| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 906243 = | 220 (1.080) | 17 (0.090) | 7/148 | NT | 7.9% | intergenic (+27/‑157) | USA300HOU_RS04485/USA300HOU_RS04490 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 906294 = | 191 (1.010) | intergenic (+78/‑106) | USA300HOU_RS04485/USA300HOU_RS04490 | hypothetical protein/hypothetical protein | |||||
Only 100 of 299 total aligned reads displayed.
TAATATTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGATATG > USA300TCH1516_ALE/906204‑906384 | tAATATTAAAGAAAAAAATTATTAAGATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGcc < 2:837652/91‑1 (MQ=255) aaTATTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGccc > 1:1536498/1‑91 (MQ=255) aaTATTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGccc > 1:1778558/1‑91 (MQ=255) aaTATTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTATTTTCGCCGGGTACCGGCGGGGGccc > 2:3895351/1‑91 (MQ=255) ccctttcataaaagtttatccgcgttgcaagcgaaggGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCt > 1:401693‑M1/38‑91 (MQ=255) tatTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCtt > 1:3852777/1‑91 (MQ=255) atTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTc > 1:2000584/1‑91 (MQ=255) taaataaaAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGc < 1:448349/91‑1 (MQ=255) aaataaaAAAATTATCTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCt < 1:3578592/91‑1 (MQ=255) aaaaaaaTTATTTAAATAGAATTTTATAGCCCCCTGCCCAGCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCa < 2:285044/91‑1 (MQ=255) aaaaaaTTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGCACCGGCGGCGGCCCGTCGCTTGcta > 2:1955132/1‑89 (MQ=14) aaaaaTTATTTAAATAAAATTTTATAGCCACCTGCCCATCGGCTTAAAATGTTTTTTTGCCGGGTACCGGTGGGGGCCCTTCGATTTCAAc > 2:3515573/1‑91 (MQ=14) aaaTTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAAcgc < 1:274741/91‑1 (MQ=40) aaTTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAAcgcg > 1:2314698/1‑91 (MQ=39) attattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCgg > 1:1589068/1‑91 (MQ=38) attattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCgg < 2:1750297/91‑1 (MQ=38) attattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCgg > 1:1743126/1‑91 (MQ=38) ttattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGa > 2:3062827/1‑91 (MQ=37) ttattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGa < 1:892638/91‑1 (MQ=37) ttattTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTATTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGa < 2:3644291/91‑1 (MQ=255) attTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATa < 1:2131351/91‑1 (MQ=34) tttAAATAAAATTTTATAG‑CCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCCGGTACCGGCGGGGGCCCTTCGCTTGCATCGCGGATaaa > 2:641011/1‑91 (MQ=11) ttAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATaaa < 2:3388673/91‑1 (MQ=34) aaataaaATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACt < 2:2043775/91‑1 (MQ=33) ataaaATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACttt > 1:393129/1‑91 (MQ=34) aaaaTTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTa < 2:1212373/91‑1 (MQ=33) aaaaTTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTa < 1:2830182/91‑1 (MQ=33) aaaTTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTAt > 2:2656209/1‑91 (MQ=33) aaTTTTATAGCCCCCTGCCCATCGGCTTAAAATGCTTTTTAGCCGGGTACCGGCGGCCGCCCTTCTATTGCAACGCAGATAAACTCTCATg > 2:3679879/1‑91 (MQ=11) ttttATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGACGGGTACCGGCCGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGaa > 2:3245244/1‑91 (MQ=255) tttATAGCCCCATGCCCATCGGCTTAAAATGTTTTTTCCCCTGTTTACCCCGGGGGCCCCTCCCTTTCATCCCGTTTAAACTTTtgtgcca > 2:2153440/1‑88 (MQ=2) ttATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAg > 1:1063567/1‑91 (MQ=33) taGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAgggg > 2:1316351/1‑91 (MQ=34) aGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAggggg < 2:3135863/91‑1 (MQ=34) aGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAggggg < 1:320123/91‑1 (MQ=33) aGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAggggg < 1:792584/91‑1 (MQ=34) aGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAggggg > 1:1891850/1‑91 (MQ=34) GCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGa > 1:1855093‑M1/1‑91 (MQ=255) GCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGa > 1:3836398‑M1/1‑91 (MQ=255) GCCCCCTGCCCATCGGCTTAAAATGTTTTTTAGCCGGGTACAGGCGGGGGCCCTTCGCTTGCAACGCACATAAACTTTTATGAAAGGGGGa < 2:3008675‑M1/91‑1 (MQ=255) GCCCCCGGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGa > 2:1069946‑M1/1‑91 (MQ=255) CCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGAt < 1:2988507‑M1/91‑1 (MQ=255) CCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATa > 1:973549‑M1/1‑91 (MQ=255) CCTGCCCATCGGCTTAAAATGTTTTTTTTCCGTGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGatacc < 2:1882448‑M1/91‑3 (MQ=255) CTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACt > 1:2174774‑M1/1‑91 (MQ=255) gCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATaaatca < 1:3601475/91‑5 (MQ=255) gCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATaaatca < 2:3470097/91‑5 (MQ=255) gCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATaaatca < 1:3384638/91‑5 (MQ=255) gCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATaaatca < 1:27435/91‑5 (MQ=255) gCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTg > 1:1311623/1‑91 (MQ=255) cccATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGa > 1:111263/1‑91 (MQ=255) ggtacccggcgaaaaaacattttaagccgatgggcagggggcCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAt > 1:3903373‑M2/43‑91 (MQ=255) gtacccggcgaaaaaacattttaagccgatgggcagggggcCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGatg > 2:3938229‑M2/42‑90 (MQ=255) gtacccggcgaaaaaacattttaagccgatgggcagggggcCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAtt > 2:773205‑M2/42‑91 (MQ=255) cATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAtt > 2:2724252/1‑91 (MQ=255) cATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAtt > 1:3655565/1‑91 (MQ=255) aTCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAttt > 1:50976/1‑91 (MQ=255) aTCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGAttt < 1:597589/91‑1 (MQ=255) tCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTa > 1:1654380/1‑91 (MQ=255) cGGCTTAAACTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTTCAACGCGGACAAACTTTTATGAAGGGGGGATAACTCGATTTAt > 1:1972637/1‑91 (MQ=14) cGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTAt > 1:1723676/1‑91 (MQ=255) ggCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATc < 1:157948/91‑1 (MQ=255) ggCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATc < 2:1702746/91‑1 (MQ=255) gCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATcc < 1:1424405/91‑1 (MQ=255) ttAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCt > 1:2266715/1‑91 (MQ=255) tAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCtt < 1:2952812/91‑1 (MQ=255) aaaaTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTT < 2:2889787‑M1/91‑1 (MQ=255) aaaaTGGTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTT < 2:2779274‑M1/91‑1 (MQ=255) aaaTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTT > 2:2440521‑M1/1‑91 (MQ=255) aaTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTT < 1:3919173‑M1/91‑1 (MQ=255) aaTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTT > 2:2520175‑M1/1‑91 (MQ=255) aTGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTC < 1:3303757‑M1/91‑1 (MQ=255) ttttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGa < 1:3762351/91‑1 (MQ=255) ttttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCCTTTTCAGa > 1:3497894/1‑91 (MQ=255) ttttttCGCCGGGTACCGGCGGGGGCCCGTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCGTTTTCAGa < 2:431926/91‑1 (MQ=255) tttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGAt < 1:2575021/91‑1 (MQ=255) ttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATa < 1:1270664/91‑1 (MQ=255) ttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATa < 1:2665226/91‑1 (MQ=255) ttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATa < 2:3369693/91‑1 (MQ=255) ttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATa < 2:1515040/91‑1 (MQ=255) ttttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGAAAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATa < 2:2560685/91‑1 (MQ=255) ttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACt < 2:2698655/91‑1 (MQ=255) ttCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACt > 2:201477/1‑91 (MQ=255) tCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACtt < 2:3732146/91‑1 (MQ=255) ccGGGTACCGGCGGGGGCCCTTCGCGTGCAACGCGGATATACTTTTATGAAAGAGGGATAACTTGATTTATCCCTTTTTCAGATACTtata < 1:3678965/91‑1 (MQ=255) cGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATaa > 1:3219875/1‑91 (MQ=255) gggTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATaaa > 1:3525558/1‑91 (MQ=255) ggTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAat < 2:901300/91‑1 (MQ=255) gTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAata < 2:1609687/91‑1 (MQ=255) tACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAatat < 2:557370/91‑1 (MQ=255) acccGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAatat > 1:1006513/3‑91 (MQ=255) cccGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATAtt > 1:1839650/2‑91 (MQ=255) aCCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATAtt > 2:2496899/1‑91 (MQ=255) gcggGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAAt > 1:3009597/1‑91 (MQ=255) ggggcCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCg > 1:3081183‑M2/6‑91 (MQ=255) gcCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGata < 1:706112‑M2/89‑1 (MQ=255) cCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGatat > 1:1233360‑M2/2‑91 (MQ=255) cCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGatat > 1:2002873‑M2/2‑91 (MQ=255) cCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGatat < 1:2430004‑M2/90‑1 (MQ=255) ccTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGATATg < 2:2490754/91‑1 (MQ=255) | TAATATTAAATAAAAAAATTATTTAAATAAAATTTTATAGCCCCCTGCCCATCGGCTTAAAATGTTTTTTCGCCGGGTACCGGCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGGATAACTTGATTTATCCCTTTTTCAGATACTTATAAATATTAAATTCGATATG > USA300TCH1516_ALE/906204‑906384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |