| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | 1040 = | 1454 (0.120) | 291 (0.030) | 36/124 | NT | 15.8% | coding (155/192 nt) | USA300HOU_RS15665 | hypothetical protein |
| ? | NC_012417 | 1090 = | 1977 (0.210) | coding (105/192 nt) | USA300HOU_RS15665 | hypothetical protein | |||||
Only 100 of 18920 total aligned reads displayed.
CCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTT > NC_012417/950‑1131 | ccGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTCTAAAAAAGTACT > 2:3223709‑M1/1‑91 (MQ=255)ccGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACT < 1:127182‑M1/91‑1 (MQ=255)aagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttt < 2:3715745‑M1/1‑1 (MQ=255) tgccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTg < 2:439379‑M1/2‑1 (MQ=255) cGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTG < 2:3868804‑M1/91‑1 (MQ=255) agccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTg < 1:512667‑M1/2‑1 (MQ=255) agccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTg < 1:2287767‑M1/2‑1 (MQ=255) agccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTg < 2:632830‑M1/2‑1 (MQ=255) gcccgaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt > 1:3123895‑M1/89‑91 (MQ=255) gccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt < 2:2773952‑M1/3‑1 (MQ=255) gccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt < 2:2921630‑M1/3‑1 (MQ=255) gccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt > 2:3078416‑M1/89‑91 (MQ=255) gccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt < 1:580871‑M1/3‑1 (MQ=255) gccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGt < 1:2501558‑M1/3‑1 (MQ=255) gCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGT < 1:1935171‑M1/91‑1 (MQ=255) ccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTc > 1:3740627‑M1/88‑91 (MQ=255) ccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTc < 2:349344‑M1/4‑1 (MQ=255) ccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTc > 2:2631068‑M1/88‑91 (MQ=255) cagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCt < 2:1775175‑M1/5‑1 (MQ=255) cagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCt > 2:846713‑M1/87‑91 (MQ=255) aagacagtacttttttataaaaaatcaacaaaaaagacattagtgttgactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCt < 2:3158081‑M2/32‑1 (MQ=255) aaTTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT > 2:1539879‑M1/1‑91 (MQ=255) aaTTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT > 1:1869827‑M1/1‑91 (MQ=255) aaTTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 1:652431‑M1/91‑1 (MQ=255) aaTTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCT < 1:152931‑M1/91‑1 (MQ=255) agaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCtt < 2:1337604‑M1/6‑1 (MQ=255) ggAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTT > 2:1071796‑M1/1‑91 (MQ=255) ggAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTT > 1:3348711‑M1/1‑91 (MQ=255) gAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTT > 1:2921630‑M1/1‑91 (MQ=255) aaTTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTT > 1:3202976‑M1/1‑91 (MQ=255) aTTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTG > 1:1199116‑M1/1‑91 (MQ=255) tttCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGT < 1:3671993‑M1/91‑1 (MQ=255) caggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtgt < 1:1461851‑M1/14‑1 (MQ=255) ttCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTG < 1:179995‑M1/91‑1 (MQ=255) ttCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTG < 1:1384336‑M1/91‑1 (MQ=255) aggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtgtg > 2:3787511‑M1/77‑91 (MQ=255) gggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGAc < 1:1068652‑M1/17‑1 (MQ=255) gggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGAc > 1:2432904‑M1/75‑91 (MQ=255) ggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttgtgtgacacaatatattgcgtgTGTCTTATTTTTGTGACa > 2:147099‑M1/74‑91 (MQ=255) gAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA > 1:3805514‑M1/1‑91 (MQ=255) aaaaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacata < 1:789766‑M1/91‑8 (MQ=255) aaattATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt > 2:1977997‑M2/6‑91 (MQ=255) aaattATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt > 1:3475201‑M2/6‑91 (MQ=255) aaattATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt < 1:3053567‑M2/86‑1 (MQ=255) attATTATTTAAGAGATTAGTGTTGACTAATGTCTTTTTTGTTAAAAAAAAAAAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat < 2:1134142‑M2/88‑1 (MQ=255) attATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat > 2:3003043‑M2/4‑91 (MQ=255) attATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat < 1:1657786‑M2/88‑1 (MQ=255) ttATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatg < 1:1595289‑M2/89‑1 (MQ=255) ttATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatg < 2:2846014‑M2/89‑1 (MQ=255) tATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGt < 2:562438‑M2/91‑2 (MQ=255) tATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGt < 1:2570450‑M2/91‑2 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg > 2:256100‑M2/1‑89 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg > 2:3424936‑M2/1‑89 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgt > 1:857286‑M2/1‑88 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgt > 1:35399‑M2/1‑88 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgt > 2:2420401‑M2/1‑88 (MQ=255) tgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGACAAATGCTGGATGTAGTGTcac > 1:2983807‑M1/54‑91 (MQ=255) aGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgtcaca < 1:340312‑M1/91‑22 (MQ=255) gACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgtcacaa < 1:2638435‑M1/91‑23 (MQ=255) gACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgtcacaa < 1:444578‑M1/91‑23 (MQ=255) acattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaa > 1:2147646‑M2/24‑91 (MQ=255) acattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaa > 2:782037‑M2/24‑91 (MQ=255) attagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaaa > 2:1398490‑M2/22‑91 (MQ=255) attagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaaa > 1:2790839‑M2/22‑91 (MQ=255) tAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTTTTTCAAATGCTGTATGTAGtgtcacaaaaata < 2:708975‑M2/91‑14 (MQ=255) tAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgtcacaaaaata > 2:2193318‑M1/1‑64 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 1:2005743‑M2/91‑16 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 2:2051191‑M2/91‑16 (MQ=255) gtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac > 1:3869654‑M2/1‑74 (MQ=255) gtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac < 1:3278196‑M2/91‑18 (MQ=255) gtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagac > 1:2716310‑M2/1‑74 (MQ=255) gACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTTTGACAAATTCTGTATGTAGTGTCACAAAAATAAGACaaa > 2:503917/1‑91 (MQ=255) ctaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACg < 2:2127388‑M2/81‑1 (MQ=255) ctaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACg < 2:1276177‑M2/81‑1 (MQ=255) atgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCaa > 2:2341903‑M2/8‑91 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 1:1000628‑M2/91‑3 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 2:929500‑M2/91‑3 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg > 1:925716‑M2/1‑89 (MQ=255) tgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgt < 1:2855897‑M2/91‑4 (MQ=255) gttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtc < 1:2214243‑M2/91‑5 (MQ=255) ttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtca < 2:120514‑M2/91‑6 (MQ=255) ttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtca < 1:994513‑M2/91‑6 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcaca < 1:1723373‑M1/91‑54 (MQ=255) aTTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaa < 1:1327156‑M2/91‑9 (MQ=255) ataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataag < 2:1845999‑M2/91‑16 (MQ=255) ataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGAATGTAGTGTCACATAAATAAGACAAACTCAATATATTGtgtcacaaatatatg < 1:3608611‑M2/91‑16 (MQ=255) taAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACCCAATATATTGcgtcacaaaaataaga < 2:3362761‑M2/91‑17 (MQ=255) aaaaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagac > 2:2708910‑M2/1‑74 (MQ=255) aaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtctcaaaaataagacag > 2:3299008‑M2/1‑72 (MQ=255) aaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacag > 1:2076992‑M2/1‑72 (MQ=255) aaaaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacag > 2:3648951‑M2/1‑72 (MQ=255) aGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagtac > 1:723416‑M2/1‑69 (MQ=255) tACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAg > 1:1128161/1‑91 (MQ=255) tACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAg < 2:2275181/91‑1 (MQ=255) cTGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtactttt < 1:2357974‑M1/91‑73 (MQ=255) cTGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtactttt > 2:1616540‑M1/1‑19 (MQ=255) cTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTCCAGCt > 2:3580077/1‑91 (MQ=255) tGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtacttttt < 2:2492759‑M1/91‑74 (MQ=255) TGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCtt < 2:1691500‑M1/91‑1 (MQ=255) TGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCtt < 2:1917216‑M1/91‑1 (MQ=255) | CCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTT > NC_012417/950‑1131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |