BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	598632 =	108 (0.530)	10 (0.060)	5/124	NT	9.3%	intergenic (+181/+101)	tuf/yxeP_2	Elongation factor Tu/putative hydrolase YxeP
*	?	USA300TCH1516_ALE	598687 =	112 (0.710)	10 (0.060)	5/124	NT	9.3%	intergenic (+236/+46)	tuf/yxeP_2	Elongation factor Tu/putative hydrolase YxeP

Only 100 of 214 total aligned reads displayed.

GTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTAAAAA  >  USA300TCH1516_ALE/598598‑598777

gTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCa                                                                                           <  1:73715/91‑1 (MQ=255)

gTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTCTTCAATGTCTACTTTGAAGGGAGCATTTCa                                                                                           <  1:3775068/91‑1 (MQ=255)

 tttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAt                                                                                          <  2:3625353/91‑1 (MQ=255)

  ttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAtt                                                                                         <  1:729834/91‑1 (MQ=255)

   taaatgaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTa                                                                                        <  2:3205963/91‑1 (MQ=255)

    aaataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAg                                                                                       >  2:1726116/1‑91 (MQ=255)

    aaataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAg                                                                                       <  1:1799851/91‑1 (MQ=255)

    aaataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCATTCAAAGTTTTCATTTTTTTCATTTCTACTTTGAAGGGAGCATTTCATTAg                                                                                       >  2:1941116/1‑91 (MQ=37)

     aataagATTGTTGAGTCTTGGACATGGTAAAATGCTCCCGTCAAAGTTTTCATGTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt                                                                                      <  1:3672537/91‑1 (MQ=37)

     aataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTTTATGTCTACTTTGAAGGGAGCATTTCATTAGt                                                                                      >  2:2416401/1‑91 (MQ=255)

     aataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt                                                                                      <  1:2489885/91‑1 (MQ=255)

     aataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt                                                                                      <  1:3303403/91‑1 (MQ=255)

      ataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGtt                                                                                     <  1:1666882/91‑1 (MQ=255)

      ataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGtt                                                                                     <  1:2746460/91‑1 (MQ=255)

      ataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGtt                                                                                     <  2:839042/91‑1 (MQ=255)

          aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg                                                                                 >  2:915619/1‑91 (MQ=255)

          aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTCCATTAGTTTATg                                                                                 >  2:3286762/1‑91 (MQ=255)

          aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTCTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg                                                                                 >  2:3482274/1‑91 (MQ=255)

           aTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGt                                                                                <  1:2473879/91‑1 (MQ=255)

             tgttgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtct                                                                              <  1:3646130/91‑1 (MQ=255)

               ttgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCa                                                                            >  2:1635237/1‑91 (MQ=255)

                tgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAg                                                                           >  2:3935867/1‑91 (MQ=255)

                   gTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGAtt                                                                        >  1:598680/1‑91 (MQ=255)

                    tCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTc                                                                       <  1:3940347/91‑1 (MQ=255)

                    tCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTc                                                                       >  1:1036861/1‑91 (MQ=255)

                     cTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCa                                                                      <  1:3517158/91‑1 (MQ=255)

                     cTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCa                                                                      <  1:1164694/91‑1 (MQ=255)

                     cTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCAGTTCATTAGTTTATGTCTCAGATTCa                                                                      >  1:3684425/1‑91 (MQ=255)

                      ttGGTCATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCat                                                                     <  1:3286677/91‑1 (MQ=255)

                      ttGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCat                                                                     <  1:1538863/91‑1 (MQ=255)

                        ggACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCCCAGATTCatat                                                                   >  1:510901/1‑91 (MQ=255)

                          ataTTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCt                                                                 <  2:807891/89‑1 (MQ=255)

                          aCATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCt                                                                 >  2:3302751/1‑91 (MQ=255)

                           cATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCtt                                                                <  2:2676322/91‑1 (MQ=255)

                             ttGTAAATTTCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCATATTCATATCTTTc                                                              <  2:581245/91‑1 (MQ=255)

                             ttGTAAAATGCTCCCTTCAAAGTTTTCCTTTTTTCAATGTCTACTTCGAAGGGAGCATTTCATTAGTCTATGTCTCAGCTTCCTATCttcc                                                              >  2:1313805/1‑89 (MQ=21)

                                tAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaat                                                           <  2:622804/91‑1 (MQ=255)

                                 aaaaTGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaatt                                                          >  1:313359/1‑91 (MQ=255)

                                  AAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaatta                                                         <  2:2042187‑M1/91‑1 (MQ=255)

                                   AATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaattaa                                                        >  2:92398‑M1/1‑91 (MQ=255)

                                    ATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaattaat                                                       <  1:2911464‑M1/91‑1 (MQ=255)

                                          CCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAAt                                                 <  2:1980658‑M1/91‑1 (MQ=255)

                                           CTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATg                                                >  1:2728964‑M1/1‑91 (MQ=255)

                                             TCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTATTTTATGTCTCAGATTCATATCTTTCAATTAATTAAAATGCt                                              >  2:3003697‑M1/1‑91 (MQ=255)

                                                aagtagacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTaa                                           >  1:981805‑M2/42‑91 (MQ=255)

                                                AAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTaa                                           >  2:2817892‑M1/1‑91 (MQ=255)

                                                 agtagacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAt                                          >  1:1004131‑M2/41‑91 (MQ=255)

                                                 agtagacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAt                                          >  1:3012572‑M2/41‑91 (MQ=255)

                                                 AGTTTTCATTTTTTCAATGTCTCCTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTACATGCTTAAt                                          <  2:294313‑M1/91‑1 (MQ=255)

                                                 AGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTCTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAt                                          <  1:3959693‑M1/91‑1 (MQ=255)

                                                  gtagacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAtt                                         >  1:179416‑M2/40‑91 (MQ=255)

                                                  GTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTTATTCGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAtt                                         <  2:1089442‑M1/91‑1 (MQ=255)

                                                   tagacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAttt                                        >  2:472485‑M2/39‑91 (MQ=255)

                                                    tttCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTg                                       >  1:2133973/1‑91 (MQ=255)

                                                     ttCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGt                                      <  2:3647284/91‑1 (MQ=255)

                                                     ttCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGt                                      >  2:754736/1‑91 (MQ=255)

                                                     gacattgaaaaaatgaaaactttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGt                                      >  1:3842045‑M2/37‑91 (MQ=255)

                                                      tCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGtt                                     >  2:1600810/1‑91 (MQ=255)

                                                       cATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGttt                                    >  2:2524587/1‑91 (MQ=255)

                                                       cATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGttt                                    >  2:2140974/1‑91 (MQ=255)

                                                        aTTTTTTCTATGTCTACTTTGAAGGGAGCATTTCATTAGTTTAGGTCTCAGATTAATATCTTTCAATTAATTTAAATGCTTAATTTGtttt                                   <  2:3916432/91‑1 (MQ=255)

                                                        aTTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGtttt                                   >  1:3489441/1‑91 (MQ=255)

                                                        aTTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGtttt                                   <  1:873764/91‑1 (MQ=255)

                                                         ttttttCGATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTa                                  <  2:1203401/91‑1 (MQ=255)

                                                         ttttttCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTa                                  <  2:3346782/91‑1 (MQ=255)

                                                           ttttCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTaaa                                >  1:803557/1‑91 (MQ=255)

                                                           ttttCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTaaa                                <  2:396371/91‑1 (MQ=255)

                                                            tttCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAAt                               <  1:1210148/91‑1 (MQ=255)

                                                            tttCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAAt                               <  2:270112/91‑1 (MQ=255)

                                                               cAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACt                            >  1:1747653/1‑91 (MQ=255)

                                                                aaTGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACtt                           <  1:3806900/91‑1 (MQ=255)

                                                                aaTGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACtt                           <  1:130769/91‑1 (MQ=255)

                                                                 aTGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTg                          >  1:3869524/1‑91 (MQ=255)

                                                                 aTGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTg                          >  1:2234377/1‑91 (MQ=255)

                                                                 aTGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTg                          >  1:2689442/1‑91 (MQ=255)

                                                                  tGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGc                         >  1:541938/1‑91 (MQ=255)

                                                                   gTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTATTTTAAATGCTTAATTTGTTTTAAATACTTGct                        <  2:3887238/91‑1 (MQ=255)

                                                                   gTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGct                        <  1:646625/91‑1 (MQ=255)

                                                                   gTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGct                        <  1:2619871/91‑1 (MQ=255)

                                                                   gTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGct                        <  2:1537590/91‑1 (MQ=255)

                                                                    tCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGctc                       <  1:1294241/91‑1 (MQ=255)

                                                                    tCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGctc                       <  2:2984189/91‑1 (MQ=255)

                                                                    tCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGctc                       <  1:3397195/91‑1 (MQ=255)

                                                                     cTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGctct                      >  2:375997/1‑91 (MQ=255)

                                                                     cTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGctct                      <  2:3414948/91‑1 (MQ=255)

                                                                       actttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTaa                    <  2:2382543‑M2/73‑1 (MQ=255)

                                                                        ctttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACttgctctttt                   >  2:1883233‑M2/18‑88 (MQ=255)

                                                                         tttgaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAAtt                  >  1:1095248‑M2/17‑91 (MQ=255)

                                                                            gaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTa               >  1:2010170‑M2/14‑91 (MQ=255)

                                                                            gaagggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTa               >  1:958518‑M2/14‑91 (MQ=255)

                                                                               gggagcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACGTGCTCTAATTCTATGa            >  2:3032263‑M2/11‑91 (MQ=255)

                                                                                  agcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGAttt         >  1:49166‑M2/8‑91 (MQ=255)

                                                                                  agcatttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGAttt         >  2:2021435‑M2/8‑91 (MQ=255)

                                                                                  aGCATTGCATTAGCTTATGTCTCAGCTACATAACTTTCCAGTAATTTCAATGCTTAATTCGCATTAAATACTTGCTCTCATACTATgctct         >  2:2293228/1‑87 (MQ=255)

                                                                                   gcatttCATTAGTTTATGTCTCAGATTCACATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGAtttt        <  1:3179226‑M2/85‑1 (MQ=255)

                                                                                    catttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGAttttt       >  2:1272841‑M2/6‑91 (MQ=255)

                                                                                      tttCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTaa     >  2:2185112‑M2/4‑91 (MQ=255)

                                                                                        tCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTaaaa   >  2:2098653‑M2/2‑91 (MQ=255)

                                                                                         cATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTACATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTaaaaa  >  1:3417418/1‑91 (MQ=255)

                                                                                         cATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTaaaaa  <  2:627222/91‑1 (MQ=255)

GTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTTGTTTTAAATACTTGCTCTAATTCTATGATTTTTAAAAA  >  USA300TCH1516_ALE/598598‑598777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.