| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2218211 = | 208 (1.090) | 16 (0.110) | 11/124 | NT | 10.4% | intergenic (+4/+55) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | 2218261 = | 116 (0.790) | intergenic (+54/+5) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 263 total aligned reads displayed.
TAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCTA > USA300TCH1516_ALE/2218171‑2218351 | tgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttt > 1:2487205‑M1/40‑91 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttt > 2:3552929/1‑91 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttt < 2:2532102/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gt < 2:3398172/91‑1 (MQ=255) aaaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gtttt > 1:2738844/1‑91 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gtttta > 2:143253/1‑91 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gttttatt < 2:2659648/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAAT‑AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gttttattt > 1:2763618/1‑91 (MQ=255) catttgcaattcaagatgtaaaataaaacaaaaaaaacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑Gttttatt > 1:1617776‑M2/82‑91 (MQ=255) tAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gttttatttt > 2:952467/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑Gttttatttta > 1:2284231/1‑91 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTAc > 1:2858753/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACa > 1:100685/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACa < 2:1203220/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACAt < 2:3023553/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACAt < 2:770686/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACAt < 1:2676642/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACAt < 1:2524948/91‑1 (MQ=255) aattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATc > 1:3265003‑M1/25‑91 (MQ=255) tGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCtt < 2:1847849/91‑1 (MQ=255) gAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTg < 1:3068206/91‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGa < 1:1837396/91‑1 (MQ=255) aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAAt > 1:241317/1‑91 (MQ=255) gatgtaaaataaaacaaaaaaaacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAAtt > 1:3265072‑M2/68‑91 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAAtt > 2:1575091/1‑91 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAAtt > 1:1400258/1‑91 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGc < 1:1908408/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGc > 2:856742/1‑91 (MQ=255) tAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCa < 1:2948815/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa < 1:201508/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa < 2:1370091/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa < 1:3841540/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATAGCaaa > 2:3571715/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATg > 1:890846/1‑91 (MQ=255) taaaacaaaaaaaacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTa > 2:1643670‑M2/59‑91 (MQ=255) agTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTa > 1:1581278/1‑91 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGt > 2:3104322/1‑91 (MQ=255) aataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTc < 1:152977/91‑1 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca < 1:1092707/91‑1 (MQ=255) ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca < 1:1747826/91‑1 (MQ=255) aaaaaacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 1:1366531‑M2/51‑91 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 2:2196481‑M1/1‑91 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTAGTTTACATCTTGAATTGCAAATGTAAGTTcaca < 1:3315120‑M1/91‑1 (MQ=255) aacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTa > 1:232859‑M2/47‑91 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc < 1:709800‑M1/91‑1 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTCTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc > 2:3476002‑M1/1‑91 (MQ=255) cattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑TTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAca > 2:2263072‑M2/45‑91 (MQ=255) cattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATATAAGTTCACAACTAca > 2:3716821‑M2/45‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 1:112449‑M1/1‑91 (MQ=255) ttcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag > 1:1517872‑M2/43‑91 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaatcaa < 2:1093788‑M1/91‑1 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag < 1:733526‑M1/91‑1 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt > 2:3316884‑M1/1‑91 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTCATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt < 2:2990105‑M1/91‑1 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:54468‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3113217‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3096797‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:2450435‑M1/1‑91 (MQ=255) ATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTg > 1:2182622‑M1/1‑91 (MQ=255) ATTATGCCAAACCATTAAAAAGTTGAATGTTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:1693442‑M1/1‑91 (MQ=255) TATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc > 1:1305212‑M1/1‑91 (MQ=255) TATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc > 2:2563680‑M1/1‑91 (MQ=255) aTGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAcc > 1:671830/1‑91 (MQ=255) tGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCa < 2:683232/91‑1 (MQ=255) gCCAACACATTAAATCTTTGAATGTTTTTTTT‑TTTTTTTTTTACACATTGAATTGCAAATGTAAGTTTACAACTACTAGCAAGTTGACCAt > 2:2366477/1‑91 (MQ=255) gCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCACATGTAAGTTCACAACTACAAGCAAGTTGACCAt > 1:460629/1‑91 (MQ=255) gCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt > 1:3372813/1‑91 (MQ=255) gCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt > 2:324634/1‑91 (MQ=255) cAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCg > 2:885590/1‑91 (MQ=255) aaCACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa < 2:2066836/91‑1 (MQ=255) acacATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGAc > 1:2582205/1‑91 (MQ=255) caTTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTTTATTTTTAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt > 2:2758217/1‑91 (MQ=255) caTTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 2:2177559/91‑1 (MQ=255) ttAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAg < 2:559641/91‑1 (MQ=255) aatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCtt < 2:3203851‑M2/73‑1 (MQ=255) ttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCa > 1:1474946‑M2/14‑91 (MQ=255) ttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCa > 1:1037958‑M2/14‑91 (MQ=255) ttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCa > 1:3035256‑M2/14‑91 (MQ=255) ttGAATGTTTTTTTT‑TTTTTATTTTACATTTTTAATTGCAATTGTAATTTCACAACTACAAGCAAGTTTACCATCGACAGTAGCTTTAGCa > 2:163682/1‑91 (MQ=255) tgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt > 1:3046347‑M2/13‑91 (MQ=255) tgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 2:2284231‑M2/79‑1 (MQ=255) tgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 1:3664047‑M2/79‑1 (MQ=255) tgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 2:1470229‑M2/79‑1 (MQ=255) tgaatgtgttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 1:1927128‑M2/79‑1 (MQ=255) aatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtta > 2:3870812‑M2/11‑91 (MQ=255) tgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTATGTTCACAACTACAAGCAAGTTTACCATCGACAGTTGCTTTAGCAttacc > 2:650098‑M2/9‑91 (MQ=255) tgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGc > 1:1213942‑M2/9‑79 (MQ=255) tgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacc < 2:3046347‑M2/83‑1 (MQ=255) tgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacc < 2:2867528‑M2/83‑1 (MQ=255) gttttttTT‑TTTTTTTTTTACATCTTGAATTGCAAATGTAAGTTCACAACTTCAAGCATGTTTACCATCGACAGTAACTTTaccatttctt > 2:72097‑M2/8‑87 (MQ=255) ttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctt < 2:437382‑M2/85‑1 (MQ=255) tttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttaccttt > 1:571407‑M2/6‑91 (MQ=255) ttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttaccttta < 1:3795091‑M2/87‑1 (MQ=255) tttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttac < 2:100685‑M2/88‑1 (MQ=255) tttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttac < 1:861703‑M2/88‑1 (MQ=255) tttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttac < 2:3471881‑M2/88‑1 (MQ=255) ttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacc < 2:1151207‑M2/89‑1 (MQ=255) ttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacc > 2:2930270‑M2/3‑91 (MQ=255) tTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacct < 1:3823606‑M2/90‑1 (MQ=255) tTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacct > 2:1975267‑M2/2‑91 (MQ=255) | TAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCTA > USA300TCH1516_ALE/2218171‑2218351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |