| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 3781 | 672 (0.730) | 119 (0.150) | 18/140 | NT | 16.4% | intergenic (+397/‑87) | USA300HOU_pUSA300HOUMR0005/USA300HOU_pUSA300HOUMR0006 | hypothetical protein/hypothetical protein |
| ? | CP000731 | = 3794 | 628 (0.790) | intergenic (+410/‑74) | USA300HOU_pUSA300HOUMR0005/USA300HOU_pUSA300HOUMR0006 | hypothetical protein/hypothetical protein | |||||
Only 100 of 1183 total aligned reads displayed.
AAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAATCTAC > CP000731/3704‑3884 | cccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGa > 1:2971495‑M1/69‑91 (MQ=255)aaaCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAACGTGa > 1:2648334/1‑91 (MQ=255) ccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAg > 2:335396‑M1/68‑91 (MQ=255) cataacttttttgaattacatcgacgatacggcgtcgaaagaaaaaataaagagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAg > 2:3693884‑M1/68‑91 (MQ=255) cataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAgg > 1:616771‑M1/67‑91 (MQ=255) aCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAgg < 1:112724‑M2/91‑3 (MQ=255) cTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggt > 1:475832‑M2/1‑88 (MQ=255) ataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGt > 2:1184728‑M1/66‑91 (MQ=255) ataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGt > 1:1757312‑M1/66‑91 (MQ=255) tataTGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggta < 1:119612‑M2/91‑5 (MQ=255) tataTGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggta < 1:1585826‑M2/91‑5 (MQ=255) taacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaGAAAGCTACCCCAGATAAAGTGAGGTa > 2:2244423‑M1/65‑91 (MQ=255) atatGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtag < 2:783505‑M2/91‑6 (MQ=255) atatGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtag > 1:2406606‑M2/1‑86 (MQ=255) aacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTCAGGTAg > 1:3073474‑M1/64‑91 (MQ=255) actgttttgaattacatcgacgatacggcgtcgaaagaaaaataaataggccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTAGc > 2:2473174‑M1/63‑91 (MQ=255) gAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtagcttt < 1:777657‑M2/91‑10 (MQ=255) ttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttc > 1:2685174‑M1/57‑91 (MQ=255) cACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttct > 1:353993/1‑91 (MQ=255) aCCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttctt < 2:1127757/91‑1 (MQ=255) ccccTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttcttt < 2:1235214/91‑1 (MQ=255) ccTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTCCCCCAGATAAAGTGAGGTAGCTTTTCCTTTCa > 2:1018234/1‑91 (MQ=255) tAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATa > 2:2770210/1‑91 (MQ=255) aaaTCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATAc > 1:3862986/1‑91 (MQ=255) tCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGt < 2:550764/91‑1 (MQ=255) tttAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCt > 2:3180009/1‑91 (MQ=255) ttAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCta > 2:717691/1‑91 (MQ=255) ttAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCta < 2:1962096/91‑1 (MQ=255) tAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtat > 1:2155260/1‑91 (MQ=255) tAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtat > 2:1439067/1‑91 (MQ=255) aaaaTGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtatt < 1:2471568/91‑1 (MQ=255) aTGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtatttat < 1:3946950/91‑1 (MQ=255) gCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTctttattt > 1:1376774/1‑91 (MQ=255) gCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTatctattt > 2:80487/1‑91 (MQ=255) cccTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTAtttt > 1:1059256/1‑91 (MQ=255) cccTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTAtttt > 2:3409491/1‑91 (MQ=255) cccTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTAtttt > 2:2694770/1‑91 (MQ=255) tctTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTtttct < 2:252411/91‑1 (MQ=255) tctTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTtttct > 1:37654/1‑91 (MQ=255) ctTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTtttctt > 1:1012438/1‑91 (MQ=255) aaaaTTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCg < 2:2315374/91‑1 (MQ=255) aTTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACg > 1:26066/1‑91 (MQ=255) aTTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACg > 1:842077/1‑91 (MQ=255) ttCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGc > 1:2265686/1‑91 (MQ=255) cAAAATAAGGCCATAAAAAATAAAAGCTACCCCACATAAAGTGAGGTACCTTTTTCTATCATACGGTCTATTTATTTTTCTTTCGACGCCg > 2:2634888/1‑91 (MQ=255) aaaaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGt < 2:1336947/91‑1 (MQ=255) aaaaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGt > 2:2978662/1‑91 (MQ=255) aaTAAGTGCATAAGAAATAACAGCTACCCCAGATAAAGTAAGGTAGCTTTTTCTTTCATACTGTCTATTTATTTTTCTTTCGACGCCGTAt < 2:1496069/91‑1 (MQ=255) aTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtc > 1:2734874/1‑91 (MQ=255) aTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtc > 1:2921852/1‑91 (MQ=255) aGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCGTACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc < 1:3338676/91‑1 (MQ=255) aGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc > 2:3853254/1‑91 (MQ=255) aGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc < 1:938754/91‑1 (MQ=255) gggCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtcg > 1:1246063/1‑91 (MQ=255) gCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGATGTCGTATCGTGGAt > 2:397222/1‑91 (MQ=255) cATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATg < 2:3107441/91‑1 (MQ=255) aTAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGt < 2:879456/91‑1 (MQ=255) aTAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGt > 2:3534176/1‑91 (MQ=255) aTAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGt < 1:1509623/91‑1 (MQ=255) aTAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGt < 2:377475/91‑1 (MQ=255) aaaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAAtt < 1:2565320/91‑1 (MQ=255) aaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTc < 1:1956075/91‑1 (MQ=255) aTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaa < 1:3707681/91‑1 (MQ=255) tAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaa > 1:2514350/1‑91 (MQ=255) aaaaGCTACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgatt < 1:3461893‑M2/91‑69 (MQ=255) aaaaGCTACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgatt < 1:329096‑M2/91‑69 (MQ=255) AAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGCCGCCGTATCGTCGATGTAATTCaaaa < 2:155835‑M1/91‑1 (MQ=255) AAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaaa < 2:1627349‑M1/91‑1 (MQ=255) aaaGCTACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattc < 2:208477‑M2/91‑70 (MQ=255) AAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaaaa < 2:3478721‑M1/91‑1 (MQ=255) AAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaaaa > 1:2213541‑M1/1‑91 (MQ=255) aGCTACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcat < 2:1775407‑M2/91‑72 (MQ=255) AGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAg < 2:944235‑M1/91‑1 (MQ=255) gCTACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcata < 2:23903‑M2/91‑73 (MQ=255) GCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATtcaaaaaaag < 1:3118044‑M1/91‑3 (MQ=255) GCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGt < 1:682133‑M1/91‑1 (MQ=255) CTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGtt < 1:1416217‑M1/91‑1 (MQ=255) CTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGtt < 1:1294881‑M1/91‑1 (MQ=255) tACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatata < 1:2344589‑M2/91‑75 (MQ=255) tACCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatata < 1:36402‑M2/91‑75 (MQ=255) aCCCCAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagattgaggggtgattcatatag < 2:1844585‑M2/91‑76 (MQ=255) ACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTAt > 1:425968‑M1/1‑91 (MQ=255) cccgAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatatagt < 2:3622391‑M2/91‑77 (MQ=255) ccccAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatatagt < 2:3236621‑M2/91‑77 (MQ=255) ccAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggtattttatagatttaggggtgattcatatagttt < 1:3513192‑M2/91‑79 (MQ=255) ccAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatatagttt < 2:2853727‑M2/91‑79 (MQ=255) ccAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatatagttt < 1:1821545‑M2/91‑79 (MQ=255) cAGATAAAGTGAggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgattcatatagtttt < 2:606397‑M2/91‑80 (MQ=255) cAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGc < 1:3233916/91‑1 (MQ=255) aGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCt < 1:2044435/91‑1 (MQ=255) gATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCta < 2:743056/91‑1 (MQ=255) gATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCta < 1:535053/91‑1 (MQ=255) gATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCta > 1:2815084/1‑91 (MQ=255) aTAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCtat < 2:3065333/91‑1 (MQ=255) tAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTAATTTTTCTTTCGACGCCGTATCGTCGAAAAAAAAAAAAAAAGTTATGGGCtata < 2:1718281/91‑1 (MQ=255) aGTGAGGTAGCTTTTTCTTTCCTACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTCATTCAAACAAGTTATGCGCTATAAAt > 2:2910105/1‑91 (MQ=255) aGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAAt < 2:454985/91‑1 (MQ=255) aGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAAt > 1:1656750/1‑91 (MQ=255) aGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAAt > 2:2006589/1‑91 (MQ=255) gAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGTCGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAATCTa > 2:2187091/1‑91 (MQ=255) | AAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAAAAGTTATGGGCTATAAATCTAC > CP000731/3704‑3884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |