| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2057377 = | 198 (0.970) | 27 (0.150) | 13/138 | NT | 16.3% | intergenic (+134/+158) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 2057415 = | 106 (0.600) | intergenic (+172/+120) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein | |||||
Only 100 of 234 total aligned reads displayed.
TTAGAAAAAGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTT > USA300TCH1516_ALE/2057325‑2057505 | ttAGAAAAAGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGttt < 1:1825877/91‑1 (MQ=255) aGAAAAAGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTtct < 2:3269519/91‑1 (MQ=255) aaaaGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCAt < 1:2959914/91‑1 (MQ=255) aaaaGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCAt > 2:3319173/1‑91 (MQ=255) aaaGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTATCTCATa > 2:3502510/1‑91 (MQ=255) aGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACa < 1:648141/91‑1 (MQ=255) gCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACaa > 1:618369/1‑91 (MQ=255) cgacgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAat < 1:3491945/91‑1 (MQ=255) cgacgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAat < 2:316201/91‑1 (MQ=255) agggtatatataATCTAACAGTAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTAGATAGCTTGCTGGGGGTTTCTCATACAagat < 2:2565451/87‑1 (MQ=255) acgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAatat > 1:1188574/1‑91 (MQ=255) acgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAatat > 1:2402804/1‑91 (MQ=255) acgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAatat < 2:1136371/91‑1 (MQ=255) acgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAatat < 2:1214375/91‑1 (MQ=255) cgaTATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATg > 1:2922423/1‑91 (MQ=255) tatatataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGAt > 2:2148177/1‑91 (MQ=255) tatatataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGAt > 2:2613301/1‑91 (MQ=255) tatatataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGAt > 1:2359984/1‑91 (MQ=255) atatataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTAATATAGCTTGCTGGGGGTTTCTCATACAATATGGATc < 1:3328861/91‑1 (MQ=255) tatataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCg > 1:2198549/1‑91 (MQ=255) tatataATCTAACAATAATTTTGAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCg < 2:2404787/91‑1 (MQ=255) tataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAg < 1:135106/91‑1 (MQ=255) ataATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGc < 1:3084213/91‑1 (MQ=255) aTCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATc < 2:2058433/91‑1 (MQ=255) tAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTg < 2:1753074/91‑1 (MQ=255) aaCAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGc < 1:930194/91‑1 (MQ=255) aaCAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGc > 1:1512216/1‑91 (MQ=255) aaCAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAACATCTTGc > 2:2930632/1‑91 (MQ=255) aaCAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTATACATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTCGc > 2:1542246/1‑91 (MQ=255) aCAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCa > 2:2468867/1‑91 (MQ=255) aCAATAATTTGTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCa < 1:371406/91‑1 (MQ=255) aataatTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATAGGGATCGAGCATCTTGCATg < 2:2805623/91‑1 (MQ=255) ataatTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGt < 2:1953186/91‑1 (MQ=255) tttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATaa < 1:1229446/91‑1 (MQ=255) tttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATaa < 2:145941/91‑1 (MQ=255) tttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATaa < 1:2492891/91‑1 (MQ=255) ttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGTTTGCTGCGGGTTTCTCATACAATATCGATCGAGCATCTTGCATGTATaaa > 2:3681945/1‑91 (MQ=255) ttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATaaa > 2:1255582/1‑91 (MQ=255) ttttAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATaaa > 1:525566/1‑91 (MQ=255) attgtatgagaAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACaaa > 1:3709632‑M1/12‑91 (MQ=255) ttgtatgaggAACCCCCAGCACAGGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAAt > 2:1026671‑M1/11‑91 (MQ=255) aaaTATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAAt > 1:1357350/1‑91 (MQ=255) aaaTATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAAt < 1:1901953/91‑1 (MQ=255) aaTATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATA < 2:1359346‑M1/91‑1 (MQ=255) atatTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAG < 1:1373791‑M1/91‑1 (MQ=255) tatTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGG < 1:1580047‑M1/91‑1 (MQ=255) ttAAGAACCCCCAGCATATGCTGTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCT < 1:243076‑M1/91‑1 (MQ=255) agaaacccccagcaagctatataaagcatatgctgggggttTCTCATACAATATGGATCGCGCATCTTGCATGTATAAACAAATAGGCTAt > 2:3284849‑M2/42‑91 (MQ=255) AACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCa < 2:3826222‑M1/91‑1 (MQ=255) AACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCa > 1:1085029‑M1/1‑91 (MQ=255) CCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAg > 2:3776222‑M1/1‑91 (MQ=255) CCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAg > 1:2631549‑M1/1‑91 (MQ=255) CCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAg < 2:3530918‑M1/91‑1 (MQ=255) ccagcaagctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATCAACAAATAGGCTATTCAAAGTa > 2:573511‑M2/34‑91 (MQ=255) CCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTa < 2:427413‑M1/91‑1 (MQ=255) cagcaagctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaa > 2:453788‑M2/33‑91 (MQ=255) CAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaa < 2:825970‑M1/91‑1 (MQ=255) agcaagctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaa > 2:858100‑M2/32‑91 (MQ=255) AGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaa < 1:49853‑M1/91‑1 (MQ=255) AGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaa < 1:888803‑M1/91‑1 (MQ=255) GCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaaa < 2:1435221‑M1/91‑1 (MQ=255) tatGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTa > 1:3532749/1‑91 (MQ=255) gctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc > 1:3716767‑M2/27‑91 (MQ=255) gctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc > 1:2239604‑M2/27‑91 (MQ=255) gctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc > 1:3574247‑M2/27‑91 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:2182989/91‑1 (MQ=255) tGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 2:1362908/1‑91 (MQ=255) tGCTTCATATAGCTTGCTGGGGGTTTCCCATACAATCTGGATCGAGCATCTTGCATGTATCAACAAATAGTCCATTCAAAGTCAAATTACt > 2:1655723/1‑91 (MQ=255) ctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 1:1637788‑M2/26‑91 (MQ=255) ctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 1:3835395‑M2/26‑91 (MQ=255) ctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 2:2925033‑M2/26‑91 (MQ=255) tatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 2:2504863‑M2/25‑91 (MQ=255) gCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 2:876262/1‑91 (MQ=255) gCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 2:3078731/1‑91 (MQ=255) gCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 1:790032/1‑91 (MQ=255) gCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTACTCAAAGTAAAATTACTc > 1:3384757/1‑91 (MQ=255) ttATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaatttta < 1:1595208‑M1/91‑14 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttac < 2:1843988‑M1/91‑15 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAac > 2:51020‑M2/1‑89 (MQ=255) tatataGCGTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttac < 2:747182‑M1/91‑15 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttact < 1:912492‑M1/91‑16 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa < 1:2851485‑M2/91‑9 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa < 1:3127253‑M2/91‑9 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa > 1:3918799‑M2/1‑83 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaat < 1:435662‑M1/91‑22 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaat < 2:1112542‑M1/91‑22 (MQ=255) ttGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaata < 1:3267969‑M1/91‑23 (MQ=255) ggtggTTGCTCATACAATATGGATCGCGCATCTAGCATTTAGAAACAAATCTGCCATGCAAAGTACAATTACTCAATCTGTGAATAGCCtt < 2:235954/88‑1 (MQ=255) gggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCtt < 1:1944186‑M2/84‑1 (MQ=255) gggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCtt > 1:2104929‑M2/8‑91 (MQ=255) gggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCtt > 1:3217523‑M2/8‑91 (MQ=255) gggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTc < 1:1488702‑M2/86‑1 (MQ=255) gggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTc > 2:2224121‑M2/6‑91 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc > 1:3951226‑M2/5‑91 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc < 2:2991518‑M2/87‑1 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc < 2:2732063‑M2/87‑1 (MQ=255) gttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCct < 1:709379‑M2/88‑1 (MQ=255) ttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctc > 1:1535516‑M2/3‑91 (MQ=255) tTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctct > 1:2706856‑M2/2‑91 (MQ=255) tctcATACAATATGGATCGAGCATCTTGCATGTATAAACAAATATGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCtt < 2:3545314/91‑1 (MQ=255) | TTAGAAAAAGCGACGATATATATAATCTAACAATAATTTTTAAAATATTAAGAACCCCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTT > USA300TCH1516_ALE/2057325‑2057505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |