| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 326023 | 194 (0.950) | 22 (0.120) | 11/142 | NT | 11.1% | intergenic (‑27/+41) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 326041 | 181 (1.000) | intergenic (‑45/+23) | USA300HOU_RS01460/USA300HOU_RS01465 | hypothetical protein/hypothetical protein | |||||
Only 100 of 287 total aligned reads displayed.
TCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTCAA > USA300TCH1516_ALE/325951‑326131 | aaaatggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaagtataaaaATAAGATTGAAAGGCAAGATGACCTTcc > 2:2611082‑M1/64‑91 (MQ=255) aTAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaa < 1:2071247‑M2/91‑4 (MQ=255) tggcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATc > 2:436861‑M1/60‑91 (MQ=255) aaaaaGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCcaatct > 2:1257789‑M2/1‑85 (MQ=255) gcggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCtt > 1:459252‑M1/58‑91 (MQ=255) ggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactagaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAt > 2:380976‑M1/56‑91 (MQ=255) ggcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAt > 1:1788849‑M1/56‑91 (MQ=255) gcaaactgtttgaatcaattttaaaaaaggcatctaaatgactaaaatataaagATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt > 1:3677067‑M1/55‑91 (MQ=255) gcaaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt > 1:3925968‑M1/55‑91 (MQ=255) agagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtt < 2:1948755/91‑1 (MQ=255) agagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTCCCAATCTTAtt > 1:3588374/1‑91 (MQ=255) gagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttt > 2:2162086/1‑91 (MQ=255) gagTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttt > 1:12971/1‑91 (MQ=255) agTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 1:911010/1‑91 (MQ=255) aaaatgtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttt > 1:1226778‑M1/53‑91 (MQ=255) aaatgtgtgaatcaattttaaaaaaggcatctaactaactaaaatataacaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAttttt > 1:2566561‑M1/52‑91 (MQ=255) tGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTAtttttt > 2:3620146/1‑90 (MQ=255) tGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTta > 1:2705730/1‑91 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat > 2:1872373/1‑91 (MQ=255) ggTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtat > 1:1635829/1‑91 (MQ=255) gTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtata < 2:1696699/91‑1 (MQ=255) gTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTtata > 2:2527748/1‑91 (MQ=255) tAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTatat > 2:2289690/1‑91 (MQ=255) tAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTatat > 1:1048415/1‑91 (MQ=255) gtttgaatcaattttaaaaaaggcatctaaataactaaaatataaaaATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTatat > 2:3041983‑M1/48‑91 (MQ=255) aGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtt < 1:3727968/91‑1 (MQ=255) aGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtt < 1:2633533/91‑1 (MQ=255) gATGCGAAACAAATGTATTGTTTTCATTTAACCTCTCCTCCAATGATAAGATTGAAAGGTAAGATGACCTTCCAATCTTATTTTTATAttt < 1:3511360/91‑1 (MQ=255) aTGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATAtttt > 1:3125956/1‑91 (MQ=255) tGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTa < 1:517381/91‑1 (MQ=255) cGAATCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTTAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGt < 2:1395369/91‑1 (MQ=255) cGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGt < 1:889464/91‑1 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTa > 2:3863734/1‑91 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTa > 1:118167/1‑91 (MQ=255) aaaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTa < 2:2368042/91‑1 (MQ=255) aaCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTAt < 1:875650/91‑1 (MQ=255) aCAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTAtt > 2:948970/1‑91 (MQ=255) aaaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTa < 1:1600998/91‑1 (MQ=255) aaaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTa > 1:2574564/1‑91 (MQ=255) aaTGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAg < 1:355716/91‑1 (MQ=255) tGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGAt > 2:1938599/1‑91 (MQ=255) tATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGc > 1:2479262/1‑91 (MQ=255) aTTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGcc > 1:1695146/1‑91 (MQ=255) gTTTTCATTTAATCACTCCCCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttt > 1:1495634/1‑91 (MQ=255) ttttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCtttt < 2:2643016/91‑1 (MQ=255) tttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 1:345138/91‑1 (MQ=255) tttCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 1:2335830/91‑1 (MQ=255) tttCATTTAACCACTCCTCCAATCTTAAGATTGAAAGGCAAGACGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCttttt < 2:3682138/91‑1 (MQ=255) cATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaa > 1:2010797/1‑91 (MQ=255) cATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTaa > 1:621552/1‑91 (MQ=255) tAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAAtt < 2:3728128/91‑1 (MQ=255) ccACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTTCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGAt > 1:1826042/1‑91 (MQ=255) ctcctcCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCa > 2:2871008/1‑91 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa < 1:1750939/91‑1 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa > 2:2829123/1‑91 (MQ=255) tcctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaa > 1:3086801/1‑91 (MQ=255) cctccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCaaa < 2:3273815/91‑1 (MQ=255) tccAATGATAAGATTGAGAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa < 2:2938913/91‑1 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 1:3817443/1‑91 (MQ=255) tccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACa > 1:1107624/1‑91 (MQ=255) ccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAt > 1:683610/1‑91 (MQ=255) ccAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAt > 2:1758175/1‑91 (MQ=255) cAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAtt < 2:2258298/91‑1 (MQ=255) aaTGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACAttt > 1:1722476/1‑91 (MQ=255) tGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTTATTCAAACATTTTg > 2:2690237/1‑91 (MQ=255) gATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgc > 1:2681886/1‑91 (MQ=255) gATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgc > 2:1192057/1‑91 (MQ=255) aTAAGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctt < 1:2370713‑M2/91‑65 (MQ=255) ATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgcc < 1:1941399‑M1/91‑1 (MQ=255) TAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccg > 1:2203065‑M1/1‑91 (MQ=255) TAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccg > 1:841151‑M1/1‑91 (MQ=255) AAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgc < 2:1451832‑M1/91‑1 (MQ=255) aGATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttt < 1:1799756‑M2/91‑68 (MQ=255) AGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTgccgcc > 2:3395395‑M1/1‑91 (MQ=255) gATTGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactctttttt < 1:3099369‑M2/91‑69 (MQ=255) GATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCa < 1:2123019‑M1/91‑1 (MQ=255) TTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtt > 1:1660895‑M1/1‑91 (MQ=255) tGAAAGGCAAGATGACCTTCcaatcttatcattggaggagtggttaaatgaaaacaatacatttgtttcgcatctaccactcttttttatt < 1:762964‑M2/91‑72 (MQ=255) GAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtttt > 1:3305646‑M1/1‑91 (MQ=255) GAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtttt < 1:1032379‑M1/91‑1 (MQ=255) GAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtttt < 1:3225348‑M1/91‑1 (MQ=255) aaaGGCAAGATGACCTTCCAATCTTATTTTTATATTTGAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAttttt < 2:1135024/91‑1 (MQ=255) aaGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAtttttt < 1:2788862/91‑1 (MQ=255) ggCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTc > 1:980966/1‑91 (MQ=255) ggCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTc < 1:2954049/91‑1 (MQ=255) ggCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTc < 1:2696138/91‑1 (MQ=255) gCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCAGTTTTTTCg > 2:1576168/1‑91 (MQ=255) cAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGa < 1:1434360/91‑1 (MQ=255) cAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGa < 2:2798711/91‑1 (MQ=255) cAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGa > 2:1017411/1‑91 (MQ=255) aGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGAtt > 1:3846941/1‑91 (MQ=255) gATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGAttt < 2:1499601/91‑1 (MQ=255) aTGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGAtttt > 2:591533/1‑90 (MQ=255) gccTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAATATTGTTTCAATCATTTTGCCGCCATTTTTTTCGATTTCttt < 2:2132226/90‑1 (MQ=255) aCCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATCTTTTTCGATTTCttt > 2:324663/1‑91 (MQ=255) cTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCttttt < 2:2429718/91‑1 (MQ=255) ttCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTc < 1:328217/91‑1 (MQ=255) ccAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTCaa < 1:1516753/91‑1 (MQ=255) ccAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTCaa < 2:523043/91‑1 (MQ=255) ccAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTCaa < 2:1626395/91‑1 (MQ=255) | TCAATAAAAAAGAGTGGTAGATGCGAAACAAATGTATTGTTTTCATTTAACCACTCCTCCAATGATAAGATTGAAAGGCAAGATGACCTTCCAATCTTATTTTTATATTTTAGTTATTTAGATGCCTTTTTTAAAATTGATTCAAACATTTTGCCGCCATTTTTTTCGATTTCTTTTTCAA > USA300TCH1516_ALE/325951‑326131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |