BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	1021264 =	173 (0.910)	9 (0.050)	6/144	NT	6.2%	coding (871/1176 nt)	ugtP	Processive diacylglycerol beta‑glucosyltransferase
*	?	USA300TCH1516_ALE	1021300 =	118 (0.690)	9 (0.050)	6/144	NT	6.2%	coding (835/1176 nt)	ugtP	Processive diacylglycerol beta‑glucosyltransferase

Only 100 of 183 total aligned reads displayed.

TTTCAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTGT  >  USA300TCH1516_ALE/1021210‑1021390

taggttataccaaacacatgaatgaatggatggcatcaagtcaacttatgattaCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGt                                                                                            >  1:943722‑M1/55‑91 (MQ=255)

 ttCAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTa                                                                                           >  2:1813728/1‑91 (MQ=255)

  ggttataccaaacacatgaatgaatggatggcatcaagtcaacttatgattaCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTaa                                                                                          >  1:2433410‑M1/53‑91 (MQ=255)

   cAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAAt                                                                                         <  1:1094751/91‑1 (MQ=255)

   cAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAAt                                                                                         >  2:2049895/1‑91 (MQ=255)

   cAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAAt                                                                                         >  1:1226221/1‑91 (MQ=255)

     aGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCa                                                                                       <  1:1559508/91‑1 (MQ=255)

      gCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCAt                                                                                      <  1:2919388/91‑1 (MQ=255)

       ctctTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATa                                                                                     <  1:3536966/91‑1 (MQ=255)

          ttGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGt                                                                                  >  1:2191766/1‑91 (MQ=255)

           tGAGCAGGTACAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGtt                                                                                 <  1:3487804/91‑1 (MQ=255)

             aCCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGa                                                                               >  2:2838566/1‑91 (MQ=255)

               cAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACt                                                                             <  1:2235943/91‑1 (MQ=255)

               cAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACt                                                                             <  1:2234793/91‑1 (MQ=255)

                 ggTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTg                                                                           >  1:2979264/1‑91 (MQ=255)

                 ggTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTg                                                                           >  1:2980844/1‑91 (MQ=255)

                  gTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGAc                                                                              <  2:2361860/87‑1 (MQ=255)

                  gTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGAc                                                                              >  1:2361860/1‑87 (MQ=255)

                  gTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACATGa                                                                          >  1:3052853/1‑91 (MQ=255)

                     cAGGATTTAGGAAAATCATTGGAATCCAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGc                                                                       <  1:3606826/91‑1 (MQ=255)

                     cAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGc                                                                       <  1:1413563/91‑1 (MQ=255)

                     cAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTGCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGc                                                                       <  2:3412811/91‑1 (MQ=255)

                      aGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGcc                                                                      >  1:738080/1‑91 (MQ=255)

                       ggATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGcca                                                                     >  1:466422/1‑91 (MQ=255)

                        gATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGccat                                                                    <  2:231964/91‑1 (MQ=255)

                        gATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGccat                                                                    >  2:2282217/1‑91 (MQ=255)

                        gATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGccat                                                                    <  2:1957808/91‑1 (MQ=255)

                         aTTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGccatc                                                                   >  1:142496/1‑91 (MQ=255)

                         aTTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGccatc                                                                   >  2:1384782/1‑91 (MQ=255)

                             aGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcatt                                                               <  2:3250277/91‑1 (MQ=255)

                             aGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGGGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcatt                                                               <  1:3875106/91‑1 (MQ=255)

                              ggAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcattc                                                              >  2:3157511/1‑91 (MQ=255)

                                aaaaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcattcat                                                            <  1:2526865/91‑1 (MQ=255)

                                 aaaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcattcatt                                                           >  1:314163/1‑91 (MQ=255)

                                 aaaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcattcatt                                                           >  1:2028079/1‑91 (MQ=255)

                                 aaaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCcattcatt                                                           <  1:3575182/91‑1 (MQ=255)

                                  aaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCattcattc                                                          <  1:2104777/91‑1 (MQ=255)

                                  aaTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCattcattc                                                          <  2:2028441/91‑1 (MQ=255)

                                   aTCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCAttcattca                                                         >  1:2706740/1‑91 (MQ=255)

                                    tCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATtcattcat                                                        <  2:2140609/91‑1 (MQ=255)

                                      aTTGGAATATAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCAtgt                                                      <  1:3719697/91‑1 (MQ=255)

                                      aTTGGAATATAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCAtgt                                                      <  1:3719451/91‑1 (MQ=255)

                                      aTTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCAtgt                                                      >  2:3195941/1‑91 (MQ=255)

                                      aTTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCAtgt                                                      <  2:3662587/91‑1 (MQ=255)

                                            aTACAACGGGCGAAACTTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTgg                                                <  2:3713107/91‑1 (MQ=255)

                                            aTACAACGGGCGAAACGTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTgg                                                <  2:3712970/91‑1 (MQ=255)

                                            aTACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTgg                                                >  1:1379712/1‑91 (MQ=255)

                                              aCAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGta                                              >  1:1006962/1‑91 (MQ=255)

                                               cAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGtat                                             >  2:2648017/1‑91 (MQ=255)

                                                aaCGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGtata                                            >  1:3254690/1‑91 (MQ=255)

                                                 aCGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATaa                                           <  1:3632774/91‑1 (MQ=255)

                                                 aCGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATaa                                           <  1:154626/91‑1 (MQ=255)

                                                   ttaCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAAcc                                         >  1:2118647‑M1/4‑91 (MQ=255)

                                                   gggCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAAcc                                         >  1:562411/1‑91 (MQ=255)

                                                   gggCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAAcc                                         >  1:2304185/1‑91 (MQ=255)

                                                      CGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAg                                      >  1:796585‑M1/1‑91 (MQ=255)

                                                       gaaacctggtggtatcacaataactgaaggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGa                                     >  1:997790‑M2/36‑91 (MQ=255)

                                                         AACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAAt                                   <  2:2255047‑M1/91‑1 (MQ=255)

                                                         AACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCACCCATTCATTCATGTGTTTGGTATAACCTAGAAt                                   <  1:3176280‑M1/91‑1 (MQ=255)

                                                          ACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATc                                  >  1:521717‑M1/1‑91 (MQ=255)

                                                          ACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATc                                  >  2:2198917‑M1/1‑91 (MQ=255)

                                                           CCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCCTTCATGTGTTTGGTATAACCTAGAATCa                                 <  1:1438396‑M1/91‑1 (MQ=255)

                                                           CCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCa                                 <  2:614355‑M1/91‑1 (MQ=255)

                                                            CTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCaa                                >  2:157906‑M1/1‑91 (MQ=255)

                                                            CTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCaa                                <  2:3021693‑M1/91‑1 (MQ=255)

                                                            CTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCaa                                <  1:1500497‑M1/91‑1 (MQ=255)

                                                              tCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATa                              >  2:3352300/1‑91 (MQ=255)

                                                               gtggtatcacaataactgaaggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATAc                             >  1:3133109‑M2/28‑91 (MQ=255)

                                                               cAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATAc                             >  2:1531075/1‑91 (MQ=255)

                                                                aGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACa                            <  2:529996/91‑1 (MQ=255)

                                                                 gTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACAt                           >  1:960681/1‑91 (MQ=255)

                                                                 gTTATTGTGATACCACCAGGTTGCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACAt                           <  2:3121193/91‑1 (MQ=255)

                                                                   tATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATtc                         <  2:169274/91‑1 (MQ=255)

                                                                   tATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATtc                         <  2:1745277/91‑1 (MQ=255)

                                                                    aTTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATtct                        <  2:314733/91‑1 (MQ=255)

                                                                    aTTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATtct                        >  1:1645167/1‑91 (MQ=255)

                                                                      tgtgATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCg                      >  2:2353948/1‑91 (MQ=255)

                                                                       gtgATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGt                     >  1:2873190/1‑91 (MQ=255)

                                                                       acaataactgaaggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGt                     >  2:1118450‑M2/20‑91 (MQ=255)

                                                                          ctACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAg                  >  2:1005016/2‑91 (MQ=255)

                                                                          aTACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAg                  >  2:800120/1‑91 (MQ=255)

                                                                          aTACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAg                  >  1:2546167/1‑91 (MQ=255)

                                                                           tACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGa                 <  2:896985/91‑1 (MQ=255)

                                                                            accaccAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGAt                >  2:2654942/1‑91 (MQ=255)

                                                                             ccaccaGGTTTCGTAATCATAAGTTGACTTTATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGAtt               <  2:1185436/91‑1 (MQ=255)

                                                                               accaGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTa             <  1:3658608/91‑1 (MQ=255)

                                                                               accaGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTa             >  1:2134304/1‑91 (MQ=255)

                                                                                ccaGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTAATTCATATGTTTGGTATAACCTAGACGCAATACATACTCGTTAGATTTaa            >  2:3603584/1‑91 (MQ=255)

                                                                                 caGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTaaa           >  2:2359149/1‑91 (MQ=255)

                                                                                  aggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAAc          <  1:380568‑M2/83‑1 (MQ=255)

                                                                                   ggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACt         <  1:2450779‑M2/84‑1 (MQ=255)

                                                                                   ggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACt         >  1:1960793‑M2/8‑91 (MQ=255)

                                                                                   ggtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACt         >  2:15592‑M2/8‑91 (MQ=255)

                                                                                    gtttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACtt        <  1:3689611‑M2/85‑1 (MQ=255)

                                                                                     tttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTa       <  1:3206366‑M2/86‑1 (MQ=255)

                                                                                     tttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTa       <  2:3082929‑M2/86‑1 (MQ=255)

                                                                                      ttcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAg      <  2:2706740‑M2/87‑1 (MQ=255)

                                                                                       tcgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGc     >  2:325107‑M2/4‑91 (MQ=255)

                                                                                        cgTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCt    >  1:268602‑M2/3‑91 (MQ=255)

                                                                                         gTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTg   >  1:72412‑M2/2‑91 (MQ=255)

TTTCAAGCTCTTGACCAGGTGCAGGATTTAGGAAAATCATTGGAATACAACGGGCGAAACCTTCAGTTATTGTGATACCACCAGGTTTCGTAATCATAAGTTGACTTGATGCCATCCATTCATTCATGTGTTTGGTATAACCTAGAATCAATACATTCTCGTTAGATTTAAACTTAGCTGT  >  USA300TCH1516_ALE/1021210‑1021390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.