| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 987447 | 117 (0.610) | 27 (0.180) | 18/128 | NT | 20.4% | intergenic (+20/+35) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein |
| ? | USA300TCH1516_ALE | = 987456 | 118 (0.780) | intergenic (+29/+26) | fabF/USA300HOU_RS04885 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2/hypothetical protein | |||||
Only 100 of 218 total aligned reads displayed.
GTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAGG > USA300TCH1516_ALE/987366‑987546 | gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa > 1:2363833/1‑91 (MQ=255)gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa > 1:139981/1‑91 (MQ=255)gTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTa < 2:2124514/91‑1 (MQ=255) tAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAg < 1:1905588‑M2/91‑2 (MQ=255) tAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAg < 2:2938246‑M2/91‑2 (MQ=255) aaTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgt < 2:1509057‑M2/91‑3 (MQ=255) aTAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgtt > 2:1268758‑M2/1‑88 (MQ=255) cTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactg > 1:743802‑M2/1‑84 (MQ=255) cTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactg < 1:1782941‑M2/91‑8 (MQ=255) ttAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactga > 1:2025048‑M2/1‑83 (MQ=255) ttAGGATTCGGTGGACATAACGCAGGATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactga > 1:3602682‑M2/1‑83 (MQ=255) aGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaag > 1:1252189‑M2/1‑81 (MQ=255) aGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaag > 1:1252667‑M2/1‑81 (MQ=255) aGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaag < 2:1644724‑M2/91‑11 (MQ=255) ggATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaaga > 2:1833675‑M2/1‑80 (MQ=255) aTTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatt < 1:2228224‑M2/91‑14 (MQ=255) cGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagattttt < 1:315094‑M2/91‑17 (MQ=255) gTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTc < 1:2734800/91‑1 (MQ=255) gTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTc > 1:2670461/1‑91 (MQ=255) tGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCa < 2:1771532/91‑1 (MQ=255) ggACCTAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGCAGCTCTAGTTACTGAAGATTCTTTCAg > 2:2814471/1‑91 (MQ=255) ggACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAg < 1:3852006/91‑1 (MQ=255) gACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGt > 2:156865/1‑91 (MQ=255) gACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGt > 2:1229504/1‑91 (MQ=255) aCATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGtt < 2:3021977/91‑1 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt < 2:2117224/91‑1 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt > 1:3786953/1‑91 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt > 2:3879371/1‑91 (MQ=255) aaCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCtt < 2:1302406/91‑1 (MQ=255) aCGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCttt > 1:3014499/1‑91 (MQ=255) cGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTta > 2:1436587/1‑91 (MQ=255) gCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTtat < 1:2938246/91‑1 (MQ=255) cAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTtata > 2:1001824/1‑91 (MQ=255) agtattagtattCAAGAAATTTGAAGCATAACTATACAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATAc < 2:3508262/91‑1 (MQ=255) gtattagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACt < 2:401843/91‑1 (MQ=255) attagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTaa > 1:1660526/1‑91 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg > 1:2499273/1‑91 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg > 1:391398/1‑91 (MQ=255) ttagtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAg > 2:459287/1‑91 (MQ=255) gtattCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATg > 1:3234766/1‑91 (MQ=255) attCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttga < 2:2152270‑M2/91‑41 (MQ=255) attCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAg < 2:1782941/91‑1 (MQ=255) ttCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGc < 2:3305468/91‑1 (MQ=255) aaGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGAc > 1:2110530/1‑91 (MQ=255) aGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACa < 1:1229504/91‑1 (MQ=255) aaaTTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGc > 1:1171917/1‑91 (MQ=255) aaTTTGAAGCATAACTATGAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGca < 2:414931/91‑1 (MQ=255) aTTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGcac < 1:1023109/91‑1 (MQ=255) ttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACaa < 2:3564374/91‑1 (MQ=255) ttGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACaa < 2:1171917/91‑1 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATc > 1:478181/1‑91 (MQ=255) gAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGACGAGCGACAGCACAATc > 2:2975386/1‑91 (MQ=255) aaGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCg < 1:2190436/91‑1 (MQ=255) aaGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCg > 2:1327948/1‑91 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt < 2:1919796/91‑1 (MQ=255) aGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGt > 2:1976498/1‑91 (MQ=255) gCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTc > 1:1108905/1‑91 (MQ=255) gCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTc < 1:3465958/91‑1 (MQ=255) gCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTc > 1:3208564/1‑91 (MQ=255) tAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCata > 2:195721/1‑91 (MQ=255) aaCTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCataa > 2:2280792/1‑91 (MQ=255) aCTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCataat > 2:3415385/1‑91 (MQ=255) cTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCataata > 1:2422865/1‑91 (MQ=255) aaaaTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaata < 1:1386546/91‑1 (MQ=255) aTCTTCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatc < 2:2662754‑M2/91‑71 (MQ=255) aTCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataa > 1:2062879/1‑91 (MQ=255) aTCTTCAGTAACCTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatc < 1:2975989‑M2/91‑71 (MQ=255) cTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAataaaatataaaa > 2:2384372/1‑91 (MQ=255) tCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaa < 1:2150423‑M2/91‑75 (MQ=255) tCAGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaa < 1:2151543‑M2/91‑75 (MQ=255) aGTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagc < 2:798100‑M2/91‑77 (MQ=255) aGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatt < 1:2906755/91‑1 (MQ=255) aGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatt > 2:2239485/1‑91 (MQ=255) aGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatt > 2:2481632/1‑91 (MQ=255) gTAACGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagct < 1:1890752‑M2/91‑78 (MQ=255) gTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTTTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtattt > 2:664263/1‑91 (MQ=255) gTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtattt < 1:922644/91‑1 (MQ=255) tAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtattta < 1:1436587/91‑1 (MQ=255) taCGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatttat < 2:3838955/90‑1 (MQ=255) aaCGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctat < 2:345221‑M2/91‑80 (MQ=255) aCGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactactactgcgttatgtccaccgaatcctaagctatt < 1:3179991‑M2/91‑81 (MQ=255) aCGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAGAtatttatt > 1:1743336/1‑91 (MQ=255) aCGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAAtatttatt < 2:3763953/91‑1 (MQ=255) cGTTGTTTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctatta < 1:944038‑M2/91‑82 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta > 1:1565776/1‑91 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta < 1:653703/91‑1 (MQ=255) cGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATttatta < 2:1069230/91‑1 (MQ=255) gttgttTTAGTTACTTAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa < 1:588690/91‑1 (MQ=255) gttgttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa > 2:737498/1‑91 (MQ=255) gttgttTAAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaa < 1:1933032/91‑1 (MQ=255) gttTTAgttactgaagatttttatagttatgcttcaaatttcttgaatactaatactgcgttatgtccaccgaatcctaagctattactca < 2:804169‑M2/91‑86 (MQ=255) gttTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataa < 1:3525351/91‑1 (MQ=255) ttttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataat > 1:3321093/1‑91 (MQ=255) tttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataata < 2:368023/91‑1 (MQ=255) ttAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATtaataataa > 1:1520433/1‑91 (MQ=255) tAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAg < 2:3197872/91‑1 (MQ=255) tAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAg < 2:1402542/91‑1 (MQ=255) tAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAg < 1:327874/91‑1 (MQ=255) tAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAg > 1:1653065/1‑91 (MQ=255) aGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAgg < 1:826648/91‑1 (MQ=255) | GTAATAGCTTAGGATTCGGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAACTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCAGTTTCTTTATACTAAGATGAGCGACAGCACAATCGTCATAATAAAATATAAAATATTTATTAATAATAAGG > USA300TCH1516_ALE/987366‑987546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |