ=255) ttaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaaa > 2:1970218/1‑91 (MQ=255) taGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaaaa < 2:200777/91‑1 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt > 1:3903980/1‑91 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt < 2:3274092/91‑1 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt < 2:1722315/91‑1 (MQ=255) tAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTc > 1:598196/1‑91 (MQ=255) aCAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCaa < 1:1692570/91‑1 (MQ=255) aCAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCaa > 1:2144615/1‑91 (MQ=255) aGCATATTTCTTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAAt < 1:3783482/91‑1 (MQ=255) aGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAAt > 1:151106/1‑91 (MQ=255) gCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATg < 2:3034602/91‑1 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 1:3109602/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 2:2174112/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt < 2:2657457/91‑1 (MQ=255) tttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACtt > 2:2218564/1‑91 (MQ=255) ttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTa > 1:1371157/1‑91 (MQ=255) tatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTAt < 2:3110048/91‑1 (MQ=255) tatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTAt > 2:627990/1‑91 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg > 1:96772/1‑91 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg > 1:3224768/1‑91 (MQ=255) ttttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGt > 1:3615461/1‑91 (MQ=255) tttttAAATTTAAATGCCAACTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTACAACTCAAATGAACTTTTGtt > 1:2921116/1‑91 (MQ=255) tttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTa < 2:3079720/91‑1 (MQ=255) ttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTAc > 1:3874791/1‑91 (MQ=255) aaaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACaaa < 2:1573232/91‑1 (MQ=255) aaaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACaaa > 2:397892/1‑91 (MQ=255) aaaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACGCAAATGAACTTATGTTTACaaa < 2:3532266/91‑1 (MQ=255) aaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAt > 1:1593013/1‑91 (MQ=255) aTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAtt > 1:812243/1‑91 (MQ=255) aaaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATtata > 2:1225786/1‑91 (MQ=255) aaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAg > 2:2622592/1‑91 (MQ=255) aaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAg < 2:3878927/91‑1 (MQ=255) tGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGa < 1:2216214/91‑1 (MQ=255) tGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGa < 2:1406036/91‑1 (MQ=255) cAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGa < 1:1113440/91‑1 (MQ=255) cAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGa < 1:3537398/91‑1 (MQ=255) cAAATAAACGAGACGACATTAGAAATTAGATATCTCCTGTCATCTCTTTTTTAAAACTCAAAAGAACTTATGTATACAAGTCATAGGAAGa > 2:2820152/1‑91 (MQ=255) aaTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACa < 2:3707967/91‑1 (MQ=255) aTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAt < 1:1065938/91‑1 (MQ=255) aaCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgt > 1:1929421/1‑91 (MQ=255) aaCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgt < 2:704182/91‑1 (MQ=255) aCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtt < 2:2580371/91‑1 (MQ=255) cGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgttt > 1:3021496/1‑91 (MQ=255) GAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttg < 2:1864484‑M1/91‑1 (MQ=255) AGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttgt < 1:2845436‑M1/91‑1 (MQ=255) GATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTa < 1:1735893‑M1/91‑1 (MQ=255) ATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAg > 1:2622986‑M1/1‑91 (MQ=255) ACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGa > 2:1452167‑M1/1‑91 (MQ=255) CATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAt > 1:856684‑M1/1‑91 (MQ=255) CATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAt > 2:804726‑M1/1‑91 (MQ=255) CATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAt < 2:36205‑M1/91‑1 (MQ=255) CATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAt > 2:2729716‑M1/1‑91 (MQ=255) ATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAtt > 2:3007711‑M1/1‑91 (MQ=255) ttAGAAATTAGATATTTCTtgtcatctcgtttagttgacatttaatattaaaaaataaacatgctgttactaataaaaatagttgtgatcg < 1:3155342‑M2/91‑73 (MQ=255) ttAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAttt < 1:1797868/91‑1 (MQ=255) ttAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGAttt < 2:1734513/91‑1 (MQ=255) aGAAATTAGATATTTATtgtcatctcgtttatttggcatttaattttacaaaataaatttgctgttactaataaaaatagttgtgatcgag < 1:3367726‑M2/91‑75 (MQ=255) aaaTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGc < 2:1240051/91‑1 (MQ=255) aaaTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGc > 2:2894378/1‑91 (MQ=255) aaTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCt > 1:3400829/1‑91 (MQ=255) aaTTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCt < 2:1660803/91‑1 (MQ=255) ttAGATATTTCTtgtcatctcgtttatttggcatttaattttaaaaaataaatatgctgttactaataaaaatagttgtgatcgagaacgt < 2:2048548‑M2/91‑80 (MQ=255) aGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTaaa > 2:1082554/1‑91 (MQ=255) aGATATTTCTTGTCATCACTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTaaa < 1:3382243/91‑1 (MQ=255) gATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAAt < 1:3656477/91‑1 (MQ=255) cTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATAttt < 2:3475245/91‑1 (MQ=255) | CGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTGTAGTGATTTTCGCTTAAATCATATTTA > USA300TCH1516_ALE/1970825‑1971005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |