| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 920377 = | 124 (0.610) | 12 (0.070) | 7/132 | NT | 9.7% | intergenic (+6/‑207) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein |
| ? | USA300TCH1516_ALE | 920443 = | 121 (0.720) | intergenic (+72/‑141) | USA300HOU_RS04555/USA300HOU_RS04565 | Putative monooxygenase/hypothetical protein | |||||
Only 100 of 202 total aligned reads displayed.
AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 | aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt < 1:3811355/91‑1 (MQ=255)aatcaTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGt > 1:2408183/1‑91 (MQ=255) caTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc > 2:2374718/1‑91 (MQ=255) aTGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt > 2:1880508/1‑91 (MQ=255) tGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTa > 1:1275917/1‑91 (MQ=255) tGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTa > 2:1557826/1‑91 (MQ=255) gCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt > 2:2238421/1‑91 (MQ=255) cAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGCTTGCGTTTCTAtt > 1:2218124/1‑91 (MQ=255) cAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtt < 1:1873453/91‑1 (MQ=255) aaTATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAGCATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAttt < 1:2621165/91‑1 (MQ=255) atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt < 2:1382162/91‑1 (MQ=255) atatAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAtttt > 2:2274725/1‑91 (MQ=255) taaataaTCGACCGCAATCCACAAAAGCACAATCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAcc > 2:3876758/1‑91 (MQ=255) taaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTAcc < 2:190250/91‑1 (MQ=255) aaataaTCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCa > 2:2843840/1‑91 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt < 1:2057779/91‑1 (MQ=255) ataatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt > 2:3217952/1‑91 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCACACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAttt < 2:3910158/91‑1 (MQ=255) aatCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTATGTCGATTGCGTTTCTGTTTTACCCAttt > 2:35855/1‑91 (MQ=255) gACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATc < 1:1782479/91‑1 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa > 2:2925942/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa > 2:1470787/1‑91 (MQ=255) ccGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaa > 2:1008259/1‑91 (MQ=255) CGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaaa < 1:2027336‑M1/91‑1 (MQ=255) CAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACg < 2:786594‑M1/91‑1 (MQ=255) AATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGa > 2:679646‑M1/1‑91 (MQ=255) TCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGaaa > 1:3042870‑M1/1‑91 (MQ=255) CACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAAc < 1:3424493‑M1/91‑1 (MQ=255) acaaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACa > 1:3561727‑M2/59‑91 (MQ=255) ACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa < 2:1146153‑M1/91‑1 (MQ=255) aaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATc > 2:879040‑M2/57‑91 (MQ=255) aaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATc > 2:3156670‑M2/57‑91 (MQ=255) aaaaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATc > 1:367851‑M2/57‑91 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa < 2:2011116‑M1/91‑1 (MQ=255) AAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa > 2:1164275‑M1/1‑91 (MQ=255) aaatggcaagcactaaaataatgtttgggggagcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAACCAAACGAAAACATCaa > 2:3027181‑M2/55‑91 (MQ=255) AAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa < 1:3013239‑M1/91‑1 (MQ=255) AAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCaa < 2:2441554‑M1/91‑1 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc > 2:1342322/1‑91 (MQ=255) gcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc < 2:524198/91‑1 (MQ=255) atggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGc > 1:1526320‑M2/53‑91 (MQ=255) ggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg > 1:1911836‑M2/51‑91 (MQ=255) acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg > 1:1659796/1‑91 (MQ=255) acaagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTg > 1:2530482/1‑91 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 1:2604787/1‑91 (MQ=255) caagcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGa > 1:1257880/1‑91 (MQ=255) agcacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAg > 2:1686385/1‑91 (MQ=255) gcacCCCCAATCATTATTTTAGTGCTTGCCATGTTTGTGGATTGCGCTTCTATTTTACCAATTTAATCAAACGAAATCGTCAAGCTGAAGa < 2:184425/91‑1 (MQ=255) cacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt > 2:1959396/1‑91 (MQ=255) cacCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt > 2:1189261/1‑91 (MQ=255) cccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg > 1:2845281/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 2:2280093/1‑91 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc < 2:1218252/91‑1 (MQ=255) ccccAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc > 2:203378/1‑91 (MQ=255) cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGa < 2:971758/91‑1 (MQ=255) cAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGa < 1:2735965/91‑1 (MQ=255) cATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa > 2:2619585/1‑91 (MQ=255) cATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa < 1:328362/91‑1 (MQ=255) cATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa > 2:3466694/1‑91 (MQ=255) attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt < 1:800974/91‑1 (MQ=255) attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt < 1:2689530/91‑1 (MQ=255) attattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAt < 1:1401505/91‑1 (MQ=255) tattTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt < 1:624148/91‑1 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 2:3405518/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 1:314816/1‑91 (MQ=255) attTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAtttt > 2:781573/1‑91 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa > 1:1048781/1‑91 (MQ=255) ttttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTa > 2:2120856/1‑91 (MQ=255) tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTaa > 2:1594361/1‑91 (MQ=255) tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTaa > 2:596731/1‑91 (MQ=255) tttAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTaa > 2:543080/1‑91 (MQ=255) tAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATc < 1:3136742/91‑1 (MQ=255) tAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATc < 1:1113411/91‑1 (MQ=255) gTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCaa > 2:1454710/1‑91 (MQ=255) gTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCaa > 1:1684593/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGTTTGAGTTTCTATTTTACCAATTTACTCAAACGACAACATCACGCCGTAGATCGCCGAAAGATTTTAATCaca > 2:3729605/1‑89 (MQ=255) tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAg > 1:1058634/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAg > 1:93253/1‑91 (MQ=255) tGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAg < 1:2364739/91‑1 (MQ=255) cTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGTAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCa < 1:3426296/91‑1 (MQ=255) ttGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaa < 1:3534338/91‑1 (MQ=255) tGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa > 2:958704/1‑91 (MQ=255) tGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa < 1:479656/91‑1 (MQ=255) tGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa < 1:3409151/91‑1 (MQ=255) tGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa < 1:2612779/91‑1 (MQ=255) aTTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACa < 1:1562426/91‑1 (MQ=255) tttttGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACAt > 1:3899299/1‑91 (MQ=255) ttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc > 1:555661‑M2/15‑91 (MQ=255) ttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc > 1:1997280‑M2/15‑91 (MQ=255) ttttgtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc > 1:3921329‑M2/15‑91 (MQ=255) gtggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAAc > 2:451930‑M2/11‑91 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa > 1:1042184‑M2/9‑91 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa < 2:994061‑M2/83‑1 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGAAAAAACATCAAACTa > 2:2113228‑M2/9‑91 (MQ=255) ggattgcgTTTCTATTTTACCAATTTAATCAAACAAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTa < 2:268586‑M2/83‑1 (MQ=255) gattgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa < 1:39024‑M2/84‑1 (MQ=255) attgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaaa > 1:2450036‑M2/7‑91 (MQ=255) tgcgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGt < 2:2390125‑M2/87‑1 (MQ=255) cgTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTc > 2:3380411‑M2/3‑91 (MQ=255) tttCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGc < 1:96862/91‑1 (MQ=255) | AATCATGCAATATAAATAATCGACCGCAATCCACAAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGTTCGC > USA300TCH1516_ALE/920353‑920533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |