| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 802141 | 128 (0.670) | 14 (0.090) | 8/138 | NT | 10.1% | intergenic (+382/+242) | USA300HOU_RS03915/USA300HOU_RS03920 | Putative 5'(3')‑deoxyribonucleotidase/Putative lipid kinase |
| ? | USA300TCH1516_ALE | = 802168 | 139 (0.850) | intergenic (+409/+215) | USA300HOU_RS03915/USA300HOU_RS03920 | Putative 5'(3')‑deoxyribonucleotidase/Putative lipid kinase | |||||
ATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/802041‑802141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatcggatgaCGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATAAAG < USA300TCH1516_ALE/802168‑802079 ATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATCAATGTTAGTTTATCTTATTATTATA > 2:3587638/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 2:120978/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 2:120884/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 1:3842647/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 1:3842478/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 1:3842424/1‑91 TGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAA > 1:3842178/1‑91 GATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAA > 1:1148202/1‑91 GATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAA < 1:2796673/91‑1 GATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCGCAATAAATGTTAGTTTATCTTATTATTATAAA > 1:3302761/1‑91 AAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCG < 1:3723473/91‑1 AAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGG > 2:1625322/1‑91 AAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGG < 2:1268881/91‑1 AAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGG < 2:2635369/91‑1 AGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGA < 2:2367533/91‑1 AGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGA < 2:2062197/91‑1 AGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGA < 2:2367627/91‑1 AGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGA < 2:2367698/91‑1 AGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGA > 2:301589/1‑91 AATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATG > 2:2617566/1‑91 CTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATT < 2:2215543/91‑1 CTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATT < 1:3405092/91‑1 CTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATT < 2:286774/91‑1 CTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATT < 1:3658773/91‑1 CTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATT < 1:3658656/91‑1 TTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCA < 2:2428692/91‑1 TTATCATTTCCGGCCCGCTCTCAATAAATGTTAGTTTATCTTATTATGATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCA < 2:753163/91‑1 TCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGAGTAACACATTCATCCGATTT < 2:1081778/91‑1 GTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATA < 1:2825116/91‑1 CCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCAACCGATTTATAAT < 1:994713/91‑1 CGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAA < 1:2551341/91‑1 cacTAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTTTAATCTGCCATAGATTATCACATTCATCCGATTTATAATAATAAGAT < 2:3687442/88‑1 CAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGAT < 2:3687283/91‑1 ATAAATGTTAGTTTATCTTATTATTATAAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAA < 1:2947719/91‑1 AAATCGGATGACGTGTGATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGA < 2:2976752/91‑1 AAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGA < 1:867659/91‑1 AAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGA < 2:3230312/91‑1 AAATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGA < 2:2154676/91‑1 AATCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAA > 1:123080/1‑91 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGCTTTATAATCATAAGATCAACTAACATTTATTGAGAGCGGGACGGAAAT > 2:1307294/1‑91 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAAa > 2:3770065/1‑90 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAAT > 2:1306682/1‑91 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAAT > 2:2702840/1‑91 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAAT > 1:3765713/1‑91 TCGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAAT < 1:2565862/91‑1 CGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATG < 2:768266/91‑1 CGGATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATG > 1:1732047/1‑91 GATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTATCATTTATTGAGAGCGGGACGGAAATGAT < 1:1341290/91‑1 GATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGAT < 2:433159/91‑1 GATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGAT < 2:3240229/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA < 1:3451142/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA < 2:991505/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA < 2:515808/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA > 1:1971761/1‑91 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA > 2:2353325/1‑91 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA < 1:807416/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA < 1:807541/91‑1 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA > 2:2610279/1‑91 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA > 2:2499680/1‑91 ATGACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATA > 2:2353202/1‑91 TGACGTGTAATCCGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATAA > 1:2981698/1‑91 ACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGGGCGGGACGGAAATGATAAAG < 2:1057527/91‑1 ACGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATAAAG < 2:1057451/91‑1 ATGATAAAGAATCGCTACATAATCAATCATTAGTCGTTCTTTATCATTTCCGTCCCGCTCTCAATAAATGTTAGTTTATCTTATTATTATAAATCGGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/802041‑802141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatcggatgaCGTGTAATCTGCCATAGATTAACACATTCATCCGATTTATAATAATAAGATAAACTAACATTTATTGAGAGCGGGACGGAAATGATAAAG < USA300TCH1516_ALE/802168‑802079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |