BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2053744 =	215 (1.060)	37 (0.190)	16/150	NT	15.9%	coding (1116/1296 nt)	purB	Adenylosuccinate lyase
*	?	USA300TCH1516_ALE	2053767 =	189 (0.990)	37 (0.190)	16/150	NT	15.9%	coding (1093/1296 nt)	purB	Adenylosuccinate lyase

Only 100 of 309 total aligned reads displayed.

GTTCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCAAATACAGT  >  USA300TCH1516_ALE/2053677‑2053857

gTTCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATAcc                                                                                            <  2:3044789/91‑1 (MQ=255)

gTTCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATAGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATAcc                                                                                            >  1:3140951/1‑91 (MQ=255)

  tCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCtt                                                                                          <  1:2050350/91‑1 (MQ=255)

  tCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCtt                                                                                          >  2:3594807/1‑91 (MQ=255)

  tCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCtt                                                                                          >  1:1809519/1‑91 (MQ=255)

   cGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCttt                                                                                         >  1:3222739/1‑91 (MQ=255)

   cGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCttt                                                                                         >  1:2322073/1‑91 (MQ=255)

    gATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTtta                                                                                        >  2:2720955/1‑91 (MQ=255)

    gATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTtta                                                                                        >  2:3094593/1‑91 (MQ=255)

    gATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTtta                                                                                        <  2:196090/91‑1 (MQ=255)

    gATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTtta                                                                                        <  2:2451637/91‑1 (MQ=255)

     aTTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTttat                                                                                       >  1:929030/1‑91 (MQ=255)

      ttAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTttatt                                                                                      <  1:2455956/91‑1 (MQ=255)

       tAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTttatta                                                                                     <  2:2616136/91‑1 (MQ=255)

         aTTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTattaat                                                                                   <  2:3257763/91‑1 (MQ=255)

          ttCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTattaatt                                                                                  <  1:388358/91‑1 (MQ=255)

          ttCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTattaatt                                                                                  >  2:3223769/1‑91 (MQ=255)

            cACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTAttaattaa                                                                                <  2:1759871/91‑1 (MQ=255)

             aCGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATtaattaat                                                                               >  2:2539505/1‑91 (MQ=255)

             aCGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATtaattaat                                                                               >  1:2885986/1‑91 (MQ=255)

              cGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATg                                                                              <  2:1302316/91‑1 (MQ=255)

              cGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATg                                                                              <  1:1386435/91‑1 (MQ=255)

               ggAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGc                                                                             <  2:1561633/91‑1 (MQ=255)

                  aCGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaa                                                                          >  2:74041/1‑91 (MQ=255)

                  aCGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaa                                                                          >  2:3534432/1‑91 (MQ=255)

                  aCGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaa                                                                          >  2:2304265/1‑91 (MQ=255)

                   cGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaat                                                                         >  1:1166793/1‑91 (MQ=255)

                     gtgtTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaataa                                                                       >  2:79346/1‑91 (MQ=255)

                     gtgtTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCtaataa                                                                       <  1:2821293/91‑1 (MQ=255)

                      tgtTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAg                                                                      >  1:3821887/1‑91 (MQ=255)

                       gtTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGa                                                                     >  2:6005/1‑91 (MQ=255)

                        ttttCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGac                                                                    >  2:1045492/1‑91 (MQ=255)

                         tttCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGaca                                                                   <  1:1358047/91‑1 (MQ=255)

                          ttCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGacac                                                                  >  1:2203870/1‑91 (MQ=255)

                           tCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACg                                                                 <  1:2702538/91‑1 (MQ=255)

                           tCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACg                                                                 <  1:2384012/91‑1 (MQ=255)

                           tCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACg                                                                 >  2:2100096/1‑91 (MQ=255)

                            cGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGt                                                                <  1:3434217/91‑1 (MQ=255)

                              tttCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTtg                                                              >  1:213765/1‑91 (MQ=255)

                              tttCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTtg                                                              <  1:353174/91‑1 (MQ=255)

                              tttCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTtg                                                              >  1:170967/1‑91 (MQ=255)

                              tttCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTtg                                                              <  1:3844107/91‑1 (MQ=255)

                              tttCCCAAGATATCATCGCTTTTGGTTGTACGTTGTCGTATGCTTCTTCACGAACCAGACCTTTATTAATTAATGCTAATAAGACACGTtg                                                              >  1:3512060/1‑91 (MQ=255)

                                        tatCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATc                                                    >  1:528277/1‑91 (MQ=255)

                                          tcatcGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCGTACCTTTAGTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAg                                                  <  1:3157532/91‑1 (MQ=255)

                                           catcGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGa                                                 >  2:2223427/1‑91 (MQ=255)

                                           catcGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGa                                                 >  1:987086/1‑91 (MQ=255)

                                           catcGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGa                                                 <  2:1466948/91‑1 (MQ=255)

                                               gCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCaa                                             <  1:911082/91‑1 (MQ=255)

                                               gCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCaa                                             >  1:2767167/1‑91 (MQ=255)

                                                 ttttGGTTGTACTTTGTCGTATGCTTCTTCACTAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGACAAAATCAGACCAAAt                                           <  1:3370422/91‑1 (MQ=255)

                                                 ttttGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAAt                                           <  2:3146034/91‑1 (MQ=255)

                                                 ttttGATTGTTCTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAAt                                           <  2:282250/91‑1 (MQ=255)

                                                     ggTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGttt                                       >  1:3607961/1‑91 (MQ=255)

                                                     ggTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGttt                                       <  2:3872246/91‑1 (MQ=255)

                                                      gTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGtttt                                      >  1:687673/1‑91 (MQ=255)

                                                       ttGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACAAGTTGTGACACAATCCGACCAAATGttctc                                     >  2:1825861/1‑88 (MQ=255)

                                                           aCTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTa                                 >  1:459451/1‑91 (MQ=255)

                                                           aCTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTa                                 >  2:2936122/1‑91 (MQ=255)

                                                           aCTTTGTCGTATGCTTCTGCACGAACGATACCTTGATTAAGTGATGCTAATAAGACGCGTTGTGAGAAAATCAGACCAAGTGTTTTATCTa                                 <  2:1685208/91‑1 (MQ=255)

                                                              ttGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGt                              <  2:1914989/91‑1 (MQ=255)

                                                              ttGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGt                              <  2:1022929/91‑1 (MQ=255)

                                                              taaagGTATGGTTCGTGAAGAAGCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGt                              <  1:3715629‑M1/86‑1 (MQ=255)

                                                                gTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGtta                            >  1:770233/1‑91 (MQ=255)

                                                                aagGTATGGTTCGTGAAGAAGCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGtta                            <  1:3302339‑M1/88‑1 (MQ=255)

                                                                 agGTATGGTTCGTGAAGAAGCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGttat                           <  2:2584385‑M1/89‑1 (MQ=255)

                                                                  cGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGttatt                          <  1:3772657/91‑1 (MQ=255)

                                                                   gtatggttcgtgaagaagcatacCTTTATTAACTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGttatta                         >  2:3881336‑M2/24‑91 (MQ=255)

                                                                    TATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTAc                        <  2:2899003‑M1/91‑1 (MQ=255)

                                                                    TATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTAc                        >  1:3016326‑M1/1‑91 (MQ=255)

                                                                     ATGCTTCTTCACGAACCATACCTTTATTAGTTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACg                       >  2:2358287‑M1/1‑91 (MQ=255)

                                                                     ATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACCCGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACg                       <  2:3468606‑M1/91‑1 (MQ=255)

                                                                     ATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACg                       <  1:1276173‑M1/91‑1 (MQ=255)

                                                                      TGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGc                      <  1:2338272‑M1/91‑1 (MQ=255)

                                                                      TGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGc                      >  2:2184061‑M1/1‑91 (MQ=255)

                                                                       GCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCa                     <  1:156001‑M1/91‑1 (MQ=255)

                                                                        cttcttCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCat                    <  1:1101209/91‑1 (MQ=255)

                                                                         ttcgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCata                   >  1:294746‑M2/18‑91 (MQ=255)

                                                                          tcttcACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCatat                  >  1:103979/1‑91 (MQ=255)

                                                                          tcgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCatat                  >  1:318612‑M2/17‑91 (MQ=255)

                                                                          tcgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCatat                  >  1:2387495‑M2/17‑91 (MQ=255)

                                                                          tcgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCatat                  >  2:441243‑M2/17‑91 (MQ=255)

                                                                           cttcACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATCTTATTACGCAtatt                 >  1:1891089/1‑91 (MQ=255)

                                                                           cgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtatt                 >  2:1160776‑M2/16‑91 (MQ=255)

                                                                           cgtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtatt                 >  1:16232‑M2/16‑91 (MQ=255)

                                                                            gtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtatta                >  2:1374829‑M2/15‑91 (MQ=255)

                                                                            gtgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtatta                >  2:1356513‑M2/15‑91 (MQ=255)

                                                                             tgaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtattat               >  1:1776105‑M2/14‑91 (MQ=255)

                                                                             tgaagaagcatacCTTTATTAATTAACGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTAGTACGCAtattat               >  2:3280804‑M2/14‑91 (MQ=255)

                                                                             tcACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAACTGTTTTATCTATGTTATTACGCAtattat               >  1:1446379/1‑91 (MQ=255)

                                                                             tcACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtattat               >  1:1985814/1‑91 (MQ=255)

                                                                             tcACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCAtattat               >  2:811496/1‑91 (MQ=255)

                                                                              gaagaagcatacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATc              >  1:63415‑M2/13‑91 (MQ=255)

                                                                              gaagaagcatacCTTTATTAATTAATGCTAATAAGACACGCTGTGCGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATc              >  2:3759418‑M2/13‑91 (MQ=255)

                                                                              cACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATc              <  2:1257775/91‑1 (MQ=255)

                                                                                cGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCtt            >  1:2502990/1‑91 (MQ=255)

                                                                                  aaCCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCa          <  2:81895/91‑1 (MQ=255)

                                                                                     catacCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCAAAt       >  2:511734‑M2/6‑91 (MQ=255)

                                                                                       tacCTTTATTAATTAATGCTAATAAGCCACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCAAATAc     >  2:2245741‑M2/4‑91 (MQ=255)

                                                                                          cTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCAAATACAGt  <  2:403173/91‑1 (MQ=255)

GTTCGATTAATTCACGGAACGGTGTTTTCGTTTCCCAAGATATCATCGCTTTTGGTTGTACTTTGTCGTATGCTTCTTCACGAACCATACCTTTATTAATTAATGCTAATAAGACACGTTGTGAGAAAATCAGACCAAATGTTTTATCTATGTTATTACGCATATTATCTTCAAATACAGT  >  USA300TCH1516_ALE/2053677‑2053857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.