| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 68500 = | NA (NA) | 7 (0.040) | 4/154 | NT | 5.0% | coding (616/852 nt) | USA300TCH1516_00061 | hypothetical protein |
| ? | USA300TCH1516_ALE | 68542 = | 138 (0.680) | coding (658/852 nt) | USA300TCH1516_00061 | hypothetical protein | |||||
Only 100 of 195 total aligned reads displayed.
AGCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATA > USA300TCH1516_ALE/68452‑68632 | gtaaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatg < 1:1039223‑M2/1‑1 (MQ=255)gtaaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatg > 2:3415199‑M2/91‑91 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 1:835709‑M2/2‑1 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc > 1:3196613‑M2/90‑91 (MQ=255) taaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGc < 1:1192339‑M2/2‑1 (MQ=255) gCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGc > 2:2133061/1‑91 (MQ=34) gCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGc > 1:3579939/1‑91 (MQ=34) gCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGc > 2:3641845/1‑91 (MQ=34) gCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGc > 1:1582661/1‑91 (MQ=34) aaaaagtttcagtctttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:3291113‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 1:1358203‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:3341407‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacttctgataatGcc < 2:2733520‑M2/3‑1 (MQ=255) aaaaagtttcagactttagcgaggaatggaaactttctatcggggcgttatcggcaggggttccctttcgggacatacttctgataatGcc < 2:3881764‑M2/3‑1 (MQ=255) aaaaagtttcagactgtagcgaggaatggaaactttctatcggggcgttatcggcaggtgttccctttcgggacatacgtctgataatGcc < 2:602763‑M2/3‑1 (MQ=255) gTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGccc > 2:1912718/1‑91 (MQ=34) gTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGccc > 2:1790184/1‑91 (MQ=34) tttATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGcccc > 1:3405036/1‑91 (MQ=34) ttATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCg > 1:1476874/1‑91 (MQ=34) tataCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGa > 2:1878388/1‑91 (MQ=34) ataCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGAt < 2:2995659/91‑1 (MQ=34) ataCATCTTATGCTTATTATAAATTGTGCGACGCAAAATGCATTATCAGTAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGAt > 2:1259151/1‑91 (MQ=11) taCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATa < 2:2903329/91‑1 (MQ=33) taCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATa < 1:877244/91‑1 (MQ=34) aCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAg > 2:2611641/1‑91 (MQ=33) aCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAg < 2:1104628/91‑1 (MQ=34) aCATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAg < 1:751357/91‑1 (MQ=34) cgtCTTTTGCTTATTATCCATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATATCGCCCCGTTAGa < 2:1963324/89‑1 (MQ=11) cATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGa < 1:1888344/91‑1 (MQ=33) cATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGa < 1:1306672/91‑1 (MQ=34) cATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGa < 2:2443251/91‑1 (MQ=34) aTCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaa < 2:1145476/91‑1 (MQ=34) aTCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaa < 2:861914/91‑1 (MQ=33) tCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGaaa > 2:3903886/1‑91 (MQ=34) tGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTc < 1:2432365/91‑1 (MQ=34) gCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTcc < 1:320850/91‑1 (MQ=34) gCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTcc < 1:2526143/91‑1 (MQ=34) cTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCa < 2:2205374/91‑1 (MQ=33) cTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCa > 2:2542846/1‑91 (MQ=34) attatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTc < 1:3867859/91‑1 (MQ=34) attatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTc < 1:887901/91‑1 (MQ=34) attatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTc < 1:2359846/91‑1 (MQ=34) ttatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTcc > 1:1068497/1‑91 (MQ=34) tatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCt < 2:1228862/91‑1 (MQ=33) tatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCt < 2:1978102/91‑1 (MQ=33) tatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCt < 2:1081026/91‑1 (MQ=34) tatCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCt < 1:2047127/91‑1 (MQ=33) gtCAATGGGGCGAAGAAAGAGGCATCATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGGTAGAAAGTTTCCATTCCTc < 2:2438159/90‑1 (MQ=11) atCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTc < 1:3249622/91‑1 (MQ=34) tCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCg > 1:2229579/1‑91 (MQ=34) cAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGc < 2:2293773/91‑1 (MQ=34) cAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGc > 1:2773721/1‑91 (MQ=33) aaTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGTACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCt > 1:3136106/1‑91 (MQ=21) aaTTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCt < 1:2713883/91‑1 (MQ=33) tgtgCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTaaa > 2:1298744/1‑91 (MQ=32) gtgCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAg > 2:1592252/1‑91 (MQ=31) tcggcaggtgttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCaa > 1:3458917‑M2/39‑91 (MQ=255) cggcaggtgttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCaat > 1:391527‑M2/38‑91 (MQ=255) tATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAg < 2:199059/91‑1 (MQ=33) tATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAg < 1:3062902/91‑1 (MQ=33) aTGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGc < 1:2464534/91‑1 (MQ=34) aTGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGc > 2:2929666/1‑91 (MQ=33) aTGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGc > 1:1924116/1‑91 (MQ=34) tGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCt > 1:2178624/1‑91 (MQ=34) tGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTATTTACATCAATAATGAGCt > 2:398642/1‑91 (MQ=18) gttccctttcgggacatacttctgataatGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGTAACTTTTTACATCAATAATGAGCt > 2:3686399‑M2/30‑91 (MQ=255) tCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTa > 1:2642804/1‑91 (MQ=34) tCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTa > 1:2643106/1‑91 (MQ=34) cccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCACTAATGAGCTTaa > 2:3283826/1‑91 (MQ=18) cccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTaa > 2:520397/1‑91 (MQ=34) cccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTaa > 1:1105050/1‑91 (MQ=34) ccGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAAt > 1:2050136/1‑91 (MQ=34) cGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATc < 2:584267/91‑1 (MQ=34) gAAGGGGAACACCTGCGGATAACGCCCGGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTGTTTACATCAACAATGAGCTTAATCa < 2:503121/91‑1 (MQ=11) gAAAGGGAACACCTGCCGATAACGCCCCGATAGAACGTTTCCATTCCCCGCTAAAGTCTGCAACTTTTTACATCAATAATGAGctcactca > 2:2080186/1‑91 (MQ=11) aaaGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCAc < 2:3209385/91‑1 (MQ=38) gggAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCActct < 1:1450602/91‑1 (MQ=39) gcaaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTa < 1:2133061/89‑1 (MQ=38) gAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTGTaa < 2:3499622/91‑1 (MQ=255) gAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTaa > 1:1246324/1‑91 (MQ=39) aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAAt > 1:1726301/1‑91 (MQ=39) aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAAt < 1:1881814/91‑1 (MQ=39) aaCACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGACCTTAATCACTCTAAt > 2:525509/1‑91 (MQ=37) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc > 1:574724/1‑91 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc < 1:1111845/91‑1 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc > 1:2317026/1‑91 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc > 2:3811833/1‑91 (MQ=39) acacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATc < 1:932172/91‑1 (MQ=39) cacCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATca < 2:3564261/91‑1 (MQ=38) acCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATcac > 2:1955824/1‑91 (MQ=40) gCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTg < 1:2609547/91‑1 (MQ=255) ccGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGt < 2:369371/91‑1 (MQ=255) cGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTa > 2:97684/1‑91 (MQ=255) aTAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAAt < 1:192536/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa > 2:3171831/1‑91 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 1:3702566/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 1:414440/91‑1 (MQ=255) tAACGCCCCGATAGAAAGTTGCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATa < 2:2363356/91‑1 (MQ=255) aaCGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAg < 2:3075965/91‑1 (MQ=255) aaCGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAg < 2:1015669/91‑1 (MQ=255) | AGCGTTTATACATCTTATGCTTATTATCAATTGTGCGAAGAAAAAGGCATTATCAGAAGTATGTCCCGAAAGGGAACACCTGCCGATAACGCCCCGATAGAAAGTTTCCATTCCTCGCTAAAGTCTGAAACTTTTTACATCAATAATGAGCTTAATCACTCTAATCACATTGTAATAGATA > USA300TCH1516_ALE/68452‑68632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |