BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2256396 =	157 (0.770)	23 (0.140)	8/132	NT	13.7%	intergenic (+49/+72)	deoD1/dps	Purine nucleoside phosphorylase DeoD‑type 1/General stress protein 20U
*	?	USA300TCH1516_ALE	2256443 =	161 (0.960)	23 (0.140)	8/132	NT	13.7%	intergenic (+96/+25)	deoD1/dps	Purine nucleoside phosphorylase DeoD‑type 1/General stress protein 20U

Only 100 of 289 total aligned reads displayed.

TAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACAT  >  USA300TCH1516_ALE/2256354‑2256533

tAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttat                                                                                           >  1:419782/1‑91 (MQ=255)

tAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttat                                                                                           <  1:438553/91‑1 (MQ=255)

tAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttat                                                                                           >  2:3503431/1‑91 (MQ=255)

  aaTTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttattt                                                                                         >  2:354198/1‑91 (MQ=255)

   aTTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttattta                                                                                        <  2:3889509/91‑1 (MQ=255)

     tGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTtata                                                                                      <  2:3812069/91‑1 (MQ=255)

      gACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTatat                                                                                     >  2:2967824/1‑91 (MQ=255)

       aCTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatt                                                                                    <  2:2779018/91‑1 (MQ=255)

       aCTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatt                                                                                    <  1:298306/91‑1 (MQ=255)

       aCTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatt                                                                                    >  1:1627873/1‑91 (MQ=255)

        cTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatta                                                                                   <  2:2270596/91‑1 (MQ=255)

        cTTTAATTGCTCTTTAACAATGCGATTAAACCCAAAAAGCCAACACATTCTGGGCGTCTCCACATTTATGTGTTGGCTTTTATTTAtatta                                                                                   >  1:3511339/1‑91 (MQ=255)

         tttAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtattat                                                                                  <  1:3829664/91‑1 (MQ=255)

         taagctaatctacagataagtaataatataaatAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtattat                                                                                  >  1:1763194‑M1/34‑91 (MQ=255)

           tAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATAttatta                                                                                >  2:1164666/1‑91 (MQ=255)

            aaTTGCTCTTTAACAAGGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTAc                                                                               <  2:2325700/91‑1 (MQ=255)

             gttGCTCTGTGACAGTGCGATTAAACTCAAAAAGCCATCACAGTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTAca                                                                              <  2:402887/90‑2 (MQ=255)

             aTTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACt                                                                              <  2:122807/91‑1 (MQ=255)

              ttGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACtt                                                                             >  2:1293070/1‑91 (MQ=255)

               tGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTATTTa                                                                            >  1:3067533/1‑91 (MQ=255)

               tGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTa                                                                            <  1:2099707/91‑1 (MQ=255)

                gCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTAt                                                                           <  1:672813/91‑1 (MQ=255)

                  tctTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCt                                                                         >  2:220597/1‑91 (MQ=255)

                  tctTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCt                                                                         >  1:3201728/1‑91 (MQ=255)

                   ctTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTg                                                                        >  2:2385523/1‑91 (MQ=255)

                    tttAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGt                                                                       <  2:2540537/91‑1 (MQ=255)

                     ttAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTa                                                                      <  2:2483511/91‑1 (MQ=255)

                      tAACAGTGCGATTAAGCTCAAATAGCCAACACATTCTGGGCGTATCCCCCTTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAg                                                                     <  2:1631350/91‑1 (MQ=255)

                       aaCAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGa                                                                    >  1:911230/1‑91 (MQ=255)

                        aCAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGAt                                                                   >  2:2689021/1‑91 (MQ=255)

                         cAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGAtt                                                                  >  2:735106/1‑91 (MQ=255)

                          aaTGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTa                                                                 >  2:1579374/1‑91 (MQ=255)

                           aTGCGATTAAACTCAAAAAGCCAACACTTTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAg                                                                <  2:2355027/91‑1 (MQ=255)

                             gCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCt                                                              >  2:844131/1‑91 (MQ=255)

                              cGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCtt                                                             <  1:2304409/91‑1 (MQ=255)

                               ataatataaataaaagccaacacataaatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTta                                                            >  1:1763432‑M2/59‑91 (MQ=255)

                                aTTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaa                                                           <  2:3695066/91‑1 (MQ=255)

                                aTTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaa                                                           <  1:2360986/91‑1 (MQ=255)

                                 ttAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaag                                                          <  2:799987/91‑1 (MQ=255)

                                 ttAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaag                                                          >  2:770976/1‑91 (MQ=255)

                                 aatataaatAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaag                                                          >  2:64422‑M1/10‑91 (MQ=255)

                                  tAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaagt                                                         <  1:3910565/91‑1 (MQ=255)

                                       tCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGAt                                                    >  1:2530223/1‑91 (MQ=255)

                                       tCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGAt                                                    >  2:1409325/1‑91 (MQ=255)

                                       aataaaagccaacacataaatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGAt                                                    >  2:2349597‑M2/51‑91 (MQ=255)

                                        cAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGAtt                                                   <  2:1486175/91‑1 (MQ=255)

                                             AGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAAc                                              <  2:891640‑M1/91‑1 (MQ=255)

                                               CCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACAt                                            >  1:2017514‑M1/1‑91 (MQ=255)

                                                CAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATc                                           <  2:3162112‑M1/91‑1 (MQ=255)

                                                CAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATc                                           <  1:801655‑M1/91‑1 (MQ=255)

                                                 AACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATcc                                          >  2:2060277‑M1/1‑91 (MQ=255)

                                                  ACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCa                                         <  1:2381523‑M1/91‑1 (MQ=255)

                                                  ACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCa                                         >  2:1821450‑M1/1‑91 (MQ=255)

                                                  ACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCa                                         <  1:3827228‑M1/91‑1 (MQ=255)

                                                     CATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAAtt                                      <  2:1053480‑M1/91‑1 (MQ=255)

                                                      ATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTa                                     <  1:1766734‑M1/91‑1 (MQ=255)

                                                      ATTCTGGGCGTATCCCCATTTATGTGTTGGCATTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTa                                     <  2:1400547‑M1/91‑1 (MQ=255)

                                                       TTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTAt                                    <  1:2151931‑M1/91‑1 (MQ=255)

                                                       TTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTAt                                    >  1:2604776‑M1/1‑91 (MQ=255)

                                                        tCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTGAGTAAGATTTAAACATCCAATTATg                                   >  1:3679425/1‑91 (MQ=255)

                                                        tCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                   >  1:3771955/1‑91 (MQ=255)

                                                        tCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                   >  1:2636162/1‑91 (MQ=255)

                                                        tCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                   <  2:1376305/91‑1 (MQ=255)

                                                         cTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  1:1456039/1‑91 (MQ=255)

                                                         cTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  2:653068/1‑91 (MQ=255)

                                                         aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  1:7213‑M2/33‑91 (MQ=255)

                                                         aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  1:1838919‑M2/33‑91 (MQ=255)

                                                         aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  2:342380‑M2/33‑91 (MQ=255)

                                                         aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  1:2853822‑M2/33‑91 (MQ=255)

                                                         aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGt                                  >  1:185031‑M2/33‑91 (MQ=255)

                                                           gggCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGttt                                >  2:1531937/1‑91 (MQ=255)

                                                             gCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTAt                              >  1:1710846/1‑91 (MQ=255)

                                                             gCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTAt                              >  2:1894569/1‑91 (MQ=255)

                                                              cGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATc                             <  2:1106275/91‑1 (MQ=255)

                                                               gTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCt                            >  2:1119404/1‑91 (MQ=255)

                                                                tATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTa                           <  1:2764636/91‑1 (MQ=255)

                                                                  tCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACt                         >  2:534102/1‑91 (MQ=255)

                                                                   ccccATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTg                        <  2:1772430/91‑1 (MQ=255)

                                                                   ccccATTTATGTGTTGGCTTTTATTTATATTATGACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTg                        <  1:3240376/91‑1 (MQ=255)

                                                                    cccATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGa                       <  1:532994/91‑1 (MQ=255)

                                                                      cATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATg                     <  1:3569805/91‑1 (MQ=255)

                                                                       aTTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGt                    >  2:1968068/1‑91 (MQ=255)

                                                                       aTTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGt                    >  2:942492/1‑91 (MQ=255)

                                                                        tttATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGtt                   <  1:1069679/91‑1 (MQ=255)

                                                                        tttATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGtt                   <  2:657788/91‑1 (MQ=255)

                                                                        tttATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGtt                   <  2:2170506/91‑1 (MQ=255)

                                                                        tttATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGtt                   >  1:775935/1‑91 (MQ=255)

                                                                        tttATGTATTAGATATTAATTATACTATAACTTCTCTGTTAATTAGCTAATTTAAGATTTAAACATCCAATTATGTTTATCTACTCACGtt                   <  2:172302/91‑1 (MQ=255)

                                                                             gtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCAt              <  2:354619‑M2/79‑1 (MQ=255)

                                                                             gtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCAt              <  1:1312494‑M2/79‑1 (MQ=255)

                                                                             gtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCAt              >  2:993631‑M2/13‑91 (MQ=255)

                                                                              tgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATa             >  1:2870798‑M2/12‑91 (MQ=255)

                                                                              tgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATa             <  1:220597‑M2/80‑1 (MQ=255)

                                                                               gttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATAc            >  2:2548440‑M2/11‑91 (MQ=255)

                                                                                 tggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCt          <  2:3090646‑M2/83‑1 (MQ=255)

                                                                                    cttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCtata       >  2:612764‑M2/6‑91 (MQ=255)

                                                                                      tttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATaaa     >  2:3446774‑M2/4‑91 (MQ=255)

                                                                                        tATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACa   <  2:2727221‑M2/90‑1 (MQ=255)

                                                                                        tATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACa   >  1:2815980‑M2/2‑91 (MQ=255)

                                                                                         atttatATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACat  >  1:1045849/1‑91 (MQ=255)

TAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACAT  >  USA300TCH1516_ALE/2256354‑2256533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.