| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 161003 = | 188 (0.920) | 22 (0.140) | 8/124 | NT | 15.1% | intergenic (+17/+114) | deoB/phnE_1 | Phosphopentomutase/Phosphate‑import permease protein PhnE |
| ? | USA300TCH1516_ALE | 161059 = | 102 (0.650) | intergenic (+73/+58) | deoB/phnE_1 | Phosphopentomutase/Phosphate‑import permease protein PhnE | |||||
Only 100 of 197 total aligned reads displayed.
TTAAAGGAATTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCGGAAAT > USA300TCH1516_ALE/160969‑161149 | aaaGGAATTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTtattat > 2:3454398/1‑91 (MQ=255) gAATTGAAATAGTTGAAAGTTAGTTATTATTAAGACGGCATGCAATTTGACTATGACAATGGTTTTCGTCACTGCTGTTTTTATTataata < 2:3139341/91‑1 (MQ=255) aaTTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATag > 2:1398104/1‑91 (MQ=255) aaTTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATag > 2:2374643/1‑91 (MQ=255) aTTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATaga < 1:2698815/91‑1 (MQ=255) gAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGaa < 2:3309087/91‑1 (MQ=255) gAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGCTTCTATTATAATagagca > 2:1968497/1‑89 (MQ=255) aaaTAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGaaa > 1:2915886/1‑91 (MQ=255) aaaTAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGCTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGaaa > 2:3255825/1‑91 (MQ=255) aaTAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAAc > 2:1257864/1‑91 (MQ=255) aaTAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAAc > 1:3499554/1‑91 (MQ=255) aTAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACg > 1:153739/1‑91 (MQ=255) tAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGt < 1:466026/91‑1 (MQ=255) aGAATAAATTTGGATATTATAAATACAGCAGGGAAGTTAACTATAACAATAGTTTTCTTGACTGCTGTTTTTATTATAATAGAGAAACGTa < 2:3016014/91‑1 (MQ=255) aaTAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAg < 1:73297/91‑1 (MQ=255) aaTAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAg > 2:1806595/1‑91 (MQ=255) aaaTTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACg < 2:704285/91‑1 (MQ=255) aaaTTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACg > 2:1575941/1‑91 (MQ=255) aaTTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACgg > 2:738271/1‑91 (MQ=255) aTTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGt < 1:1838044/91‑1 (MQ=255) tttAGATATTATAAAAACAGCAGTGGAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTa < 1:3666134/91‑1 (MQ=255) tttAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTa > 2:3336336/1‑91 (MQ=255) tttAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTa > 2:397105/1‑91 (MQ=255) aGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGa > 2:2030614/1‑91 (MQ=255) aGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGa < 2:1317565/91‑1 (MQ=255) aGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGa < 2:973404/91‑1 (MQ=255) gATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGAc < 1:3000885/91‑1 (MQ=255) gATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGAc < 1:1752464/91‑1 (MQ=255) tattatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 2:1490880/91‑1 (MQ=255) tattatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 2:1902441/91‑1 (MQ=255) tattatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 2:2272824/91‑1 (MQ=255) tattatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 1:3414529/91‑1 (MQ=255) tattatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 1:3263611/91‑1 (MQ=255) tattatAAAAACAGCAGGGAAGTTAACTATAACAATAGGTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActt < 2:100265/91‑1 (MQ=255) ttatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActtct < 1:1493580/91‑1 (MQ=255) ttatAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActtct < 1:1520373/91‑1 (MQ=255) tataAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGActtctt < 1:1066494/91‑1 (MQ=255) ATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTa > 2:1767550‑M1/1‑91 (MQ=255) AACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAg < 1:2468636‑M1/91‑1 (MQ=255) GCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGt < 1:848005‑M1/91‑1 (MQ=255) GCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGt > 1:1006162‑M1/1‑91 (MQ=255) GCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGATTTTATTATAATAGAGAAACGTAAGACGGTAGAACTTCTTATTTAGGaga < 2:24598‑M1/91‑2 (MQ=255) AGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTAt < 1:1965027‑M1/91‑1 (MQ=255) gtgaagaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATc > 1:144644‑M2/45‑91 (MQ=255) gtgaagaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATc > 1:706151‑M2/45‑91 (MQ=255) tgaagaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATcc > 1:1645097‑M2/44‑91 (MQ=255) tgaagaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAACACGGTAGGACTTCTTATTTAGGAGTATcc > 1:3173561‑M2/44‑91 (MQ=255) gaagaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCt > 2:212387‑M2/43‑91 (MQ=255) GAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCt < 2:3932736‑M1/91‑1 (MQ=255) AAGTTAACTCTAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAACACCGCAGGACTTATTATTTAGGCGTATCCTg < 2:161478‑M1/91‑1 (MQ=255) AAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTg < 2:1337543‑M1/91‑1 (MQ=255) gaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAt > 1:233026‑M2/40‑91 (MQ=255) gaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAt > 1:93482‑M2/40‑91 (MQ=255) gaaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAt > 2:2083096‑M2/40‑91 (MQ=255) gaaaacgattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAt > 1:3078727‑M2/40‑91 (MQ=255) aaaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAtt > 2:3160136‑M2/39‑91 (MQ=255) tAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt < 2:1034955/91‑1 (MQ=255) tAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt > 2:3641314/1‑91 (MQ=255) tAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt < 2:2491946/91‑1 (MQ=255) aaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt > 2:30673‑M2/38‑91 (MQ=255) aaactattgttatagttaacttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt > 1:64445‑M2/38‑91 (MQ=255) aaactattgttatagttaacttcactgctgtttttatAATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGAttt > 1:2744013‑M2/38‑91 (MQ=255) aaCTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGTGTATCCTGATTTa > 2:2679684/1‑91 (MQ=255) aaCTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTa > 1:1208932/1‑91 (MQ=255) cTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAAt > 2:802924/1‑91 (MQ=255) tataACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATg < 2:2369728/91‑1 (MQ=255) ataACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGt > 2:2888980/1‑91 (MQ=255) aaCAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTa < 1:1400546/91‑1 (MQ=255) aCAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTaa < 1:2642650/91‑1 (MQ=255) aaTAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAAc > 2:3856952/1‑91 (MQ=255) aaTAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAAc > 2:646002/1‑91 (MQ=255) aaTAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAAc > 1:3645378/1‑91 (MQ=255) tAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACaa < 1:205827/91‑1 (MQ=255) tAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACaa < 1:2456421/91‑1 (MQ=255) aGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTATGACGGTAGGACTTCTTATTTAGGAGTGTCCTGATTTAATGTTAAACAAt > 2:3005188/1‑91 (MQ=255) aGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAAt > 2:2138875/1‑91 (MQ=255) aGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAAt > 1:2384014/1‑91 (MQ=255) aGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAAt < 1:2868127/91‑1 (MQ=255) ttttCTTCACTGCTGTTTTTATTATAATAGAGAAACCTAACACGGTACGACTTCTTATTTAGGAGTTCCCTGATTTCATGTTAAACAATAc > 2:3672457/1‑91 (MQ=255) ttcttcACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGt < 1:392098/91‑1 (MQ=255) tcttcACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGtt < 1:3567466/91‑1 (MQ=255) cttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGttt > 1:1112624‑M2/19‑91 (MQ=255) cttcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGttt > 2:2190059‑M2/19‑91 (MQ=255) tcactgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTc < 1:2349773‑M2/75‑1 (MQ=255) actgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCgg < 1:1272903‑M2/77‑1 (MQ=255) actgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCgg < 2:2549315‑M2/77‑1 (MQ=255) ctgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGa > 1:340056‑M2/14‑91 (MQ=255) ctgctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGa > 2:2938212‑M2/14‑91 (MQ=255) gctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGAtt > 2:2649832‑M2/12‑91 (MQ=255) ctgtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTg < 2:898433‑M2/81‑1 (MQ=255) gtttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGaa < 1:587575‑M2/83‑1 (MQ=255) tttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAAc < 2:1440297‑M2/84‑1 (MQ=255) tttttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAAc < 2:601482‑M2/84‑1 (MQ=255) tttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCg < 1:1015116‑M2/86‑1 (MQ=255) ttatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCgg < 1:548257‑M2/87‑1 (MQ=255) tatTATAATAGAGAAGCGTAAGGCGGTAGGACTTCTTGTTTAGGAGTAGCCTGATTTAATGTTGAACAATACGTTTTCGGATTGAACCGGa < 2:497373‑M2/88‑1 (MQ=255) tatTATAATAGAGAAACGTAAGACGGTCGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGCACCGGa > 2:2439900‑M2/4‑91 (MQ=255) tatTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCGGa > 1:3267161‑M2/4‑91 (MQ=255) atTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCGGaa > 2:378872‑M2/3‑91 (MQ=255) tTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCGGaaa < 1:3186540‑M2/90‑1 (MQ=255) | TTAAAGGAATTGAAATAGAATAAATTTAGATATTATAAAAACAGCAGTGAAGTTAACTATAACAATAGTTTTCTTCACTGCTGTTTTTATTATAATAGAGAAACGTAAGACGGTAGGACTTCTTATTTAGGAGTATCCTGATTTAATGTTAAACAATACGTTTTCGGATTGAACCGGAAAT > USA300TCH1516_ALE/160969‑161149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |