BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 630624	231 (1.130)	20 (0.100)	10/154	NT	7.9%	intergenic (+10/‑103)	hxlB/gph_1	3‑hexulose‑6‑phosphate isomerase/Phosphoglycolate phosphatase
*	?	USA300TCH1516_ALE	= 630661	245 (1.250)	20 (0.100)	10/154	NT	7.9%	intergenic (+47/‑66)	hxlB/gph_1	3‑hexulose‑6‑phosphate isomerase/Phosphoglycolate phosphatase

Only 100 of 312 total aligned reads displayed.

TTACGGAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATATTTTTG  >  USA300TCH1516_ALE/630571‑630751

ttACGGAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGat                                                                                            >  1:2540505/1‑91 (MQ=255)

   cGGAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATtat                                                                                         >  2:3742013‑M2/1‑88 (MQ=255)

    ggAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGattatt                                                                                        <  2:2742433/91‑1 (MQ=255)

    ggAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGattatt                                                                                        <  1:610116/91‑1 (MQ=255)

     gAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTAttt                                                                                       >  2:632614/1‑91 (MQ=255)

       aCAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTAttttt                                                                                     <  2:1191753/91‑1 (MQ=255)

        cAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTAtttttt                                                                                    >  2:53168/1‑91 (MQ=255)

        cAAACGATGCAACAAAATCATGCTAATGTAGAATAAAATAAAGAGAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTAtttttt                                                                                    <  1:1894998/91‑1 (MQ=255)

          aaCGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTttta                                                                                  >  1:801151/1‑91 (MQ=255)

           aCGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttat                                                                                 >  1:2080243/1‑91 (MQ=255)

            cGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttatt                                                                                >  2:2903881/1‑91 (MQ=255)

             gATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattt                                                                               >  1:3402133/1‑91 (MQ=255)

             gATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattt                                                                               <  2:1728408/91‑1 (MQ=255)

             gATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattt                                                                               >  1:2763504/1‑91 (MQ=255)

             gATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattt                                                                               >  1:2256309/1‑91 (MQ=255)

             gATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATAGATTATTTTtttattt                                                                               >  2:3774374/1‑91 (MQ=255)

              aTGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattta                                                                              <  2:3851932/91‑1 (MQ=255)

              aTGCAACAAAAGCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTtttattta                                                                              <  2:479498/91‑1 (MQ=255)

                gCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTaaa                                                                            >  2:391151/1‑91 (MQ=255)

                 caacaaAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAaat                                                                           >  2:362035/1‑91 (MQ=255)

                   acaaAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAaataa                                                                         <  2:1999176/91‑1 (MQ=255)

                    caaAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAaataat                                                                        >  1:3746341/1‑91 (MQ=255)

                      aaaTCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTAACGATTATTTTGTTATTTAAAtaataa                                                                      >  2:3424583/1‑91 (MQ=255)

                        aTCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAAt                                                                    <  2:3339075/91‑1 (MQ=255)

                          cATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATta                                                                  >  2:320022/1‑91 (MQ=255)

                          cATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATta                                                                  >  2:2669601/1‑91 (MQ=255)

                           aTGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATtat                                                                 >  2:2197790/1‑91 (MQ=255)

                           aTGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATtat                                                                 >  1:768522/1‑91 (MQ=255)

                           aTGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATtat                                                                 >  1:1221383/1‑91 (MQ=255)

                             gCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAg                                                               <  2:910533/91‑1 (MQ=255)

                             gCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAg                                                               <  2:885449/91‑1 (MQ=255)

                             gCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAg                                                               >  1:1592263/1‑91 (MQ=255)

                             gCTAATTTAAAATAAAATAAAAATAGTCGATAATATGATGGATAGGCAGATATATTATCGATTATTTTTTTATTTAAATAATAAATTATAg                                                               <  2:248458/91‑1 (MQ=255)

                              cTAATTTAGAATAAAATAAAGATAGTCGATAATATGAAGCCTAGGCAGAAAGATTATCGATTATTGTTTTATTTAAATAATAAATGATAGt                                                              >  1:3679314/1‑91 (MQ=255)

                                aaTTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGtat                                                            >  2:2555600/1‑91 (MQ=255)

                                   ttAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTataat                                                         <  1:3635987/91‑1 (MQ=255)

                                    tAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTataata                                                        <  2:872181/91‑1 (MQ=255)

                                      gAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATc                                                      <  1:3350218/91‑1 (MQ=255)

                                      gAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATc                                                      >  2:3380875/1‑91 (MQ=255)

                                       aataaaataaAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCa                                                     >  1:2557563/1‑91 (MQ=255)

                                        ataaaataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCaa                                                    >  2:2111019/1‑91 (MQ=255)

                                         taaaataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCaat                                                   <  1:2707570/91‑1 (MQ=255)

                                            aataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCaataat                                                <  1:1779103/91‑1 (MQ=255)

                                            aataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCaataat                                                <  1:2338343/91‑1 (MQ=255)

                                             ataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAataata                                               <  1:1336793/91‑1 (MQ=255)

                                             ataaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAataata                                               >  1:309596/1‑91 (MQ=255)

                                              taaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAAtaataa                                              >  2:3695451/1‑91 (MQ=255)

                                               aaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgt                                             <  1:646380‑M2/91‑48 (MQ=255)

                                               aaaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATaaa                                             <  1:1009986/91‑1 (MQ=255)

                                                aaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgtt                                            <  2:2075827‑M2/91‑49 (MQ=255)

                                                aaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAAc                                            <  1:3944402/91‑1 (MQ=255)

                                                aaGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAAGTATAGTATAATATCAATAATAAAc                                            <  2:1787130/91‑1 (MQ=255)

                                                 aGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACg                                           <  1:3155421/91‑1 (MQ=255)

                                                  gATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGa                                          >  1:3285104/1‑91 (MQ=255)

                                                   aTAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGaa                                         <  2:1385189/91‑1 (MQ=255)

                                                   aTAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGaa                                         <  2:804328/91‑1 (MQ=255)

                                                   aTAGTCGATAATATGATACCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGaa                                         >  2:1459760/1‑91 (MQ=255)

                                                    tAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAAt                                        >  1:3887399/1‑91 (MQ=255)

                                                     aGTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgta                                       <  1:2136885‑M2/91‑54 (MQ=255)

                                                     aGTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgta                                       <  1:2934784‑M2/91‑54 (MQ=255)

                                                      gTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgtaa                                      <  1:2185553‑M2/91‑55 (MQ=255)

                                                      gTCGATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgtaa                                      <  1:435911‑M2/91‑55 (MQ=255)

                                                       tCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAgg                                     <  1:557762/91‑1 (MQ=255)

                                                       tCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAAGTATAGTATAATATCAATAATAAACGAATAgg                                     <  1:3516370/91‑1 (MQ=255)

                                                        cGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAggg                                    <  1:2593287/91‑1 (MQ=255)

                                                         gATAATATGATGCCTAGGCAGAAATATTATCGATtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgtaacat                                   <  1:3303848‑M2/91‑58 (MQ=255)

                                                         gATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAgggg                                   >  2:2142570/1‑91 (MQ=255)

                                                           taataTGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGgtg                                 >  1:2814311/1‑91 (MQ=255)

                                                             atatGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGtt                               <  1:1413878/91‑1 (MQ=255)

                                                             atatGATGCCTAGGCAGAAATATGATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGtt                               <  2:2691221/91‑1 (MQ=255)

                                                                tgatgCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAat                            >  2:2274399/1‑91 (MQ=255)

                                                                tgatgCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAat                            >  2:1871863/1‑91 (MQ=255)

                                                                tgatgCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAACAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAat                            >  2:2359173/1‑91 (MQ=255)

                                                                tgatgCCTAGGCAGAAATATTATCGACtatctttattttattctaaattagcatgattttgttgcatcgtttgttccgtaacattcatttc                            <  2:1649582‑M2/91‑65 (MQ=255)

                                                                   tgCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATAtt                         <  2:1071448/91‑1 (MQ=255)

                                                                   tgCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATAtt                         >  2:754309/1‑91 (MQ=255)

                                                                    gCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTg                        <  2:2889569/91‑1 (MQ=255)

                                                                    gCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTg                        <  1:1075386/91‑1 (MQ=255)

                                                                       tAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAg                     >  2:3166469/1‑91 (MQ=255)

                                                                        aGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGt                    <  1:48154/91‑1 (MQ=255)

                                                                          gCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGttt                  >  2:3300868/1‑91 (MQ=255)

                                                                          gCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGttt                  >  1:1690808/1‑91 (MQ=255)

                                                                          gCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGttt                  >  1:2865426/1‑91 (MQ=255)

                                                                            aGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGa                <  2:3128046/91‑1 (MQ=255)

                                                                             gAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGAc               >  2:2295685/1‑91 (MQ=255)

                                                                              aaaTATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACa              <  1:2973106/91‑1 (MQ=255)

                                                                              aaaTATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACa              <  1:111041/91‑1 (MQ=255)

                                                                               aaTATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACaa             >  1:1158876/1‑91 (MQ=255)

                                                                               aaTATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACaa             <  1:3927240/91‑1 (MQ=255)

                                                                               aaTATTATCGATTATTTTTTTATTT‑TTTTATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAAt            >  2:3764152/1‑91 (MQ=255)

                                                                                 tattatCGATTATTTTTTTTTTTTTTTTTTAAATTAAAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAAtt           >  2:1860489/1‑91 (MQ=255)

                                                                                  attatCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATta          <  2:280897/91‑1 (MQ=255)

                                                                                   ttatCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATTAACGAATATGGTTGTTAATATTGTAGTTTTATAAtttt         >  2:3762192/1‑89 (MQ=255)

                                                                                   ttatCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATtat         >  1:3197750/1‑91 (MQ=255)

                                                                                   ttatCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATtat         <  1:976971/91‑1 (MQ=255)

                                                                                   ttatCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATtat         >  2:2467703/1‑91 (MQ=255)

                                                                                       cGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATAttt     <  1:2008956/91‑1 (MQ=255)

                                                                                        gATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATAtttt    <  1:147412/91‑1 (MQ=255)

                                                                                        gATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATAtttt    <  2:68572/91‑1 (MQ=255)

                                                                                          ttattTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATATttttg  <  2:1573394/91‑1 (MQ=255)

TTACGGAACAAACGATGCAACAAAATCATGCTAATTTAGAATAAAATAAAGATAGTCGATAATATGATGCCTAGGCAGAAATATTATCGATTATTTTTTTATTTAAATAATAAATTATAGTATAATATCAATAATAAACGAATAGGGGTGTTAATATTGAAGTTTGACAATTATATTTTTG  >  USA300TCH1516_ALE/630571‑630751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.