| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 412131 = | 181 (0.950) | 13 (0.080) | 8/144 | NT | 7.6% | coding (1028/1161 nt) | metC | Cystathionine beta‑lyase MetC |
| ? | USA300TCH1516_ALE | 412165 = | 152 (0.890) | coding (994/1161 nt) | metC | Cystathionine beta‑lyase MetC | |||||
Only 100 of 236 total aligned reads displayed.
TTTAATGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACGAGTG > USA300TCH1516_ALE/412041‑412221 | tttAATGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGCTACCACGTTCtt > 2:3803948/1‑91 (MQ=255)tttAATGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCtt > 1:1195435/1‑91 (MQ=255)tttAATGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCtt > 1:1900046/1‑91 (MQ=255)aagcacaacaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaat > 2:3179328‑M1/91‑91 (MQ=255) agcacaacaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTg > 2:75417‑M1/90‑91 (MQ=255) aaTGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGtc < 2:850589/91‑1 (MQ=255) aaTGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGtc < 1:1978236/91‑1 (MQ=255) acaacaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGtct < 2:3532431‑M1/5‑1 (MQ=255) acaacaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGtct < 2:2051290‑M1/5‑1 (MQ=255) acaacaatttgtcgacgcactgacattaccactcgtttcagtgagtctgggcggtgttcaaacgatcctttcagatccagcaacaaTGtct < 1:3315930‑M1/5‑1 (MQ=255) aTGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGtct < 2:2334039/91‑1 (MQ=255) aTGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGtct > 2:3555714/1‑91 (MQ=255) aTGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGtct < 2:1575725/91‑1 (MQ=255) caacaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGtctc > 2:276085‑M1/86‑91 (MQ=255) gCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCa > 2:562868/1‑91 (MQ=255) gCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCa > 2:514454/1‑91 (MQ=255) cGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCAc < 1:2139236/91‑1 (MQ=255) acaatttgtcgatgcactgacattaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGTCTCAc < 2:2040574‑M1/8‑1 (MQ=255) gTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCAct > 2:936443/1‑91 (MQ=255) tATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCActt > 1:410063/1‑91 (MQ=255) aTGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAg < 2:2859396/91‑1 (MQ=255) aTGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAg > 1:3675714/1‑91 (MQ=255) aTGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAg < 2:3428558/91‑1 (MQ=255) tGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAgg > 2:1328120/1‑91 (MQ=255) tGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAgg < 1:2785364/91‑1 (MQ=255) tGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAgg < 1:3555714/91‑1 (MQ=255) gTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGt > 2:1775957/1‑91 (MQ=255) cTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAg < 2:2125271/91‑1 (MQ=255) cTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAg < 1:946008/91‑1 (MQ=255) tGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGt > 1:3385907/1‑91 (MQ=255) tGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGt > 2:273867/1‑91 (MQ=255) cAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGc < 2:3206799/91‑1 (MQ=255) gAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCg > 1:2154618/1‑91 (MQ=255) aGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGt < 1:3018740/91‑1 (MQ=255) gTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTg > 1:1752885/1‑91 (MQ=255) ttaccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGTCTCACTTCTTCAGGTAGTGCAGCGTga > 2:3463095‑M1/62‑91 (MQ=255) taccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGTCTCACTTCTTCAGGTAGTGCAGCGTgag > 1:2411605‑M1/61‑91 (MQ=255) taccactcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGTCTCACTTCTTCAGGTAGTGCAGCGTgag > 1:1616618‑M1/61‑91 (MQ=255) ccgctcgtttcagtgagtctgggcggtgttgaaacgatcctttcacatccagcaacaaTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc > 2:2715190‑M1/59‑91 (MQ=255) atcaGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc > 1:616589/1‑91 (MQ=255) atcaGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc < 2:1154808/91‑1 (MQ=255) atcaGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc > 2:828821/1‑91 (MQ=255) caGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACAt > 1:2901610/1‑91 (MQ=255) ggATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACAttg < 2:776619/91‑1 (MQ=255) ggATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACAttg < 1:1273271/91‑1 (MQ=255) tCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACAttgttg < 1:465550/91‑1 (MQ=255) ttCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCACCTAGTGCAGCCTGAGACATTGTTGCt > 2:3364777/1‑91 (MQ=255) ttCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCACATAGTGCAGCCTGAGACTTTGTTGCt > 2:3365078/1‑91 (MQ=255) tCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTg < 1:756064/91‑1 (MQ=255) cGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc > 1:3754694/1‑80 (MQ=255) cGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGAc < 2:3754694/80‑1 (MQ=255) cGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTgg > 2:25519/1‑91 (MQ=255) gagaCCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGa > 2:3315930/1‑91 (MQ=255) gaCCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACa > 2:949747/1‑78 (MQ=255) gaCCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGAtg > 2:1738129/1‑91 (MQ=255) aCCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGAtgt < 2:1710956/91‑1 (MQ=255) ccAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGAtgtg > 1:3146567/1‑91 (MQ=255) ccAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGAtgtg > 1:3144736/1‑91 (MQ=255) aaCACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGaa > 1:201426/1‑91 (MQ=255) acacTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGaaa > 2:3137359/1‑91 (MQ=255) acacTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGaaa > 2:1121333/1‑91 (MQ=255) acacTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGaaa < 1:2556886/91‑1 (MQ=255) acacTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGaaa > 1:875471/1‑91 (MQ=255) cTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGa < 1:1191197/91‑1 (MQ=255) cTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGa < 2:1900046/91‑1 (MQ=255) cTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCGCACTGCTTCAGGTAGGGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGa < 2:1554618/91‑1 (MQ=255) tAATCGGAATAGACCGAAAGTGATACCACGTTCTTGCCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATc < 2:3825869/91‑1 (MQ=255) aTCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGt > 1:3294617/1‑91 (MQ=255) aTCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGt > 2:1498518/1‑91 (MQ=255) aTCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGt > 1:3586703/1‑91 (MQ=255) aTCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGt > 2:287385/1‑91 (MQ=255) tCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGtt > 1:705626/1‑91 (MQ=255) tCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAACGATcctt < 1:1062620/91‑4 (MQ=255) ggAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTc > 2:932284/1‑91 (MQ=255) gAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCa < 1:1554419/91‑1 (MQ=255) aaTAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCaa > 2:524418/1‑91 (MQ=255) gcccGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACTTTGTTGCTGGATGTGAAAGGACCGTTTCAACAcc > 2:3872330/3‑91 (MQ=255) gACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACAcc > 2:1291933/1‑91 (MQ=255) gACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACAcc > 1:1219832/1‑91 (MQ=255) gACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACAcc > 1:2545712/1‑91 (MQ=255) aCCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCg > 1:1503293/1‑91 (MQ=255) ccGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGc < 1:3626119/91‑1 (MQ=255) cGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGcc < 1:1220050/91‑1 (MQ=255) gAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTCTCAACACCGccc < 1:2980864/91‑1 (MQ=255) aaaGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCa < 2:1195435/91‑1 (MQ=255) gTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGAc > 2:885135/1‑91 (MQ=255) gTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGAc < 1:3419370/91‑1 (MQ=255) tACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCAc > 1:961438/1‑91 (MQ=255) ccACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTg < 2:1104731/91‑1 (MQ=255) cACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGa < 2:3049332/91‑1 (MQ=255) cACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGa < 1:1775957/91‑1 (MQ=255) aCGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGaa < 2:428307/91‑1 (MQ=255) cGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGaaa < 2:2087647/91‑1 (MQ=255) cGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGaaa > 1:2312410/1‑91 (MQ=255) gTTCTTGTCTCACTTCTGCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAAc < 1:2050170/91‑1 (MQ=255) ttCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACg < 2:2677169/91‑1 (MQ=255) ttCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACg > 2:1435552/1‑91 (MQ=255) cTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACGAg > 2:218054/1‑91 (MQ=255) ttGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACGAGt > 1:2687449/1‑91 (MQ=255) TGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACGAGTg > 1:3504227‑M1/1‑91 (MQ=255) | TTTAATGCGTATTTGATGTCTGCAATGAGTTCATCAGGATCTTCGAGACCAACACTTAATCGGAATAGACCGAAAGTGATACCACGTTCTTGTCTCACTTCTTCAGGTAGTGCAGCGTGAGACATTGTTGCTGGATGTGAAAGGATCGTTTCAACACCGCCCAGACTCACTGAAACGAGTG > USA300TCH1516_ALE/412041‑412221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |