| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 231639 = | 201 (0.990) | 22 (0.120) | 13/146 | NT | 10.8% | intergenic (+8/‑197) | hsdR/USA300HOU_RS01035 | Type‑1 restriction enzyme R protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 231667 = | 179 (0.960) | intergenic (+36/‑169) | hsdR/USA300HOU_RS01035 | Type‑1 restriction enzyme R protein/hypothetical protein | |||||
Only 100 of 291 total aligned reads displayed.
AAGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGAAAT > USA300TCH1516_ALE/231577‑231757 | aaGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCa > 1:3953030/1‑91 (MQ=255) aGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCat > 2:850032/1‑91 (MQ=255) aGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCat < 1:1948277/91‑1 (MQ=255) aGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCat > 2:2844245/1‑91 (MQ=255) tggaaacagaatgatggttgccaaacacatggtaccgaacaaaagagagaaaataataatGCCCCCTCGCTAGATTAGTGTAGGGGGCatt > 2:2220618‑M1/61‑91 (MQ=255) gAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCatt > 2:2553756/1‑91 (MQ=255) aaaGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCattat > 2:3135035/1‑91 (MQ=255) aaGCCATTGAATCTTTCGTGGCAGAAACAACCGAAAAATACGGTGTGTAATGATTCACCCCCCTCGCTAGATTAGTGTAGGGGGCattatt > 1:3505447/1‑91 (MQ=255) aaccaaatgatggttgccaaacacatggtaactaacaaaagatagaaaataataatGCCCCCTCGCTAGATTAGTGTAGGGGGCattatta > 1:795688‑M1/57‑91 (MQ=255) gCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCattattat > 1:323624/1‑91 (MQ=255) cATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTAttt < 1:1698399/91‑1 (MQ=255) cATTGAAGCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTCttt < 2:3500220/91‑1 (MQ=255) aTTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTAtttt < 1:2938011/91‑1 (MQ=255) aTTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTAtttt < 2:646306/91‑1 (MQ=255) ttGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTc < 2:3539594/91‑1 (MQ=255) ttGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTc < 1:2235031/91‑1 (MQ=255) gAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTa < 1:2420256/91‑1 (MQ=255) aTCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATc < 1:3184819/91‑1 (MQ=255) aTCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATc > 2:1870797/1‑91 (MQ=255) tCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCt < 1:130746/91‑1 (MQ=255) cGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATTTTTTgt < 1:3078852/91‑1 (MQ=255) gTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTgtt > 2:2523323/1‑91 (MQ=255) ggCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTgttag < 1:2159012/91‑1 (MQ=255) ggCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTgttag < 1:3906660/91‑1 (MQ=255) gCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTgttagt > 2:3278899/1‑91 (MQ=255) cAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTgttagtt > 1:239667/1‑91 (MQ=255) aaaCAACTGAAAAATTCGGTGTGTGATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTAcc < 1:616505/91‑1 (MQ=255) aaaCAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTAcc < 1:3398666/91‑1 (MQ=255) aacaacTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCa < 1:478873/91‑1 (MQ=255) aacaacTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCa < 1:1144611/91‑1 (MQ=255) acaacTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCAt > 2:1360064/1‑91 (MQ=255) acaacTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCAt < 1:1042879/91‑1 (MQ=255) caacTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCAtg > 1:3529660/1‑91 (MQ=255) acTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCAtgtg > 1:3335337/1‑91 (MQ=255) acTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCACTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCAtgtg > 1:2817786/1‑91 (MQ=255) cTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATgtgt > 2:970310/1‑91 (MQ=255) aaaaaTACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTg < 1:2128183/91‑1 (MQ=255) aaaaTACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTgg > 2:49651/1‑91 (MQ=255) aaaaTACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTgg > 1:699748/1‑91 (MQ=255) aTACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCaa < 2:1975020/91‑1 (MQ=255) cGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACca > 2:153560/1‑91 (MQ=255) cGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACca < 2:1167010/91‑1 (MQ=255) cGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACca > 2:1108157/1‑91 (MQ=255) cGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACca > 2:749906/1‑91 (MQ=255) gtgtgtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACcatc > 1:3437876/1‑91 (MQ=255) gtgtgtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACcatc < 1:112393/91‑1 (MQ=255) tgtgtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACcatca < 2:3833512/91‑1 (MQ=255) tagaaaataataatGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTAGTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACcatca > 1:3428616‑M1/15‑91 (MQ=255) gtgtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACcatcat > 1:259381/1‑91 (MQ=255) tgtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCAtt < 2:2365344/91‑1 (MQ=255) gtAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCAttt > 1:2516652/1‑91 (MQ=255) tAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTg < 1:2510509/91‑1 (MQ=255) tAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTg > 1:1751996/1‑91 (MQ=255) aataataatgccccctacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTgg > 2:1414562‑M2/38‑91 (MQ=255) aataataatgccccctacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTgg > 2:1555651‑M2/38‑91 (MQ=255) gATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGttt < 2:109941/91‑1 (MQ=255) ataatgccccctacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTc > 1:3493574‑M2/34‑91 (MQ=255) ttCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCa > 1:2114829/1‑91 (MQ=255) tgccccctacactaatttagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATa > 2:2184673‑M2/30‑91 (MQ=255) aGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATa > 1:1491018/1‑91 (MQ=255) aGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATa < 1:123970/91‑1 (MQ=255) gccccctacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATAc > 2:1233773‑M2/29‑91 (MQ=255) GCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATAc < 2:3417050‑M1/91‑1 (MQ=255) GCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATAc < 1:1839276‑M1/91‑1 (MQ=255) ccccctacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACa > 2:181590‑M2/28‑91 (MQ=255) CCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACa < 1:397481‑M1/91‑1 (MQ=255) CCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACaa > 2:2314353‑M1/1‑91 (MQ=255) CCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAAt > 1:100511‑M1/1‑91 (MQ=255) CCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAAtt < 1:3790480‑M1/91‑1 (MQ=255) CTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAAttt < 2:720279‑M1/91‑1 (MQ=255) tacactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAAtttt > 2:3200675‑M2/23‑91 (MQ=255) TCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAAtttt < 2:672113‑M1/91‑1 (MQ=255) TCGCTAGATTAGTGTAGGGGGCATTATTAGTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGTTTTCAAGACAAtttt < 2:3433581‑M1/91‑1 (MQ=255) cGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTta < 1:3569707/91‑1 (MQ=255) acactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTta > 2:3120811‑M2/22‑91 (MQ=255) cactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtat > 1:1627227‑M2/21‑91 (MQ=255) cactaatctagcgagggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtat > 2:2631440‑M2/21‑91 (MQ=255) cTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtata > 2:2068589/1‑91 (MQ=255) cTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtata < 2:3091013/91‑1 (MQ=255) cTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtata > 1:2837246/1‑91 (MQ=255) cTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTtata < 2:1492328/91‑1 (MQ=255) tAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATaa > 1:3178014/1‑91 (MQ=255) gATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATc < 1:1578707/91‑1 (MQ=255) gATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATc < 2:577128/91‑1 (MQ=255) aTTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCg > 1:3717003/1‑91 (MQ=255) tgtAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTAtgt < 2:406349/91‑1 (MQ=255) gtAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTAtgtg < 2:19093/91‑1 (MQ=255) gtAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTAtgtg < 2:2678209/91‑1 (MQ=255) gtAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTAtgtg < 2:2678811/91‑1 (MQ=255) agggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGta > 1:92672‑M2/8‑91 (MQ=255) gggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGtat < 2:2082544‑M2/85‑1 (MQ=255) gggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGtat > 1:2543898‑M2/7‑91 (MQ=255) gggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGtat > 1:3055562‑M2/7‑91 (MQ=255) ggggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGtata > 1:965605‑M2/6‑91 (MQ=255) gggcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAg < 2:1050439‑M2/87‑1 (MQ=255) gcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGaa > 2:1962636‑M2/3‑91 (MQ=255) gcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGaa > 1:1386201‑M2/3‑91 (MQ=255) gcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGaa < 1:596945‑M2/89‑1 (MQ=255) gcATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGCGTATAGaa > 2:2771261‑M2/3‑91 (MQ=255) cATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGaaa > 1:1523342‑M2/2‑91 (MQ=255) | AAGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAATGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATTATTATTTTCTATCTTTTGTTAGTTACCATGTGTTTGGCAACCATCATTTGGTTTCAATACAATTTTATAATCGTATGTGTATAGAAAT > USA300TCH1516_ALE/231577‑231757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |