| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1021264 = | 173 (0.910) | 9 (0.050) | 6/144 | NT | 6.2% | coding (871/1176 nt) | ugtP | Processive diacylglycerol beta‑glucosyltransferase |
| ? | USA300TCH1516_ALE | 1021300 = | 118 (0.690) | coding (835/1176 nt) | ugtP | Processive diacylglycerol beta‑glucosyltransferase | |||||
TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/1021360‑1021264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTG > USA300TCH1516_ALE/1021300‑1021389 TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAG < 1:1500497/91‑1TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAG > 2:997633/1‑91TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAG < 2:3021693/91‑1TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAG > 2:157906/1‑91 TGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGG < 2:614355/91‑1 TGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGG < 2:613484/91‑1 TGATTCTAGGTTATACCAAACACATGAAGGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGG < 1:1438396/91‑1 GATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGT > 1:2249426/1‑91 GATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGT > 2:2198917/1‑91 GATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGT > 1:521717/1‑91 ATTCTAGGTTATACCAAACACATGAATGAATGGGTGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTT < 1:3176280/91‑1 ATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTT < 2:2255047/91‑1 TCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTC > 2:1761842/1‑91 CTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCG > 1:3198981/1‑91 CTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCG > 1:796585/1‑91 GGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAA > 1:2118647/1‑91 TTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACC > 1:2433410/1‑91 ACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTA > 1:943722/1‑91 GAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGA > 1:997775/1‑91 GAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGA > 1:2108574/1‑91 GAAACCTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGA > 1:997790/1‑91 CTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAA > 1:469356/1‑91 CTGGTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTCGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAA > 1:3079868/1‑91 GTGGTATCACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATAC > 1:3133109/1‑91 ACAATAACTGAAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGT > 2:1118450/1‑91 AGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAAC < 1:380748/91‑1 AGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAAC < 1:380568/91‑1 AGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAAC > 1:3625478/1‑91 GGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACT > 2:15592/1‑91 GGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACT > 1:1960793/1‑91 GGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACT < 1:2450779/91‑1 GGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACT < 1:3708904/91‑1 GTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTT < 1:3689611/91‑1 TTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTA < 1:3206366/91‑1 TTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTA < 2:3082929/91‑1 TTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAG < 2:2706740/91‑1 TCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGC > 2:1646855/1‑91 TCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGC > 2:325107/1‑91 CGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCT > 1:268659/1‑91 CGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCT > 1:2360575/1‑91 CGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCT > 1:268602/1‑91 GTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTG > 1:72412/1‑91 TTGATTCTAGGTTATACCAAACACATGAATGAATGGATGGCATCAAGTCAACTTATGATTACGAAACCTGGTGGTATCACAATAACTGAAGGTTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/1021360‑1021264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTG > USA300TCH1516_ALE/1021300‑1021389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |