| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 987447 | 117 (0.610) | 27 (0.180) | 18/128 | NT | 20.4% | intergenic (+20/+35) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 987456 | 118 (0.780) | intergenic (+29/+26) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein | |||||
Only 100 of 106 total aligned reads displayed.
ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/987342‑987447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaatcttcagtaacTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATTA < USA300TCH1516_ALE/987456‑987367 ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATA < 1:2539666/91‑1ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATA > 2:2005352/1‑91ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATA > 1:765101/1‑91ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATA < 1:1546973/91‑1 CCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAA > 1:3197872/1‑91 CCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAA > 1:3197899/1‑91 CTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAA < 2:3074300/91‑1 CTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAA < 1:1984215/91‑1 CTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAA < 2:2316409/91‑1 CTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAA > 2:1956966/1‑91 TTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAA > 2:1714017/1‑91 TGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAA < 1:3105711/91‑1 TGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAA < 2:3392261/91‑1 GATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAAT < 1:3572711/91‑1 GATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAAT > 2:1023778/1‑91 GATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAAT > 1:847025/1‑91 ATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATC < 1:2963024/91‑1 ATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATC < 1:1863555/91‑1 TATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCT < 2:1011675/91‑1 TTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTC < 2:3152873/91‑1 TACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCA < 2:1938699/91‑1 TACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCA < 2:3341733/91‑1 ACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAG > 2:1806387/1‑91 ACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAG < 1:1703523/91‑1 ACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAG < 2:1212772/91‑1 ACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAG < 2:1212062/91‑1 ACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAG < 2:847025/91‑1 CTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGT < 1:3202791/91‑1 CTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGT < 1:1985303/91‑1 TTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTA > 1:741601/1‑91 TTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTA < 2:376336/91‑1 TATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAA < 1:1293002/91‑1 TATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAA > 1:3387095/1‑91 TATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAA > 1:1135269/1‑91 TGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAAC < 2:804169/91‑1 AGTAATAGCTTAGGCTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAGACAA < 2:425940/91‑1 TAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACG < 1:944038/91‑1 AATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATATGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGT < 2:2951572/91‑1 AATAGCTTAGGATTCGGTGGACATAACGCAGTAGTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGT < 1:3179991/91‑1 ATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTT < 1:1843540/91‑1 ATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTT < 2:345221/91‑1 AGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTAC < 1:1890752/91‑1 GCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACT < 2:798100/91‑1 GCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACT < 2:797887/91‑1 GCTTAGGAGTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACT < 2:1632948/91‑1 CTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTG < 2:949197/91‑1 TTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGA < 1:842094/91‑1 TTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGA < 1:2151389/91‑1 TTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGA < 2:2822767/91‑1 TTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGA < 1:2151543/91‑1 TTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGA < 1:2150423/91‑1 TAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAA < 2:222269/91‑1 AGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAG < 1:310532/91‑1 GATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAAGGTTACTGAAGAT < 1:2975989/91‑1 GATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGAT < 2:2662754/91‑1 TTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTT < 1:3417529/91‑1 GGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAG < 2:1490940/91‑1 gGCAGTATTAGTATTCAAGGAATTTGAGGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTT < 2:878640/90‑1 GCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTC < 2:1277858/91‑1 CAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCA < 1:1130204/91‑1 TCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAAT < 2:2152270/91‑1 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG < 1:3288682/91‑1 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG < 1:1572113/91‑1 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG < 2:632973/91‑1 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG > 1:3214039/1‑91 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG < 1:315094/91‑1 AAAAATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCG < 1:3854511/91‑1 AATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAAT < 1:2228224/91‑1 ATCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATC < 1:1892248/91‑1 TCTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCC > 2:1833675/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT < 2:1644724/91‑1 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT > 1:1252189/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT > 1:1252216/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT > 1:1252667/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT > 2:3312306/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT > 2:2135355/1‑91 CTTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCT < 2:2066963/91‑1 TTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTA < 2:1174996/91‑1 TTCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTA < 2:1174734/91‑1 TCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATCCTGCGTTATGTCCACCGAATCCTAA > 1:3602682/1‑91 TCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAA > 1:2322634/1‑91 TCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAA > 1:2025048/1‑91 TCAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCCTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAA > 2:1807622/1‑91 TCAGTAACTAAAACAACGTTACTGAAGATTCTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAA > 1:800595/1‑91 CAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAG > 1:2224042/1‑91 CAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAG > 1:743802/1‑91 CAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAG > 2:3542898/1‑91 CAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAG < 1:1782941/91‑1 CAGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATACTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAG < 1:1546373/91‑1 AGTAACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGC < 1:2431661/91‑1 AACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTAT < 1:983785/91‑1 AACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTAT > 2:1268743/1‑91 AACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTAT > 2:1268758/1‑91 AACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTAT < 1:1251802/91‑1 ACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATT > 2:45491/1‑91 ACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATT > 2:695453/1‑91 ACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATT < 2:1509057/91‑1 ACTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATT > 2:1534612/1‑91 CTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATTA < 1:1905588/91‑1 CTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATTA < 2:2938246/91‑1 ACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/987342‑987447‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaatcttcagtaacTAAAACAACGTTACTGAAGATTTTTATAGTTATGCTTCAAATTTCTTGAATACTAATACTGCGTTATGTCCACCGAATCCTAAGCTATTA < USA300TCH1516_ALE/987456‑987367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |