| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 371234 | 159 (0.830) | 28 (0.160) | 14/150 | NT | 14.9% | coding (707/1362 nt) | ylbJ | Sporulation integral membrane protein YlbJ |
| ? | USA300TCH1516_ALE | = 371261 | 171 (0.960) | coding (680/1362 nt) | ylbJ | Sporulation integral membrane protein YlbJ | |||||
Only 100 of 247 total aligned reads displayed.
GGTAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCTTAT > USA300TCH1516_ALE/371144‑371324 | ggTAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTT > 1:3011792‑M1/1‑91 (MQ=255)ggTAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTT > 2:1092959‑M1/1‑91 (MQ=255) gTAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGtttt > 1:2440832/1‑91 (MQ=255) tAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTa > 1:3728404/1‑91 (MQ=255) tAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTa > 1:2390000/1‑91 (MQ=255) aGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAg > 2:1223062/1‑91 (MQ=255) gCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGc < 2:3358804/91‑1 (MQ=255) aTGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTCAAGTTTTAGCAAc > 1:234178/1‑91 (MQ=255) aTGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAAc > 1:3598320/1‑91 (MQ=255) tGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACg < 1:1223645/91‑1 (MQ=255) tGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACg < 2:1458120/91‑1 (MQ=255) gTAATTGTAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATaa < 1:1931333/91‑1 (MQ=255) gTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaactttta < 1:2638830‑M1/91‑13 (MQ=255) ttGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTtagcaacttttatgat > 1:210161‑M1/1‑75 (MQ=255) gCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATaa > 2:1866065/1‑91 (MQ=255) cAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATaaa < 1:2556484/91‑1 (MQ=255) gTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAg > 1:127217/1‑91 (MQ=255) gTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAg < 1:649524/91‑1 (MQ=255) aCGACAAATGTGATGACTAAAGTTATCCAAGAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTg < 2:701937/91‑1 (MQ=255) aCGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTg < 1:818940/91‑1 (MQ=255) aCGACAAATGTGATGACTAAAGTTACCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTg < 2:1142616/91‑1 (MQ=255) cGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTtagcaacttttatgattatcgttgc < 2:210161‑M1/91‑26 (MQ=255) cGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGc < 1:1243715/91‑1 (MQ=255) gACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgct < 2:3737346‑M1/91‑27 (MQ=255) gACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgct < 2:3738674‑M1/91‑27 (MQ=255) gACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgct < 2:1992644‑M1/91‑27 (MQ=255) gACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCt < 1:113977/91‑1 (MQ=255) gACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCt < 1:1838729/91‑1 (MQ=255) aCAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgcta < 1:2155881‑M1/91‑28 (MQ=255) aCAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgcta < 2:1496525‑M1/91‑28 (MQ=255) aCAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTg > 1:3130481/1‑91 (MQ=255) cAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgttaa < 2:880237‑M1/91‑29 (MQ=255) cAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgctaa < 2:370471‑M1/91‑29 (MQ=255) cAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGa > 2:3024306‑M2/1‑90 (MQ=255) cAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGa < 1:3348133‑M2/91‑2 (MQ=255) aTGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGaaac > 2:461323‑M2/1‑87 (MQ=255) tgtgATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGaaact > 1:2254993‑M2/1‑86 (MQ=255) gtgATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTg < 2:542865/91‑1 (MQ=255) gggatgatGAAAGTTATCCAAATGTATAGATTCCCATGCGGCATTAATCCGAAAGTTTTAGCAGCGATAATCATAAGAGTTGCTGAAACTg < 2:3619258/89‑1 (MQ=255) gatgaCTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgctaaaacttta < 1:1859885‑M1/91‑36 (MQ=255) atgaCTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTg < 2:1603224/91‑1 (MQ=255) aCTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGaaa < 2:3598320/91‑1 (MQ=255) cTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgctaaaactttaggatt < 1:1621618‑M1/91‑41 (MQ=255) cTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgctaaaactttaggatt < 1:1621697‑M1/91‑41 (MQ=255) tAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAg < 1:1817411/91‑1 (MQ=255) tAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAg < 1:2143135/91‑1 (MQ=255) aaaGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGc > 2:1705864/1‑91 (MQ=255) aaaGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGc < 1:3835888/91‑1 (MQ=255) aGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCa > 1:298306/1‑91 (MQ=255) gTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAg > 1:2630084/1‑91 (MQ=255) ttATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGt < 2:1030214/91‑1 (MQ=255) ttATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGt < 1:912395/91‑1 (MQ=255) tATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTc < 1:2907915/91‑1 (MQ=255) tCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGc > 2:1830516/1‑91 (MQ=255) cAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCaa < 1:1260719/91‑1 (MQ=255) aaaaGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCt < 2:2488542/65‑1 (MQ=255) aaaaGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCt > 1:2488542/1‑65 (MQ=255) aaaaGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCaat > 2:2826553/1‑91 (MQ=255) aaaaGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCaat > 2:3560448/1‑91 (MQ=255) aaaGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCaata > 1:798465/1‑91 (MQ=255) aGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCCGAAACTGTTGAAAAGCCAGTCGCaataat < 2:3011775/91‑1 (MQ=255) gTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATc < 2:3766012/91‑1 (MQ=255) ataAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGt > 2:3044108/1‑91 (MQ=255) aaaTTCCAATGCGGCATTAATCCTAAAGTTTcagcaacttttatgattatcgttgctaaaactttaggattaatgccgcattggaatttat < 1:2094808‑M1/91‑61 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc > 2:2891049/1‑91 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc < 2:2243255/91‑1 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc > 2:1808743/1‑91 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc < 1:3416013/91‑1 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc < 2:1124339/91‑1 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGc > 1:857658/1‑91 (MQ=255) aaTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTAAAAAGCCAGTCGCAATAATCGTGGc > 1:3618626/1‑91 (MQ=255) aTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCt < 1:885744/91‑1 (MQ=255) aTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCt < 1:476753/91‑1 (MQ=255) aTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCt < 2:3172963/91‑1 (MQ=255) aTTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGACGCAATAATCGTGGCt > 2:3717516/1‑91 (MQ=255) ccAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTtct < 2:1491100/91‑1 (MQ=255) cAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTtctc < 1:2250583/91‑1 (MQ=255) aaTGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCg < 1:1092959/91‑1 (MQ=255) tGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGtt < 2:431555/91‑1 (MQ=255) cGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTttg < 2:1809315/91‑1 (MQ=255) ggCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTttgt > 2:1120964/1‑91 (MQ=255) cATTTATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTttgttg > 2:586409/1‑91 (MQ=255) cATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTttgttg < 2:3130481/91‑1 (MQ=255) ttAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTa < 1:3338732/91‑1 (MQ=255) tAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTAc < 2:1426291/91‑1 (MQ=255) aTCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACAt > 2:2576077/1‑91 (MQ=255) aTCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACAt > 1:1853264/1‑91 (MQ=255) ccTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATcc > 2:2317636/1‑91 (MQ=255) cTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATccc > 1:2790422/1‑91 (MQ=255) cTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATccc > 1:3437643/1‑91 (MQ=255) cTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATccc < 1:3075971/91‑1 (MQ=255) aaGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTg > 1:2738966/1‑91 (MQ=255) aGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGc < 1:1778367/91‑1 (MQ=255) ttttAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCtt > 1:258106/1‑91 (MQ=255) ttttAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCtt > 1:350706/1‑91 (MQ=255) tttAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCTta < 1:1046603/91‑1 (MQ=255) ttAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCTtat < 2:3380676/91‑1 (MQ=255) tcagcaacttttatgattatcgttgctaaaactttaggattaatgccgcattggaatttatacttttggataactttagtcatcacatttg < 1:3810011‑M1/91‑91 (MQ=255) tcagcaacttttatgattatcgttgctaaaactttaggattaatgccgcattggaatttatacttttggataactttagtcatcacatttg < 2:3289630‑M1/91‑91 (MQ=255) tcagcaacttttatgattatcgttgctaaaactttaggattaatgccgcattggaatttatacttttggataactttagtcatcacatttg < 1:1878322‑M1/91‑91 (MQ=255) | GGTAGCCATGCAGTAATTGCAGTCACGACAAATGTGATGACTAAAGTTATCCAAAAGTATAAATTCCAATGCGGCATTAATCCTAAAGTTTTAGCAACGATAATCATAAAAGTTGCTGAAACTGTTGAAAAGCCAGTCGCAATAATCGTGGCTTCTCGTTTGTTGTACATCCCTTGCTTAT > USA300TCH1516_ALE/371144‑371324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |