| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2440052 | 151 (0.740) | 12 (0.070) | 8/136 | NT | 8.3% | intergenic (+13/+53) | USA300HOU_RS12570/malP | hypothetical protein/PTS system maltose‑specific EIICB component |
| ? | USA300TCH1516_ALE | = 2440086 | 136 (0.790) | intergenic (+47/+19) | USA300HOU_RS12570/malP | hypothetical protein/PTS system maltose‑specific EIICB component | |||||
Only 100 of 235 total aligned reads displayed.
CAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATAC > USA300TCH1516_ALE/2439997‑2440175 | cAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTg > 1:3930947‑M2/1‑90 (MQ=255)cAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTg < 2:3096799‑M2/91‑2 (MQ=255) aaTTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTga < 2:3627546‑M2/91‑3 (MQ=255) caaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATCACTATACGATGATCATTTACAATGATTGCGTATAGTg > 2:2608814‑M1/43‑91 (MQ=255) aTTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgat < 2:3412493‑M2/91‑4 (MQ=255) aTTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgat > 2:3235599‑M2/1‑88 (MQ=255) ttATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatg < 1:2418413‑M2/91‑5 (MQ=255) aaatggttgaggatcaatcgtccgaagataaataatacaaaAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGAtg > 1:911289‑M1/42‑91 (MQ=255) ataGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtg < 2:1703159‑M2/91‑7 (MQ=255) taGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgt > 2:2908916‑M2/1‑84 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtc < 2:989610‑M2/91‑9 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtc < 1:1949290‑M2/91‑9 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtc < 2:1423402‑M2/91‑9 (MQ=255) aGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtc > 2:2716666‑M2/1‑83 (MQ=255) gATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtct < 2:2555415‑M2/91‑10 (MQ=255) gATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtct > 1:615752‑M2/1‑82 (MQ=255) aTCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtctt > 1:1001857‑M2/1‑81 (MQ=255) tCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttt < 2:2291059‑M2/91‑12 (MQ=255) tCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttt < 2:773894‑M2/91‑12 (MQ=255) cGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACCTC‑‑TATACGATGATCATTTACAATGATTCCGTCTAGTgatctgtctttc < 1:1433226‑M2/91‑13 (MQ=255) aggatcaatcgtccgaagataaataatacaaaAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑ttttt > 1:727423‑M1/33‑91 (MQ=255) cATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑ttttttt > 2:1812021/1‑91 (MQ=255) cATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑ttttttg > 1:2065389/1‑90 (MQ=255) cATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑ttttttg > 1:3426368/1‑90 (MQ=255) tCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGt > 1:2212269/1‑91 (MQ=255) tCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGt < 1:1627881/91‑1 (MQ=255) tATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGtat > 2:3218016/1‑91 (MQ=255) aTGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGtatt > 1:2560923/1‑91 (MQ=255) gAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGtattat < 1:2646362/91‑1 (MQ=255) gCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTAttattt < 1:3777978/91‑1 (MQ=255) aaaGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTAttatttat > 1:3615952/1‑91 (MQ=255) aaGCTCGTATATCATAATAAAAGACTCATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATc < 1:3690935/91‑1 (MQ=255) aaGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATc < 1:3703685/91‑1 (MQ=255) aaGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATc < 1:64469/91‑1 (MQ=255) aaGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATc > 2:2805158/1‑91 (MQ=255) aGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCt > 1:1388304/1‑91 (MQ=255) gCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTCTTTTTTTTGTATTATTTATCt > 1:2885395/1‑91 (MQ=255) cGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCgg > 1:2781768/1‑91 (MQ=255) gTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGa > 1:1402971/1‑91 (MQ=255) gTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGa > 1:3856603/1‑91 (MQ=255) tataTCATAATAAAAGACGCATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGAc < 1:3168599/91‑1 (MQ=255) tataTCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGAc < 1:2798440/91‑1 (MQ=255) tataTCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTCTATTATTTATCCTCGGAc > 2:814936/1‑91 (MQ=255) atatCATAATAAAAGCCACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACg > 1:3374500/1‑91 (MQ=255) atatCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACg > 1:1079461/1‑91 (MQ=255) atatCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACg > 2:3313283/1‑91 (MQ=255) tatCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGa < 1:3011443/91‑1 (MQ=255) tCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGAtt < 1:2699356/91‑1 (MQ=255) tCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGAtt < 1:309018/91‑1 (MQ=255) cATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTg < 2:539547/91‑1 (MQ=255) cATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTg < 2:3078034/91‑1 (MQ=255) ataaAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATcc < 1:1377628/91‑1 (MQ=255) taaAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCt > 1:1850406/1‑91 (MQ=255) taaAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCt > 2:3700876/1‑91 (MQ=255) AAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTc > 1:1143217‑M1/1‑91 (MQ=255) aaaGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacga < 1:3283914‑M2/91‑47 (MQ=255) AAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCa < 2:1443947‑M1/91‑1 (MQ=255) AAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGACGTGTC‑TTTTTTTGTATTATTTATCTTCGGCCGATTGATCCTCa < 2:2870938‑M1/91‑1 (MQ=255) AAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCaa > 1:1647646‑M1/1‑91 (MQ=255) AGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAc < 2:1777275‑M1/91‑1 (MQ=255) AGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAc < 2:238702‑M1/91‑1 (MQ=255) AGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAc > 1:864296‑M1/1‑91 (MQ=255) GACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAcc > 1:356983‑M1/1‑91 (MQ=255) GACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAcc < 1:1344971‑M1/91‑1 (MQ=255) GACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAAcc < 1:565241‑M1/91‑1 (MQ=255) ACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCa < 1:2675827‑M1/91‑1 (MQ=255) cacaTC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctat < 1:1076556‑M2/91‑52 (MQ=255) CACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCAt > 1:131203‑M1/1‑91 (MQ=255) acaTC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctata < 1:3136243‑M2/91‑53 (MQ=255) caTC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTgatgtgtcttttattatgatatacgagctttgctcatagatgacgatctataa < 2:2131468‑M2/91‑54 (MQ=255) ATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTg > 1:1213546‑M1/1‑91 (MQ=255) ataCGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCa < 2:1377808/91‑1 (MQ=255) ataCGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCa > 2:682282/1‑91 (MQ=255) taCGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCaa < 1:2596459/91‑1 (MQ=255) cGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAAt > 1:2333697/1‑91 (MQ=255) atgatCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGc > 2:2281541/1‑91 (MQ=255) atCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTTTTTTTTATCTTCGGACGATTGCTCCTCAACCATTTGTTCAAATGCTTc > 2:614738/1‑91 (MQ=255) tCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTcc > 1:1355608/1‑90 (MQ=255) cATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCAc < 1:3892083/91‑1 (MQ=255) aTTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTCTTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACg < 2:1754774/91‑1 (MQ=255) aTTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACg < 2:2039227/91‑1 (MQ=255) ttACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGaa > 2:919397/1‑91 (MQ=255) tgtaaaTGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGaa > 1:511666/5‑91 (MQ=255) tACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATTCTTCACGAAc > 2:3871147/1‑91 (MQ=255) aCAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACt < 1:779828/91‑1 (MQ=255) aCAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACt < 2:2084340/91‑1 (MQ=255) aagATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTGAACCATTTGTTTCAATGATTCCCGCACTtgt > 2:2548856/3‑91 (MQ=255) tGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTtgtg < 2:1337137/91‑1 (MQ=255) tGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTtgtg < 2:1187749/91‑1 (MQ=255) gATTGCGTATAGTTATGTGTC‑TTTTTTTGTATTATTTTTCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGTACTTGTgg < 2:315493/91‑1 (MQ=255) gATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTgg < 2:2779670/91‑1 (MQ=255) gATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTgg < 2:1121975/91‑1 (MQ=255) gCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACt < 1:2133205/91‑1 (MQ=255) gTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGt > 2:113989/1‑91 (MQ=255) gTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGt > 2:798512/1‑91 (MQ=255) gTATAGTGATGAGTC‑TTTTTTTGCATTATTTATCTTCGGACGATTGATCGTCAACCATTGGTTCAAATGCTTCACGAACTTGTGGTACTGt < 2:3010341/91‑1 (MQ=255) ataGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCa < 1:9801/91‑1 (MQ=255) aGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATa < 2:330617/91‑1 (MQ=255) gTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATAc < 1:1566742/91‑1 (MQ=255) gTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATAc > 1:181081/1‑91 (MQ=255) | CAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAATAAAAGACACATC‑‑TATACGATGATCATTTACAATGATTGCGTATAGTGATGTGTC‑TTTTTTTGTATTATTTATCTTCGGACGATTGATCCTCAACCATTTGTTCAAATGCTTCACGAACTTGTGGTACTGTCATAC > USA300TCH1516_ALE/2439997‑2440175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |