| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2218211 = | 208 (1.090) | 16 (0.110) | 11/124 | NT | 10.4% | intergenic (+4/+55) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | 2218261 = | 116 (0.790) | intergenic (+54/+5) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 119 total aligned reads displayed.
GTCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2218318‑2218211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCT > USA300TCH1516_ALE/2218261‑2218350 GTCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATA > 2:2563217/1‑91GTCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATA > 2:2563680/1‑91 TCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAA < 2:1011287/91‑1 TCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAA < 2:2392874/91‑1 CAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAAT > 1:881750/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAACAAAAAAAAACATTCAACTTTTTAATGGTTTGGCATAAT > 1:1693442/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATC > 1:3096797/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATC > 1:3113217/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATC > 1:2986763/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATC > 2:2450435/1‑91 AACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATC > 2:54468/1‑91 ACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATGAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCT < 2:2990105/91‑1 ACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCT > 2:3316884/1‑91 ACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCT > 2:3317087/1‑91 CTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTT < 1:733240/91‑1 CTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTT < 1:733267/91‑1 CTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTT > 2:773625/1‑91 CTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTT < 1:1193335/91‑1 CTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTT < 1:733526/91‑1 TTGATTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTT < 2:1093788/91‑1 GCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGA < 2:881750/91‑1 TTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAAT > 2:3023898/1‑91 TTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAAT > 1:112449/1‑91 TTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAAT > 1:2193006/1‑91 TTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAAT > 2:3335007/1‑91 TGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATG < 2:2494371/91‑1 TGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATG < 2:945247/91‑1 TGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATG < 1:1353000/91‑1 GTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAGAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGT > 2:3476002/1‑91 GTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGT < 1:709800/91‑1 TGTGAACTTACATTTGCAATTCAAGATGTAAACTAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT < 1:3315120/91‑1 TGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT > 2:2196481/1‑91 TGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT < 2:329478/91‑1 TGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT > 1:540717/1‑91 TGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTCTGAATGTTTTTT > 2:3225367/1‑91 CATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATT > 1:1617776/1‑91 AAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTT‑‑‑‑‑‑TTTTATTTTACATCTTGAATTGCAA > 2:2278429/1‑91 GATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATT > 1:3265003/1‑91 TAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTA > 2:1643670/1‑91 AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCA > 1:2487205/1‑91 AAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACA > 1:1366531/1‑91 AACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTA > 1:232708/1‑91 AACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTA > 1:232859/1‑91 CATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTTTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACA > 2:2263072/1‑91 CATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATATAAGTTCACAACTACA > 2:3716821/1‑91 ATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAA > 2:2854696/1‑91 TTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAG > 1:1517872/1‑91 TCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTGTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGC > 1:3081550/1‑91 AAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAG > 1:3828230/1‑91 AAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAG > 1:3828261/1‑91 AATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTT < 2:3203851/91‑1 AATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTT < 1:329478/91‑1 ATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTT < 2:3862861/91‑1 TCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTA < 1:3035980/91‑1 TTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGC < 1:1295519/91‑1 TTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCA > 1:1474946/1‑91 TTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCA > 1:1037958/1‑91 TTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCA > 1:3035256/1‑91 TTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCA > 1:2429353/1‑91 TTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCGTTAGCA > 1:3036621/1‑91 TGAATGTTTTTTTTGTTTTTTTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT > 2:3624324/1‑91 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 2:1617776/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 2:351036/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 1:3664047/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 1:3664659/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT > 2:549501/1‑91 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT > 1:3046347/1‑91 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 2:1470229/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT > 2:1370891/1‑91 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 1:2269756/91‑1 TGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 1:198067/91‑1 TGAATGTGTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAT < 1:1927128/91‑1 GAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATT < 1:1119668/91‑1 AATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTA > 1:1762910/1‑91 AATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTA > 2:2247219/1‑91 AATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTA > 2:2247135/1‑91 ATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTAC > 1:774233/1‑91 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTATGTTCACAACTACAAGCAAGTTTACCATCGACAGTTGCTTTAGCATTACC > 2:650098/1‑91 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACC < 2:3046347/91‑1 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACC < 2:3072527/91‑1 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACC < 2:2867528/91‑1 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACC < 1:143253/91‑1 TGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGC > 1:1213942/1‑79 GTTTTTTTTTTTTTTTTTTACATCTTGAATTGCAAATGTAAGTTCACAACTTCAAGCATGTTTACCATCGACAGTAACTTTACCATTtctt > 2:72097/1‑87 GTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCT < 2:1581278/91‑1 TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTT < 2:437382/91‑1 TTTTTTTTGTTTTATTTGACATCTTGAATTGCTAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTT < 1:3325690/91‑1 TTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTT > 2:2179909/1‑91 TTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTT > 1:571407/1‑91 TTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTAC < 2:3471881/91‑1 TTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTAC < 2:449085/91‑1 TTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTAC > 1:679582/1‑91 TTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTAC < 2:100685/91‑1 TTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTAC < 2:9262/91‑1 TTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACC > 2:2933578/1‑91 TTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACC > 2:2930270/1‑91 TTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACC < 2:1151207/91‑1 TTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCT < 1:3823606/91‑1 TTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCACCGACAGTAGCTTTAGCATTACCTTTACCT > 1:3106687/1‑91 TTTGTTTTATTTTACATCTTGAATTGCAAATGCAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACATTTACCT > 2:3450313/1‑91 GTCAACTTGCTTGTAGTTGTGAACTTACATTTGCAATTCAAGATGTAAAATAAAAC‑AAAAAAAACATTCAAAGATTTAATGTGTTGGCATAATCTTTGAATGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2218318‑2218211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCT > USA300TCH1516_ALE/2218261‑2218350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |