| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 393597 | 136 (0.710) | 11 (0.070) | 6/142 | NT | 7.9% | intergenic (+20/+40) | USA300HOU_RS01800/USA300HOU_RS01805 | NAD(P)H‑dependent FAD/FMN reductase/hypothetical protein |
| ? | USA300TCH1516_ALE | = 393621 | 135 (0.800) | intergenic (+44/+16) | USA300HOU_RS01800/USA300HOU_RS01805 | NAD(P)H‑dependent FAD/FMN reductase/hypothetical protein | |||||
Only 100 of 276 total aligned reads displayed.
AATCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGCATAT > USA300TCH1516_ALE/393507‑393687 | gcttatgacaatcattattacctcaatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTc < 1:3637581‑M1/9‑1 (MQ=255)gcttatgacaatcattattacctcaatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTc < 2:516439‑M1/9‑1 (MQ=255)gcttatgacaatcattattacctcaatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTc > 1:257832‑M1/83‑91 (MQ=255) tCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCgg > 2:2008682/1‑91 (MQ=255) tCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCgg < 1:3685460/91‑1 (MQ=255) cacaATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGca < 1:1877015/91‑1 (MQ=255) caATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcaca < 2:1671699/91‑1 (MQ=255) caATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGcaca > 1:1575626/1‑91 (MQ=255) aaTGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCacac < 1:2683384/91‑1 (MQ=255) tGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTa < 2:1133901/91‑1 (MQ=255) tGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTa > 1:491734/1‑91 (MQ=255) gAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAAt > 2:1758924/1‑91 (MQ=255) aaCTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAAtt < 2:2429234/91‑1 (MQ=255) aCTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAAttt > 2:661757/1‑91 (MQ=255) cTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTg < 2:944242/91‑1 (MQ=255) tGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGt < 2:2406626/91‑1 (MQ=255) cAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAg < 2:3318566/91‑1 (MQ=255) ctctatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTGAATTTGTAAgtg > 1:3001872‑M1/62‑91 (MQ=255) aaGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAgtg < 2:2094776/91‑1 (MQ=255) aGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAgtgt > 1:2178054/1‑91 (MQ=255) tACGACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgcc < 1:3126021‑M1/91‑25 (MQ=255) aatatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGttt > 1:625242‑M1/59‑91 (MQ=255) acaacaacaAGTGTTTGAAGAAGAAAACGACCAATACGACTTTTAAAGTATAAAAATAAGGCGCTCGGCACACTAAGTTTGTAAGTGTTTg > 2:1257384‑M2/1‑90 (MQ=255) tatgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGa > 1:1908403‑M1/57‑91 (MQ=255) atgcttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAg > 1:3828681‑M1/56‑91 (MQ=255) aacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTACATTTGTAAGTGTTTgag < 1:3323810‑M2/91‑4 (MQ=255) aacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgag < 1:32967‑M2/91‑4 (MQ=255) aacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgag > 1:392779‑M2/1‑88 (MQ=255) aacaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgag > 1:439158‑M2/1‑88 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc < 1:2764585‑M2/91‑5 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc > 2:1642454‑M2/1‑87 (MQ=255) acaacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagc < 2:3779212‑M2/91‑5 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTaa < 1:423333/80‑1 (MQ=255) caacaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTaa > 2:423333/1‑80 (MQ=255) cttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGt > 1:3586303‑M1/53‑91 (MQ=255) cttgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGt > 1:1981866‑M1/53‑91 (MQ=255) acaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccgagcgtc < 1:1827072‑M1/91‑32 (MQ=255) acaaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccgagcgtc < 1:722429‑M1/91‑32 (MQ=255) tgtcatcacttgcctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCt > 1:900557‑M1/51‑91 (MQ=255) aaGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcg < 1:2846396‑M2/87‑6 (MQ=255) aGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCttt < 2:2057660/91‑1 (MQ=255) gtgtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccgagcgtcttat < 1:76325‑M1/91‑36 (MQ=255) gtgtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCtttt > 1:2390279/1‑91 (MQ=255) taactGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTc < 2:2272114/87‑1 (MQ=255) gtTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCa > 2:1824264/1‑91 (MQ=255) ttGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCata > 2:324870/1‑91 (MQ=255) ttGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCata < 2:741635/91‑1 (MQ=255) gaagaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttat < 1:2935749‑M1/91‑42 (MQ=255) aagaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAAt > 2:2209537/1‑61 (MQ=255) gaagaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAAc > 2:328173/1‑91 (MQ=255) cctttatcgtcgttcattggctatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAg < 1:519451‑M1/36‑1 (MQ=255) agaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACta < 2:1941661/91‑1 (MQ=255) gaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtat < 1:1689215/91‑1 (MQ=255) gaaAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtat > 1:2458071/1‑91 (MQ=255) atcgtcgttcattggcgatatagttaatatgaaAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatat > 2:2980364‑M1/34‑91 (MQ=255) aaaCAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatat > 2:2550139/1‑91 (MQ=255) aacaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatata > 1:171415/1‑91 (MQ=255) aacaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatata < 1:3478625/91‑1 (MQ=255) aacaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACtatata > 1:2894659/1‑91 (MQ=255) acaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAg > 2:3844949/1‑91 (MQ=255) acaacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAg > 1:1204802/1‑91 (MQ=255) caacCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGc > 2:3612478/1‑91 (MQ=255) acCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCATTTCATATTAACTATATAGCCa > 2:3127487/1‑91 (MQ=255) cAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAAt > 2:2623110/1‑91 (MQ=255) gACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacga > 2:1746589/1‑91 (MQ=255) gACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacga > 2:1994177/1‑91 (MQ=255) aCTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacgac > 2:1402730/1‑91 (MQ=255) cTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAacgacg > 2:2562003/1‑91 (MQ=255) tAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATaa > 1:1486527/1‑91 (MQ=255) aaGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAg > 2:1234762/1‑91 (MQ=255) aGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAgg > 2:3407015/1‑91 (MQ=255) ataAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCaa < 1:1314144/91‑1 (MQ=255) taAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAg < 1:1103347/91‑1 (MQ=255) aaaaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGt < 2:3581662/91‑1 (MQ=255) aaaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtg > 2:2591680/1‑91 (MQ=255) aaaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtg < 1:3844949/91‑1 (MQ=255) aaaTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtga < 2:107385/91‑1 (MQ=255) aTAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGtgatg > 2:851947/1‑91 (MQ=255) aaGACGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacactt > 1:3676565‑M1/1‑9 (MQ=255) aaGACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacactt < 2:3752058‑M2/91‑59 (MQ=255) AAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGAc < 1:2130866‑M1/91‑1 (MQ=255) AAGACGCGCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCGAGTGATGAc > 1:1950558‑M1/1‑91 (MQ=255) gACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgt < 1:1291704‑M2/91‑61 (MQ=255) gACGCTCGGCACACTAAATTTGTAAGTGTTTgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgt < 1:2347971‑M2/91‑61 (MQ=255) GACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACaa > 2:1471193‑M1/1‑91 (MQ=255) aCGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgtt > 2:973071‑M1/1‑6 (MQ=255) aCGCTCaaacacttacaaatttagtgtgccgagcgtcttacttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgtt > 2:3186759‑M1/1‑6 (MQ=255) ACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAg > 1:2792494‑M1/1‑91 (MQ=255) ACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAg < 1:208442‑M1/91‑1 (MQ=255) ACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAg > 2:471166‑M1/1‑91 (MQ=255) cGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttg > 1:106743‑M1/1‑5 (MQ=255) cGCTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacactt > 2:2846396‑M1/1‑5 (MQ=255) CGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGc > 1:2263409‑M1/1‑91 (MQ=255) CGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACGATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGc > 1:990769‑M1/1‑91 (MQ=255) cTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgtt < 1:3173815‑M1/91‑89 (MQ=255) cTCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgtt > 2:2358249‑M1/1‑3 (MQ=255) cTCaaacacttacaaatgtagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgtt < 1:3322257‑M1/91‑89 (MQ=255) CTCGGCACACAACGTTAGTAAGAGTTTGAGCGCCTATGCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGTCAAGCat < 2:1167664‑M1/91‑1 (MQ=255) tCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg > 1:2913828‑M1/1‑2 (MQ=255) tCaaacacttacaaatttagtgtgccgagcgtcttatttttatactttaaaagtcgtattggttgttttcttcttcaaacacttgttgttg < 1:1284082‑M1/91‑90 (MQ=255) | AATCCACAATGCGAACTGCCAAAGTACAACAACAAGTGTTTGAAGAAGAAAACAACCAATACGACTTTTAAAGTATAAAAATAAGACGCTCGGCACACTAAATTTGTAAGTGTTTGAGCGTCTTTTCATATTAACTATATAGCCAATGAACGACGATAAAGGCAAGTGATGACAAGCATAT > USA300TCH1516_ALE/393507‑393687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |